RNA–Protein interactions for RNA: ENST00000428680.6

CNOT4-206, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 1 (best) BASIC

Gene CNOT4, Length 4,642 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-206ENST00000428680 FAM72CH0Y354 149 aa6.9□□□□□ -1.31
CNOT4-206ENST00000428680 H7C0S8 307 aa6.9□□□□□ -1.31
CNOT4-206ENST00000428680 RAD1O60671 282 aa6.9□□□□□ -1.31
CNOT4-206ENST00000428680 PRAMEF2O60811 474 aa6.9□□□□□ -1.31
CNOT4-206ENST00000428680 OLFM2O95897 454 aa6.9□□□□□ -1.31
CNOT4-206ENST00000428680 CD79AP11912 226 aa6.9□□□□□ -1.31
CNOT4-206ENST00000428680 DSTNP60981 165 aa6.9□□□□□ -1.31
CNOT4-206ENST00000428680 DCTN2Q13561 401 aaKnown RBP6.9□□□□□ -1.31
CNOT4-206ENST00000428680 EFR3AQ14156 821 aa6.9□□□□□ -1.31
CNOT4-206ENST00000428680 CLCA4Q14CN2 919 aa6.9□□□□□ -1.31
CNOT4-206ENST00000428680 TIGD6Q17RP2 521 aa6.9□□□□□ -1.31
CNOT4-206ENST00000428680 NKPD1Q17RQ9 610 aa6.9□□□□□ -1.31
CNOT4-206ENST00000428680 ACSBG2Q5FVE4 666 aa6.9□□□□□ -1.31
CNOT4-206ENST00000428680 FAM72AQ5TYM5 149 aa6.9□□□□□ -1.31
CNOT4-206ENST00000428680 FAM72DQ6L9T8 149 aa6.9□□□□□ -1.31
CNOT4-206ENST00000428680 ZNF572Q7Z3I7 529 aaPredicted RBP6.9□□□□□ -1.31
CNOT4-206ENST00000428680 GLRX5Q86SX6 157 aa6.9□□□□□ -1.31
CNOT4-206ENST00000428680 FAM72BQ86X60 149 aa6.9□□□□□ -1.31
CNOT4-206ENST00000428680 FAM86B1Q8N7N1 296 aa6.9□□□□□ -1.31
CNOT4-206ENST00000428680 OR2L5Q8NG80 312 aa6.9□□□□□ -1.31
CNOT4-206ENST00000428680 TBC1D20Q96BZ9 403 aa6.9□□□□□ -1.31
CNOT4-206ENST00000428680 B3GNT4Q9C0J1 378 aa6.9□□□□□ -1.31
CNOT4-206ENST00000428680 C14orf105Q9NVL8 296 aa6.9□□□□□ -1.31
CNOT4-206ENST00000428680 DHCR7Q9UBM7 475 aaKnown RBP6.9□□□□□ -1.31
CNOT4-206ENST00000428680 ZNF229Q9UJW7 825 aa6.9□□□□□ -1.31
CNOT4-206ENST00000428680 WASF3Q9UPY6 502 aa6.9□□□□□ -1.31
CNOT4-206ENST00000428680 PCDHGB1Q9Y5G3 927 aa6.9□□□□□ -1.31
CNOT4-206ENST00000428680 PDCD11Q14690 1871 aaKnown RBP6.89□□□□□ -1.31
CNOT4-206ENST00000428680 FEZF1A0PJY2 475 aa6.89□□□□□ -1.31
CNOT4-206ENST00000428680 ABLIM1O14639 778 aa6.89□□□□□ -1.31
CNOT4-206ENST00000428680 TNFRSF10CO14798 259 aa6.89□□□□□ -1.31
CNOT4-206ENST00000428680 ATE1O95260 518 aa6.89□□□□□ -1.31
CNOT4-206ENST00000428680 IFNA6P05013 189 aa6.89□□□□□ -1.31
CNOT4-206ENST00000428680 ABHD2P08910 425 aa6.89□□□□□ -1.31
CNOT4-206ENST00000428680 MYL9P24844 172 aa6.89□□□□□ -1.31
CNOT4-206ENST00000428680 ADPRHP54922 357 aa6.89□□□□□ -1.31
CNOT4-206ENST00000428680 TAP2Q03519 686 aa6.89□□□□□ -1.31
CNOT4-206ENST00000428680 GRIK2Q13002 908 aa6.89□□□□□ -1.31
CNOT4-206ENST00000428680 IER5LQ5T953 404 aa6.89□□□□□ -1.31
CNOT4-206ENST00000428680 EEF1A1P5Q5VTE0 462 aa6.89□□□□□ -1.31
CNOT4-206ENST00000428680 TMPRSS11AQ6ZMR5 421 aa6.89□□□□□ -1.31
CNOT4-206ENST00000428680 TMEM200AQ86VY9 491 aa6.89□□□□□ -1.31
CNOT4-206ENST00000428680 RPS19BP1Q86WX3 136 aaKnown RBP6.89□□□□□ -1.31
CNOT4-206ENST00000428680 SVOPQ8N4V2 548 aa6.89□□□□□ -1.31
CNOT4-206ENST00000428680 OR8S1Q8NH09 359 aa6.89□□□□□ -1.31
CNOT4-206ENST00000428680 DOK4Q8TEW6 326 aa6.89□□□□□ -1.31
CNOT4-206ENST00000428680 KHSRPQ92945 711 aaKnown RBP eCLIP6.89□□□□□ -1.319e-7■■■■□ 20.1
CNOT4-206ENST00000428680 OMA1Q96E52 524 aa6.89□□□□□ -1.31
CNOT4-206ENST00000428680 CDK15Q96Q40 435 aa6.89□□□□□ -1.31
CNOT4-206ENST00000428680 TAAR9Q96RI9 348 aa6.89□□□□□ -1.31
CNOT4-206ENST00000428680 MMADHCQ9H3L0 296 aaPredicted RBP6.89□□□□□ -1.31
CNOT4-206ENST00000428680 PCDHB16Q9NRJ7 776 aa6.89□□□□□ -1.31
CNOT4-206ENST00000428680 DKK3Q9UBP4 350 aa6.89□□□□□ -1.31
CNOT4-206ENST00000428680 SLC2A6Q9UGQ3 507 aa6.89□□□□□ -1.31
CNOT4-206ENST00000428680 CDH22Q9UJ99 828 aa6.89□□□□□ -1.31
CNOT4-206ENST00000428680 FADS3Q9Y5Q0 445 aa6.89□□□□□ -1.31
CNOT4-206ENST00000428680 FADS2P1A8MWK0 482 aa6.89□□□□□ -1.31
CNOT4-206ENST00000428680 PTGES3LE9PB15 166 aa6.89□□□□□ -1.31
CNOT4-206ENST00000428680 WRBO00258 174 aa6.89□□□□□ -1.31
CNOT4-206ENST00000428680 ACTL6BO94805 426 aa6.89□□□□□ -1.31
CNOT4-206ENST00000428680 ZNF35P13682 527 aa6.89□□□□□ -1.31
CNOT4-206ENST00000428680 HNRNPH3P31942 346 aaKnown RBP6.89□□□□□ -1.31
CNOT4-206ENST00000428680 RAB25P57735 213 aa6.89□□□□□ -1.31
CNOT4-206ENST00000428680 PLK5Q496M5 336 aa6.89□□□□□ -1.31
CNOT4-206ENST00000428680 NKAIN1Q4KMZ8 207 aa6.89□□□□□ -1.31
CNOT4-206ENST00000428680 HSD11B1LQ7Z5J1 315 aa6.89□□□□□ -1.31
CNOT4-206ENST00000428680 SATL1Q86VE3 508 aa6.89□□□□□ -1.31
CNOT4-206ENST00000428680 IQCKQ8N0W5 287 aa6.89□□□□□ -1.31
CNOT4-206ENST00000428680 ZNF433Q8N7K0 673 aaPredicted RBP6.89□□□□□ -1.31
CNOT4-206ENST00000428680 ZNF283Q8N7M2 679 aa6.89□□□□□ -1.31
CNOT4-206ENST00000428680 GALNT6Q8NCL4 622 aa6.89□□□□□ -1.31
CNOT4-206ENST00000428680 NAT14Q8WUY8 206 aa6.89□□□□□ -1.31
CNOT4-206ENST00000428680 SLC35A5Q9BS91 424 aa6.89□□□□□ -1.31
CNOT4-206ENST00000428680 LRRC3Q9BY71 257 aa6.89□□□□□ -1.31
CNOT4-206ENST00000428680 TRIM4Q9C037 500 aa6.89□□□□□ -1.31
CNOT4-206ENST00000428680 HDHD2Q9H0R4 259 aa6.89□□□□□ -1.31
CNOT4-206ENST00000428680 SPAG4Q9NPE6 437 aa6.89□□□□□ -1.31
CNOT4-206ENST00000428680 SLC35C2Q9NQQ7 365 aa6.89□□□□□ -1.31
CNOT4-206ENST00000428680 GALPQ9UBC7 116 aa6.89□□□□□ -1.31
CNOT4-206ENST00000428680 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP6.89□□□□□ -1.31
CNOT4-206ENST00000428680 LINC00854A0A1B0GVQ3 168 aa6.89□□□□□ -1.31
CNOT4-206ENST00000428680 C11orf98E9PRG8 122 aa6.89□□□□□ -1.31
CNOT4-206ENST00000428680 SGK494L7N484 410 aa6.89□□□□□ -1.31
CNOT4-206ENST00000428680 EIF1AYO14602 144 aaKnown RBP6.89□□□□□ -1.31
CNOT4-206ENST00000428680 DVL2O14641 736 aa6.89□□□□□ -1.31
CNOT4-206ENST00000428680 ADORA3P0DMS8 318 aa6.89□□□□□ -1.31
CNOT4-206ENST00000428680 C7P10643 843 aa6.89□□□□□ -1.31
CNOT4-206ENST00000428680 BMP6P22004 513 aa6.89□□□□□ -1.31
CNOT4-206ENST00000428680 EEF1A1P68104 462 aaKnown RBP6.89□□□□□ -1.31
CNOT4-206ENST00000428680 ZNF844Q08AG5 666 aa6.89□□□□□ -1.31
CNOT4-206ENST00000428680 PDE7AQ13946 482 aa6.89□□□□□ -1.31
CNOT4-206ENST00000428680 DDI2Q5TDH0 399 aa6.89□□□□□ -1.31
CNOT4-206ENST00000428680 LIMS2Q7Z4I7 341 aa6.89□□□□□ -1.31
CNOT4-206ENST00000428680 FGF11Q92914 225 aa6.89□□□□□ -1.31
CNOT4-206ENST00000428680 HDAC8Q9BY41 377 aa6.89□□□□□ -1.31
CNOT4-206ENST00000428680 FARSBQ9NSD9 589 aaKnown RBP6.89□□□□□ -1.31
CNOT4-206ENST00000428680 MSRB2Q9Y3D2 182 aa6.89□□□□□ -1.31
CNOT4-206ENST00000428680 A0A1B0GW55 424 aa6.89□□□□□ -1.31
CNOT4-206ENST00000428680 FOXE1O00358 373 aaPredicted RBP6.89□□□□□ -1.31
CNOT4-206ENST00000428680 BIRC5O15392 142 aa6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms