RNA–Protein interactions for RNA: ENST00000428574.6

NR1I3-209, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1I3, Length 1,117 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-209ENST00000428574 SPIDRQ14159 915 aa8.56□□□□□ -1.04
NR1I3-209ENST00000428574 RCN1Q15293 331 aa8.56□□□□□ -1.04
NR1I3-209ENST00000428574 RGNQ15493 299 aa8.56□□□□□ -1.04
NR1I3-209ENST00000428574 CYP51A1Q16850 503 aa8.56□□□□□ -1.04
NR1I3-209ENST00000428574 VMACQ2NL98 169 aa8.56□□□□□ -1.04
NR1I3-209ENST00000428574 INTS11Q5TA45 600 aaKnown RBP8.56□□□□□ -1.04
NR1I3-209ENST00000428574 PRAMEF8Q5VWM4 474 aa8.56□□□□□ -1.04
NR1I3-209ENST00000428574 PRAMEF7Q5VXH5 474 aa8.56□□□□□ -1.04
NR1I3-209ENST00000428574 ANKRD26P1Q6NSI1 321 aa8.56□□□□□ -1.04
NR1I3-209ENST00000428574 PDSS2Q86YH6 399 aa8.56□□□□□ -1.04
NR1I3-209ENST00000428574 CA13Q8N1Q1 262 aa8.56□□□□□ -1.04
NR1I3-209ENST00000428574 EID2Q8N6I1 236 aa8.56□□□□□ -1.04
NR1I3-209ENST00000428574 C11orf65Q8NCR3 313 aa8.56□□□□□ -1.04
NR1I3-209ENST00000428574 OR10A6Q8NH74 314 aa8.56□□□□□ -1.04
NR1I3-209ENST00000428574 ZCCHC10Q8TBK6 192 aa8.56□□□□□ -1.04
NR1I3-209ENST00000428574 IFI44Q8TCB0 444 aa8.56□□□□□ -1.04
NR1I3-209ENST00000428574 ZNF675Q8TD23 568 aa8.56□□□□□ -1.04
NR1I3-209ENST00000428574 SLC26A7Q8TE54 656 aa8.56□□□□□ -1.04
NR1I3-209ENST00000428574 NCLNQ969V3 563 aa8.56□□□□□ -1.04
NR1I3-209ENST00000428574 RSRC1Q96IZ7 334 aaKnown RBP8.56□□□□□ -1.04
NR1I3-209ENST00000428574 NSMCE2Q96MF7 247 aa8.56□□□□□ -1.04
NR1I3-209ENST00000428574 ZNF578Q96N58 590 aaPredicted RBP8.56□□□□□ -1.04
NR1I3-209ENST00000428574 BBS4Q96RK4 519 aa8.56□□□□□ -1.04
NR1I3-209ENST00000428574 MAPKAP1Q9BPZ7 522 aa8.56□□□□□ -1.04
NR1I3-209ENST00000428574 SLC35A5Q9BS91 424 aa8.56□□□□□ -1.04
NR1I3-209ENST00000428574 TRIM4Q9C037 500 aa8.56□□□□□ -1.04
NR1I3-209ENST00000428574 ZMYND15Q9H091 742 aa8.56□□□□□ -1.04
NR1I3-209ENST00000428574 ARRDC1-AS1Q9H2J1 176 aa8.56□□□□□ -1.04
NR1I3-209ENST00000428574 VCX3BQ9H321 246 aa8.56□□□□□ -1.04
NR1I3-209ENST00000428574 MAGIXQ9H6Y5 334 aa8.56□□□□□ -1.04
NR1I3-209ENST00000428574 YY1AP1Q9H869 796 aa8.56□□□□□ -1.04
NR1I3-209ENST00000428574 C3orf14Q9HBI5 128 aa8.56□□□□□ -1.04
NR1I3-209ENST00000428574 C11orf16Q9NQ32 467 aa8.56□□□□□ -1.04
NR1I3-209ENST00000428574 SLC6A13Q9NSD5 602 aa8.56□□□□□ -1.04
NR1I3-209ENST00000428574 GMEB2Q9UKD1 530 aa8.56□□□□□ -1.04
NR1I3-209ENST00000428574 FBXW2Q9UKT8 454 aa8.56□□□□□ -1.04
NR1I3-209ENST00000428574 RNF103-CHMP3A0A140T963 221 aa8.55□□□□□ -1.04
NR1I3-209ENST00000428574 A0A1W2PQM1 296 aa8.55□□□□□ -1.04
NR1I3-209ENST00000428574 DHRS12A0PJE2 317 aa8.55□□□□□ -1.04
NR1I3-209ENST00000428574 LNP1A1A4G5 178 aa8.55□□□□□ -1.04
NR1I3-209ENST00000428574 CPED1A4D0V7 1026 aa8.55□□□□□ -1.04
NR1I3-209ENST00000428574 TTC36A6NLP5 189 aa8.55□□□□□ -1.04
NR1I3-209ENST00000428574 D6RAR5 112 aa8.55□□□□□ -1.04
NR1I3-209ENST00000428574 TMX2-CTNND1H3BSU7 103 aa8.55□□□□□ -1.04
NR1I3-209ENST00000428574 CLDN4O14493 209 aa8.55□□□□□ -1.04
NR1I3-209ENST00000428574 CASQ2O14958 399 aaPredicted RBP8.55□□□□□ -1.04
NR1I3-209ENST00000428574 DSCR3O14972 297 aa8.55□□□□□ -1.04
NR1I3-209ENST00000428574 ZNF749O43361 778 aa8.55□□□□□ -1.04
NR1I3-209ENST00000428574 HNRNPRO43390 633 aaKnown RBP8.55□□□□□ -1.04
NR1I3-209ENST00000428574 FOXS1O43638 330 aa8.55□□□□□ -1.04
NR1I3-209ENST00000428574 TNFRSF21O75509 655 aa8.55□□□□□ -1.04
NR1I3-209ENST00000428574 OR2B3O76000 313 aa8.55□□□□□ -1.04
NR1I3-209ENST00000428574 KCNK5O95279 499 aa8.55□□□□□ -1.04
NR1I3-209ENST00000428574 CPSF4O95639 269 aaKnown RBP8.55□□□□□ -1.04
NR1I3-209ENST00000428574 GPR75O95800 540 aa8.55□□□□□ -1.04
NR1I3-209ENST00000428574 ONECUT2O95948 504 aa8.55□□□□□ -1.04
NR1I3-209ENST00000428574 EIF2S1P05198 315 aaKnown RBP8.55□□□□□ -1.04
NR1I3-209ENST00000428574 RPLP0P05388 317 aaKnown RBP8.55□□□□□ -1.04
NR1I3-209ENST00000428574 CDK4P11802 303 aa8.55□□□□□ -1.04
NR1I3-209ENST00000428574 PORP16435 677 aaPredicted RBP8.55□□□□□ -1.04
NR1I3-209ENST00000428574 TCN1P20061 433 aaPredicted RBP8.55□□□□□ -1.04
NR1I3-209ENST00000428574 CHI3L1P36222 383 aaPredicted RBP8.55□□□□□ -1.04
NR1I3-209ENST00000428574 PPM1FP49593 454 aaPredicted RBP8.55□□□□□ -1.04
NR1I3-209ENST00000428574 OR4D2P58180 307 aa8.55□□□□□ -1.04
NR1I3-209ENST00000428574 RUNX2Q13950 521 aa8.55□□□□□ -1.04
NR1I3-209ENST00000428574 DSG2Q14126 1118 aa8.55□□□□□ -1.04
NR1I3-209ENST00000428574 SELPLGQ14242 412 aa8.55□□□□□ -1.04
NR1I3-209ENST00000428574 GNA13Q14344 377 aa8.55□□□□□ -1.04
NR1I3-209ENST00000428574 IL11RAQ14626 422 aa8.55□□□□□ -1.04
NR1I3-209ENST00000428574 AMZ1Q400G9 498 aa8.55□□□□□ -1.04
NR1I3-209ENST00000428574 GTDC1Q4AE62 458 aa8.55□□□□□ -1.04
NR1I3-209ENST00000428574 PERM1Q5SV97 790 aa8.55□□□□□ -1.04
NR1I3-209ENST00000428574 NKAIN2Q5VXU1 208 aa8.55□□□□□ -1.04
NR1I3-209ENST00000428574 GLYATQ6IB77 296 aa8.55□□□□□ -1.04
NR1I3-209ENST00000428574 DNAJC14Q6Y2X3 702 aaPredicted RBP8.55□□□□□ -1.04
NR1I3-209ENST00000428574 CCDC80Q76M96 950 aa8.55□□□□□ -1.04
NR1I3-209ENST00000428574 SLITRK4Q8IW52 837 aa8.55□□□□□ -1.04
NR1I3-209ENST00000428574 DTWD1Q8N5C7 304 aa8.55□□□□□ -1.04
NR1I3-209ENST00000428574 RNF148Q8N7C7 305 aa8.55□□□□□ -1.04
NR1I3-209ENST00000428574 AMER3Q8N944 861 aa8.55□□□□□ -1.04
NR1I3-209ENST00000428574 Q8N9G6 341 aaPredicted RBP8.55□□□□□ -1.04
NR1I3-209ENST00000428574 SUMF1Q8NBK3 374 aa8.55□□□□□ -1.04
NR1I3-209ENST00000428574 SUN3Q8TAQ9 357 aa8.55□□□□□ -1.04
NR1I3-209ENST00000428574 NUDT8Q8WV74 236 aa8.55□□□□□ -1.04
NR1I3-209ENST00000428574 PMM1Q92871 262 aa8.55□□□□□ -1.04
NR1I3-209ENST00000428574 CIDECQ96AQ7 238 aaPredicted RBP8.55□□□□□ -1.04
NR1I3-209ENST00000428574 EXOSC8Q96B26 276 aaKnown RBP8.55□□□□□ -1.04
NR1I3-209ENST00000428574 ZNF501Q96CX3 271 aaPredicted RBP8.55□□□□□ -1.04
NR1I3-209ENST00000428574 CNRIP1Q96F85 164 aaPredicted RBP8.55□□□□□ -1.04
NR1I3-209ENST00000428574 GFM1Q96RP9 751 aaKnown RBP8.55□□□□□ -1.04
NR1I3-209ENST00000428574 CDC6Q99741 560 aa8.55□□□□□ -1.04
NR1I3-209ENST00000428574 MACROD1Q9BQ69 325 aa8.55□□□□□ -1.04
NR1I3-209ENST00000428574 NUDT22Q9BRQ3 303 aa8.55□□□□□ -1.04
NR1I3-209ENST00000428574 NDC1Q9BTX1 674 aa8.55□□□□□ -1.04
NR1I3-209ENST00000428574 GTPBP2Q9BX10 602 aaKnown RBP8.55□□□□□ -1.04
NR1I3-209ENST00000428574 UGT2B28Q9BY64 529 aa8.55□□□□□ -1.04
NR1I3-209ENST00000428574 KLHL25Q9H0H3 589 aa8.55□□□□□ -1.04
NR1I3-209ENST00000428574 GLIPR2Q9H4G4 154 aa8.55□□□□□ -1.04
NR1I3-209ENST00000428574 IKZF5Q9H5V7 419 aa8.55□□□□□ -1.04
NR1I3-209ENST00000428574 CXorf36Q9H7Y0 433 aa8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms