RNA–Protein interactions for RNA: ENST00000427926.5

CLTCL1-202, Transcript of clathrin heavy chain like 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLTCL1, Length 5,513 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-202ENST00000427926 JAG1P78504 1218 aa9.53□□□□□ -0.88
CLTCL1-202ENST00000427926 SERTAD2Q14140 314 aa9.53□□□□□ -0.88
CLTCL1-202ENST00000427926 RBM39Q14498 530 aaKnown RBP9.53□□□□□ -0.88
CLTCL1-202ENST00000427926 KIR2DS5Q14953 304 aa9.53□□□□□ -0.88
CLTCL1-202ENST00000427926 ZNF709Q8N972 641 aa9.53□□□□□ -0.88
CLTCL1-202ENST00000427926 RCBTB1Q8NDN9 531 aa9.53□□□□□ -0.88
CLTCL1-202ENST00000427926 TLCD1Q96CP7 247 aa9.53□□□□□ -0.88
CLTCL1-202ENST00000427926 PAAF1Q9BRP4 392 aa9.53□□□□□ -0.88
CLTCL1-202ENST00000427926 NMUR2Q9GZQ4 415 aa9.53□□□□□ -0.88
CLTCL1-202ENST00000427926 SNTG1Q9NSN8 517 aa9.53□□□□□ -0.88
CLTCL1-202ENST00000427926 COQ3Q9NZJ6 369 aa9.53□□□□□ -0.88
CLTCL1-202ENST00000427926 H3BML4 177 aa9.53□□□□□ -0.88
CLTCL1-202ENST00000427926 ARL6IP5O75915 188 aa9.53□□□□□ -0.88
CLTCL1-202ENST00000427926 AK1P00568 194 aa9.53□□□□□ -0.88
CLTCL1-202ENST00000427926 DDCP20711 480 aa9.53□□□□□ -0.88
CLTCL1-202ENST00000427926 MAOBP27338 520 aa9.53□□□□□ -0.88
CLTCL1-202ENST00000427926 PRDX6P30041 224 aa9.53□□□□□ -0.88
CLTCL1-202ENST00000427926 EEFSECP57772 596 aaKnown RBP9.53□□□□□ -0.88
CLTCL1-202ENST00000427926 SLC3A1Q07837 685 aa9.53□□□□□ -0.88
CLTCL1-202ENST00000427926 DCAF12L1Q5VU92 463 aa9.53□□□□□ -0.88
CLTCL1-202ENST00000427926 UEVLDQ8IX04 471 aa9.53□□□□□ -0.88
CLTCL1-202ENST00000427926 ZNF610Q8N9Z0 462 aa9.53□□□□□ -0.88
CLTCL1-202ENST00000427926 MYLIPQ8WY64 445 aa9.53□□□□□ -0.88
CLTCL1-202ENST00000427926 RAB8BQ92930 207 aa9.53□□□□□ -0.88
CLTCL1-202ENST00000427926 PITX2Q99697 317 aa9.53□□□□□ -0.88
CLTCL1-202ENST00000427926 TPT1P8Q9HAU6 139 aa9.53□□□□□ -0.88
CLTCL1-202ENST00000427926 PAK6Q9NQU5 681 aaPredicted RBP9.53□□□□□ -0.88
CLTCL1-202ENST00000427926 ABCD2Q9UBJ2 740 aa9.53□□□□□ -0.88
CLTCL1-202ENST00000427926 DNAJB11Q9UBS4 358 aa9.53□□□□□ -0.88
CLTCL1-202ENST00000427926 ATXN7L1Q9ULK2 861 aaPredicted RBP9.53□□□□□ -0.88
CLTCL1-202ENST00000427926 A0A1B0GTW7 788 aa9.53□□□□□ -0.88
CLTCL1-202ENST00000427926 OR14I1A6ND48 311 aa9.53□□□□□ -0.88
CLTCL1-202ENST00000427926 RFXAPO00287 272 aa9.53□□□□□ -0.88
CLTCL1-202ENST00000427926 NPRL3Q12980 569 aa9.53□□□□□ -0.88
CLTCL1-202ENST00000427926 TGFBIQ15582 683 aa9.53□□□□□ -0.88
CLTCL1-202ENST00000427926 TNFAIP8L3Q5GJ75 292 aa9.53□□□□□ -0.88
CLTCL1-202ENST00000427926 CLLU1OSQ5K130 101 aa9.53□□□□□ -0.88
CLTCL1-202ENST00000427926 TMEM53Q6P2H8 277 aa9.53□□□□□ -0.88
CLTCL1-202ENST00000427926 ZADH2Q8N4Q0 377 aa9.53□□□□□ -0.88
CLTCL1-202ENST00000427926 ACVR1CQ8NER5 493 aa9.53□□□□□ -0.88
CLTCL1-202ENST00000427926 FER1L6-AS2Q96M78 137 aa9.53□□□□□ -0.88
CLTCL1-202ENST00000427926 CCDC115Q96NT0 180 aa9.53□□□□□ -0.88
CLTCL1-202ENST00000427926 RAB9BQ9NP90 201 aa9.53□□□□□ -0.88
CLTCL1-202ENST00000427926 PRSS51A0A1B0GVH4 220 aa9.53□□□□□ -0.88
CLTCL1-202ENST00000427926 NOBOXO60393 691 aa9.53□□□□□ -0.88
CLTCL1-202ENST00000427926 PRAMEF2O60811 474 aa9.53□□□□□ -0.88
CLTCL1-202ENST00000427926 SOX4Q06945 474 aaPredicted RBP9.53□□□□□ -0.88
CLTCL1-202ENST00000427926 PTPRCAPQ14761 206 aa9.53□□□□□ -0.88
CLTCL1-202ENST00000427926 SLC35G1Q2M3R5 365 aa9.53□□□□□ -0.88
CLTCL1-202ENST00000427926 ANKRD26P1Q6NSI1 321 aa9.53□□□□□ -0.88
CLTCL1-202ENST00000427926 UNC5DQ6UXZ4 953 aa9.53□□□□□ -0.88
CLTCL1-202ENST00000427926 ZNF782Q6ZMW2 699 aaPredicted RBP9.53□□□□□ -0.88
CLTCL1-202ENST00000427926 PPP1R35Q8TAP8 253 aa9.53□□□□□ -0.88
CLTCL1-202ENST00000427926 ELP5Q8TE02 316 aa9.53□□□□□ -0.88
CLTCL1-202ENST00000427926 OR5P2Q8WZ92 322 aa9.53□□□□□ -0.88
CLTCL1-202ENST00000427926 NXPE3Q969Y0 559 aa9.53□□□□□ -0.88
CLTCL1-202ENST00000427926 ARRDC3Q96B67 414 aa9.53□□□□□ -0.88
CLTCL1-202ENST00000427926 MSANTD3Q96H12 275 aa9.53□□□□□ -0.88
CLTCL1-202ENST00000427926 AIFM2Q9BRQ8 373 aa9.53□□□□□ -0.88
CLTCL1-202ENST00000427926 C1orf21Q9H246 121 aa9.53□□□□□ -0.88
CLTCL1-202ENST00000427926 C12orf65Q9H3J6 166 aaKnown RBP9.53□□□□□ -0.88
CLTCL1-202ENST00000427926 ZIM2Q9NZV7 527 aa9.53□□□□□ -0.88
CLTCL1-202ENST00000427926 C2orf92A0A1B0GVN3 265 aa9.52□□□□□ -0.88
CLTCL1-202ENST00000427926 K7ERQ8 282 aa9.52□□□□□ -0.88
CLTCL1-202ENST00000427926 AIREO43918 545 aa9.52□□□□□ -0.88
CLTCL1-202ENST00000427926 CD40LGP29965 261 aa9.52□□□□□ -0.88
CLTCL1-202ENST00000427926 GNRHRP30968 328 aa9.52□□□□□ -0.88
CLTCL1-202ENST00000427926 SFTPDP35247 375 aa9.52□□□□□ -0.88
CLTCL1-202ENST00000427926 EIF2S3P41091 472 aaKnown RBP9.52□□□□□ -0.88
CLTCL1-202ENST00000427926 POU3F4P49335 361 aa9.52□□□□□ -0.88
CLTCL1-202ENST00000427926 EIF5AP63241 154 aaKnown RBP9.52□□□□□ -0.88
CLTCL1-202ENST00000427926 MZT1Q08AG7 82 aa9.52□□□□□ -0.88
CLTCL1-202ENST00000427926 REEP3Q6NUK4 255 aa9.52□□□□□ -0.88
CLTCL1-202ENST00000427926 TMEM214Q6NUQ4 689 aaKnown RBP9.52□□□□□ -0.88
CLTCL1-202ENST00000427926 SLC2A7Q6PXP3 512 aa9.52□□□□□ -0.88
CLTCL1-202ENST00000427926 TMEM107Q6UX40 140 aa9.52□□□□□ -0.88
CLTCL1-202ENST00000427926 SHISA6Q6ZSJ9 500 aa9.52□□□□□ -0.88
CLTCL1-202ENST00000427926 SPERTQ8NA61 448 aa9.52□□□□□ -0.88
CLTCL1-202ENST00000427926 C15orf40Q8WUR7 153 aa9.52□□□□□ -0.88
CLTCL1-202ENST00000427926 UCN3Q969E3 161 aa9.52□□□□□ -0.88
CLTCL1-202ENST00000427926 ALPK1Q96QP1 1244 aa9.52□□□□□ -0.88
CLTCL1-202ENST00000427926 PHF12Q96QT6 1004 aa9.52□□□□□ -0.88
CLTCL1-202ENST00000427926 IL4I1Q96RQ9 567 aa9.52□□□□□ -0.88
CLTCL1-202ENST00000427926 MROQ9BYG7 248 aa9.52□□□□□ -0.88
CLTCL1-202ENST00000427926 HOXD1Q9GZZ0 328 aa9.52□□□□□ -0.88
CLTCL1-202ENST00000427926 SACM1LQ9NTJ5 587 aa9.52□□□□□ -0.88
CLTCL1-202ENST00000427926 GPRC5BQ9NZH0 403 aa9.52□□□□□ -0.88
CLTCL1-202ENST00000427926 BOKQ9UMX3 212 aaPredicted RBP9.52□□□□□ -0.88
CLTCL1-202ENST00000427926 ICKQ9UPZ9 632 aa9.52□□□□□ -0.88
CLTCL1-202ENST00000427926 A0A0J9YY10 115 aa9.52□□□□□ -0.89
CLTCL1-202ENST00000427926 ANKRD34BA5PLL1 514 aa9.52□□□□□ -0.89
CLTCL1-202ENST00000427926 IL3P08700 152 aa9.52□□□□□ -0.89
CLTCL1-202ENST00000427926 IDH3AP50213 366 aa9.52□□□□□ -0.89
CLTCL1-202ENST00000427926 AFF3P51826 1226 aaKnown RBP9.52□□□□□ -0.89
CLTCL1-202ENST00000427926 NFE2L1Q14494 772 aa9.52□□□□□ -0.89
CLTCL1-202ENST00000427926 GRIN2CQ14957 1233 aa9.52□□□□□ -0.89
CLTCL1-202ENST00000427926 LCTLQ6UWM7 567 aa9.52□□□□□ -0.89
CLTCL1-202ENST00000427926 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP9.52□□□□□ -0.891e-6■■■■■ 92.8
CLTCL1-202ENST00000427926 CBR4Q8N4T8 237 aa9.52□□□□□ -0.89
CLTCL1-202ENST00000427926 SLC7A6OSQ96CW6 309 aaPredicted RBP9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms