RNA–Protein interactions for RNA: ENST00000427191.6

PTPN13-203, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN13, Length 8,487 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-203ENST00000427191 EEDO75530 441 aaKnown RBP13.89□□□□□ -0.19
PTPN13-203ENST00000427191 HLA-DQB2P05538 268 aa13.89□□□□□ -0.19
PTPN13-203ENST00000427191 CHRM5P08912 532 aaPredicted RBP13.89□□□□□ -0.19
PTPN13-203ENST00000427191 ENTPD1P49961 510 aa13.89□□□□□ -0.19
PTPN13-203ENST00000427191 UGT3A2Q3SY77 523 aa13.89□□□□□ -0.19
PTPN13-203ENST00000427191 NRROSQ86YC3 692 aa13.89□□□□□ -0.19
PTPN13-203ENST00000427191 OR5P2Q8WZ92 322 aa13.89□□□□□ -0.19
PTPN13-203ENST00000427191 GLYATL1Q969I3 302 aa13.89□□□□□ -0.19
PTPN13-203ENST00000427191 SECISBP2Q96T21 854 aaKnown RBP13.89□□□□□ -0.19
PTPN13-203ENST00000427191 SSX3Q99909 188 aa13.89□□□□□ -0.19
PTPN13-203ENST00000427191 EBF4Q9BQW3 602 aa13.89□□□□□ -0.19
PTPN13-203ENST00000427191 STRADBQ9C0K7 418 aa13.89□□□□□ -0.19
PTPN13-203ENST00000427191 LILRB5O75023 590 aa13.89□□□□□ -0.19
PTPN13-203ENST00000427191 ZBTB48P10074 688 aaPredicted RBP13.89□□□□□ -0.19
PTPN13-203ENST00000427191 CD34P28906 385 aa13.89□□□□□ -0.19
PTPN13-203ENST00000427191 CASP6P55212 293 aa13.89□□□□□ -0.19
PTPN13-203ENST00000427191 FOXK1P85037 733 aa13.89□□□□□ -0.19
PTPN13-203ENST00000427191 KLF1Q13351 362 aaPredicted RBP13.89□□□□□ -0.19
PTPN13-203ENST00000427191 SNTB2Q13425 540 aaKnown RBP13.89□□□□□ -0.19
PTPN13-203ENST00000427191 FAM214AQ32MH5 1076 aa13.89□□□□□ -0.19
PTPN13-203ENST00000427191 SLC22A14Q9Y267 594 aa13.89□□□□□ -0.19
PTPN13-203ENST00000427191 ITM2AO43736 263 aa13.89□□□□□ -0.19
PTPN13-203ENST00000427191 ALDH3B1P43353 468 aa13.89□□□□□ -0.19
PTPN13-203ENST00000427191 STC1P52823 247 aa13.89□□□□□ -0.19
PTPN13-203ENST00000427191 PMS2P3Q13401 168 aa13.89□□□□□ -0.19
PTPN13-203ENST00000427191 CAMK2DQ13557 499 aa13.89□□□□□ -0.19
PTPN13-203ENST00000427191 SLC18B1Q6NT16 456 aa13.89□□□□□ -0.19
PTPN13-203ENST00000427191 HACD2Q6Y1H2 254 aa13.89□□□□□ -0.19
PTPN13-203ENST00000427191 TCEANCQ8N8B7 351 aa13.89□□□□□ -0.19
PTPN13-203ENST00000427191 RHEBL1Q8TAI7 183 aa13.89□□□□□ -0.19
PTPN13-203ENST00000427191 CNOT9Q92600 299 aaKnown RBP13.89□□□□□ -0.19
PTPN13-203ENST00000427191 EVA1AQ9H8M9 152 aa13.89□□□□□ -0.19
PTPN13-203ENST00000427191 DNAJC27Q9NZQ0 273 aa13.89□□□□□ -0.19
PTPN13-203ENST00000427191 PARP4Q9UKK3 1724 aaKnown RBP13.89□□□□□ -0.19
PTPN13-203ENST00000427191 HTRA2O43464 458 aaPredicted RBP13.88□□□□□ -0.19
PTPN13-203ENST00000427191 DLDP09622 509 aaKnown RBP13.88□□□□□ -0.19
PTPN13-203ENST00000427191 GPR149Q86SP6 731 aa13.88□□□□□ -0.19
PTPN13-203ENST00000427191 RELL1Q8IUW5 271 aa13.88□□□□□ -0.19
PTPN13-203ENST00000427191 SCML4Q8N228 414 aa13.88□□□□□ -0.19
PTPN13-203ENST00000427191 LRRN4Q8WUT4 740 aa13.88□□□□□ -0.19
PTPN13-203ENST00000427191 APMAPQ9HDC9 416 aa13.88□□□□□ -0.19
PTPN13-203ENST00000427191 ANKRD66B4E2M5 251 aa13.88□□□□□ -0.19
PTPN13-203ENST00000427191 OR8U9P0C7N5 309 aa13.88□□□□□ -0.19
PTPN13-203ENST00000427191 CERS1P27544 350 aa13.88□□□□□ -0.19
PTPN13-203ENST00000427191 MAGEA11P43364 429 aa13.88□□□□□ -0.19
PTPN13-203ENST00000427191 NTRK2Q16620 822 aa13.88□□□□□ -0.19
PTPN13-203ENST00000427191 BCL2L15Q5TBC7 163 aa13.88□□□□□ -0.19
PTPN13-203ENST00000427191 PNCKQ6P2M8 343 aa13.88□□□□□ -0.19
PTPN13-203ENST00000427191 RBM23Q86U06 439 aaKnown RBP13.88□□□□□ -0.19
PTPN13-203ENST00000427191 TMEM139Q8IV31 216 aa13.88□□□□□ -0.19
PTPN13-203ENST00000427191 SKA3Q8IX90 412 aa13.88□□□□□ -0.19
PTPN13-203ENST00000427191 OR5H2Q8NGV7 314 aa13.88□□□□□ -0.19
PTPN13-203ENST00000427191 OR5AK3PQ8NH89 298 aa13.88□□□□□ -0.19
PTPN13-203ENST00000427191 C7orf34Q96L11 122 aa13.88□□□□□ -0.19
PTPN13-203ENST00000427191 CNTNAP3BQ96NU0 1288 aa13.88□□□□□ -0.19
PTPN13-203ENST00000427191 TTYH3Q9C0H2 523 aa13.88□□□□□ -0.19
PTPN13-203ENST00000427191 HOXD1Q9GZZ0 328 aa13.88□□□□□ -0.19
PTPN13-203ENST00000427191 HEBP1Q9NRV9 189 aa13.88□□□□□ -0.19
PTPN13-203ENST00000427191 A0A1B0GVT2 93 aa13.88□□□□□ -0.19
PTPN13-203ENST00000427191 CSF1P09603 554 aa13.88□□□□□ -0.19
PTPN13-203ENST00000427191 SLC35B2Q8TB61 432 aa13.88□□□□□ -0.19
PTPN13-203ENST00000427191 PABPC4LP0CB38 370 aaKnown RBP13.88□□□□□ -0.19
PTPN13-203ENST00000427191 CSKP41240 450 aa13.88□□□□□ -0.19
PTPN13-203ENST00000427191 OR2AP1Q8NGE2 309 aa13.88□□□□□ -0.19
PTPN13-203ENST00000427191 SOX1O00570 391 aaPredicted RBP13.88□□□□□ -0.19
PTPN13-203ENST00000427191 ARHGEF15O94989 841 aa13.88□□□□□ -0.19
PTPN13-203ENST00000427191 SPATA31D3P0C874 917 aa13.88□□□□□ -0.19
PTPN13-203ENST00000427191 ADRB3P13945 408 aa13.88□□□□□ -0.19
PTPN13-203ENST00000427191 RAB4AP20338 218 aa13.88□□□□□ -0.19
PTPN13-203ENST00000427191 HTR1EP28566 365 aa13.88□□□□□ -0.19
PTPN13-203ENST00000427191 KRBOX4Q5JUW0 171 aa13.88□□□□□ -0.19
PTPN13-203ENST00000427191 DPY19L3Q6ZPD9 716 aa13.88□□□□□ -0.19
PTPN13-203ENST00000427191 SPATA31D4Q6ZUB0 917 aa13.88□□□□□ -0.19
PTPN13-203ENST00000427191 CEACAM19Q7Z692 300 aa13.88□□□□□ -0.19
PTPN13-203ENST00000427191 LILRB2Q8N423 598 aa13.88□□□□□ -0.19
PTPN13-203ENST00000427191 CMASQ8NFW8 434 aaPredicted RBP13.88□□□□□ -0.19
PTPN13-203ENST00000427191 FAM198AQ9UFP1 575 aa13.88□□□□□ -0.19
PTPN13-203ENST00000427191 TEX264Q9Y6I9 313 aa13.88□□□□□ -0.19
PTPN13-203ENST00000427191 PCDH17O14917 1159 aa13.88□□□□□ -0.19
PTPN13-203ENST00000427191 ANKRD28O15084 1053 aa13.88□□□□□ -0.19
PTPN13-203ENST00000427191 SF3B4Q15427 424 aaKnown RBP eCLIP13.88□□□□□ -0.19
PTPN13-203ENST00000427191 SLC39A4Q6P5W5 647 aa13.88□□□□□ -0.19
PTPN13-203ENST00000427191 STK35Q8TDR2 534 aa13.88□□□□□ -0.19
PTPN13-203ENST00000427191 ABHD5Q8WTS1 349 aa13.88□□□□□ -0.19
PTPN13-203ENST00000427191 TMEM175Q9BSA9 504 aa13.88□□□□□ -0.19
PTPN13-203ENST00000427191 SCML2Q9UQR0 700 aa13.88□□□□□ -0.19
PTPN13-203ENST00000427191 C2orf72A6NCS6 295 aa13.88□□□□□ -0.19
PTPN13-203ENST00000427191 OR5K4A6NMS3 321 aa13.88□□□□□ -0.19
PTPN13-203ENST00000427191 ACTL6BO94805 426 aa13.88□□□□□ -0.19
PTPN13-203ENST00000427191 TCEA1P23193 301 aaKnown RBP13.88□□□□□ -0.19
PTPN13-203ENST00000427191 LEPRP48357 1165 aaKnown RBP13.88□□□□□ -0.19
PTPN13-203ENST00000427191 NKX3-2P78367 333 aa13.88□□□□□ -0.19
PTPN13-203ENST00000427191 MFSD13AQ14CX5 517 aa13.88□□□□□ -0.19
PTPN13-203ENST00000427191 HMGN3Q15651 99 aa13.88□□□□□ -0.19
PTPN13-203ENST00000427191 TMEM225Q6GV28 225 aa13.88□□□□□ -0.19
PTPN13-203ENST00000427191 LRIG1Q96JA1 1093 aa13.88□□□□□ -0.19
PTPN13-203ENST00000427191 DEFB118Q96PH6 123 aa13.88□□□□□ -0.19
PTPN13-203ENST00000427191 SRA1Q9HD15 236 aaKnown RBP13.88□□□□□ -0.19
PTPN13-203ENST00000427191 SLIT2O94813 1529 aa13.87□□□□□ -0.19
PTPN13-203ENST00000427191 NIPSNAP2O75323 286 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms