RNA–Protein interactions for RNA: ENST00000426246.2

USP42-203, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 2

Gene USP42, Length 3,611 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-203ENST00000426246 FAM25GB3EWG6 89 aa12.74□□□□□ -0.37
USP42-203ENST00000426246 GMFGO60234 142 aa12.74□□□□□ -0.37
USP42-203ENST00000426246 CEBPBP17676 345 aa12.74□□□□□ -0.37
USP42-203ENST00000426246 NRIP1P48552 1158 aa12.74□□□□□ -0.37
USP42-203ENST00000426246 DSTNP60981 165 aa12.74□□□□□ -0.37
USP42-203ENST00000426246 KCNJ10P78508 379 aa12.74□□□□□ -0.37
USP42-203ENST00000426246 ERICH5Q6P6B1 374 aa12.74□□□□□ -0.37
USP42-203ENST00000426246 TMPRSS11AQ6ZMR5 421 aa12.74□□□□□ -0.37
USP42-203ENST00000426246 CCDC116Q8IYX3 515 aa12.74□□□□□ -0.37
USP42-203ENST00000426246 HDHD5Q9BXW7 423 aa12.74□□□□□ -0.37
USP42-203ENST00000426246 FAM120CQ9NX05 1096 aaKnown RBP12.74□□□□□ -0.37
USP42-203ENST00000426246 WBP11Q9Y2W2 641 aaKnown RBP12.74□□□□□ -0.37
USP42-203ENST00000426246 CABIN1Q9Y6J0 2220 aa12.74□□□□□ -0.37
USP42-203ENST00000426246 M0R082 166 aa12.74□□□□□ -0.37
USP42-203ENST00000426246 TLR4O00206 839 aa12.74□□□□□ -0.37
USP42-203ENST00000426246 SLC16A6O15403 523 aa12.74□□□□□ -0.37
USP42-203ENST00000426246 PLOD3O60568 738 aa12.74□□□□□ -0.37
USP42-203ENST00000426246 CYP2A6P11509 494 aaPredicted RBP12.74□□□□□ -0.37
USP42-203ENST00000426246 ACP5P13686 325 aa12.74□□□□□ -0.37
USP42-203ENST00000426246 RYKP34925 604 aa12.74□□□□□ -0.37
USP42-203ENST00000426246 GSTM5P46439 218 aa12.74□□□□□ -0.37
USP42-203ENST00000426246 RGS6P49758 472 aa12.74□□□□□ -0.37
USP42-203ENST00000426246 ZNF763Q0D2J5 394 aa12.74□□□□□ -0.37
USP42-203ENST00000426246 HNRNPA0Q13151 305 aaKnown RBP12.74□□□□□ -0.37
USP42-203ENST00000426246 TJAP1Q5JTD0 557 aa12.74□□□□□ -0.37
USP42-203ENST00000426246 ASB18Q6ZVZ8 466 aa12.74□□□□□ -0.37
USP42-203ENST00000426246 IQCHQ86VS3 1027 aa12.74□□□□□ -0.37
USP42-203ENST00000426246 OR4N5Q8IXE1 308 aa12.74□□□□□ -0.37
USP42-203ENST00000426246 GLYATL1Q969I3 302 aa12.74□□□□□ -0.37
USP42-203ENST00000426246 ZNF300Q96RE9 604 aaPredicted RBP12.74□□□□□ -0.37
USP42-203ENST00000426246 FNDC11Q9BVV2 318 aa12.74□□□□□ -0.37
USP42-203ENST00000426246 SLIRPQ9GZT3 109 aaKnown RBP12.74□□□□□ -0.37
USP42-203ENST00000426246 DUSP21Q9H596 190 aa12.74□□□□□ -0.37
USP42-203ENST00000426246 CCDC177Q9NQR7 707 aaPredicted RBP12.74□□□□□ -0.37
USP42-203ENST00000426246 CNIH4Q9P003 139 aa12.74□□□□□ -0.37
USP42-203ENST00000426246 ANGPT4Q9Y264 503 aa12.74□□□□□ -0.37
USP42-203ENST00000426246 FAM186AA6NE01 2351 aa12.74□□□□□ -0.37
USP42-203ENST00000426246 ANHXE9PGG2 379 aa12.74□□□□□ -0.37
USP42-203ENST00000426246 JUNBP17275 347 aaPredicted RBP12.74□□□□□ -0.37
USP42-203ENST00000426246 HNMTP50135 292 aa12.74□□□□□ -0.37
USP42-203ENST00000426246 CLCNKAP51800 687 aa12.74□□□□□ -0.37
USP42-203ENST00000426246 SRP54P61011 504 aaKnown RBP12.74□□□□□ -0.37
USP42-203ENST00000426246 SELENBP1Q13228 472 aa12.74□□□□□ -0.37
USP42-203ENST00000426246 ATAT1Q5SQI0 421 aa12.74□□□□□ -0.37
USP42-203ENST00000426246 ANXA8L1Q5VT79 327 aa12.74□□□□□ -0.37
USP42-203ENST00000426246 LYSMD2Q8IV50 215 aa12.74□□□□□ -0.37
USP42-203ENST00000426246 PCNPQ8WW12 178 aaKnown RBP12.74□□□□□ -0.37
USP42-203ENST00000426246 APH1BQ8WW43 257 aa12.74□□□□□ -0.37
USP42-203ENST00000426246 PHF21AQ96BD5 680 aa12.74□□□□□ -0.37
USP42-203ENST00000426246 TMEM19Q96HH6 336 aa12.74□□□□□ -0.37
USP42-203ENST00000426246 MROQ9BYG7 248 aa12.74□□□□□ -0.37
USP42-203ENST00000426246 REEP4Q9H6H4 257 aa12.74□□□□□ -0.37
USP42-203ENST00000426246 AKIP1Q9NQ31 210 aa12.74□□□□□ -0.37
USP42-203ENST00000426246 UGT2A1Q9Y4X1 527 aa12.74□□□□□ -0.37
USP42-203ENST00000426246 TNFRSF21O75509 655 aa12.73□□□□□ -0.37
USP42-203ENST00000426246 PSMA1P25786 263 aaKnown RBP12.73□□□□□ -0.37
USP42-203ENST00000426246 MAPK8P45983 427 aa12.73□□□□□ -0.37
USP42-203ENST00000426246 XKP51811 444 aa12.73□□□□□ -0.37
USP42-203ENST00000426246 INSL4Q14641 139 aa12.73□□□□□ -0.37
USP42-203ENST00000426246 CDKN3Q16667 212 aa12.73□□□□□ -0.37
USP42-203ENST00000426246 CRB2Q5IJ48 1285 aa12.73□□□□□ -0.37
USP42-203ENST00000426246 USP43Q70EL4 1123 aa12.73□□□□□ -0.37
USP42-203ENST00000426246 KIAA0907Q7Z7F0 614 aaPredicted RBP12.73□□□□□ -0.37
USP42-203ENST00000426246 BBS10Q8TAM1 723 aa12.73□□□□□ -0.37
USP42-203ENST00000426246 RSPRY1Q96DX4 576 aa12.73□□□□□ -0.37
USP42-203ENST00000426246 RDH12Q96NR8 316 aa12.73□□□□□ -0.37
USP42-203ENST00000426246 NEK6Q9HC98 313 aa12.73□□□□□ -0.37
USP42-203ENST00000426246 ZNF232Q9UNY5 417 aa12.73□□□□□ -0.37
USP42-203ENST00000426246 PCDHGB6Q9Y5F9 930 aa12.73□□□□□ -0.37
USP42-203ENST00000426246 MUC22E2RYF6 1773 aaPredicted RBP12.73□□□□□ -0.37
USP42-203ENST00000426246 EPOPA6NHQ4 379 aa12.73□□□□□ -0.37
USP42-203ENST00000426246 ARHGAP33O14559 1287 aa12.73□□□□□ -0.37
USP42-203ENST00000426246 CASKO14936 926 aa12.73□□□□□ -0.37
USP42-203ENST00000426246 NDUFB5O43674 189 aa12.73□□□□□ -0.37
USP42-203ENST00000426246 UPK1BO75841 260 aa12.73□□□□□ -0.37
USP42-203ENST00000426246 PAK4O96013 591 aaPredicted RBP12.73□□□□□ -0.37
USP42-203ENST00000426246 PEPDP12955 493 aa12.73□□□□□ -0.37
USP42-203ENST00000426246 CD9P21926 228 aa12.73□□□□□ -0.37
USP42-203ENST00000426246 CHMP24386 653 aa12.73□□□□□ -0.37
USP42-203ENST00000426246 C9orf64Q5T6V5 341 aa12.73□□□□□ -0.37
USP42-203ENST00000426246 NXNL2Q5VZ03 156 aa12.73□□□□□ -0.37
USP42-203ENST00000426246 TMEM215Q68D42 235 aa12.73□□□□□ -0.37
USP42-203ENST00000426246 PAMR1Q6UXH9 720 aa12.73□□□□□ -0.37
USP42-203ENST00000426246 ABI3BPQ7Z7G0 1075 aa12.73□□□□□ -0.37
USP42-203ENST00000426246 SERPINA11Q86U17 422 aa12.73□□□□□ -0.37
USP42-203ENST00000426246 PHF6Q8IWS0 365 aaKnown RBP eCLIP12.73□□□□□ -0.37
USP42-203ENST00000426246 DNAJC22Q8N4W6 341 aa12.73□□□□□ -0.37
USP42-203ENST00000426246 PJA1Q8NG27 643 aa12.73□□□□□ -0.37
USP42-203ENST00000426246 C16orf78Q8WTQ4 265 aa12.73□□□□□ -0.37
USP42-203ENST00000426246 SMAP2Q8WU79 429 aaPredicted RBP12.73□□□□□ -0.37
USP42-203ENST00000426246 RACGAP1Q9H0H5 632 aa12.73□□□□□ -0.37
USP42-203ENST00000426246 MTIF3Q9H2K0 278 aaKnown RBP12.73□□□□□ -0.37
USP42-203ENST00000426246 TRPV5Q9NQA5 729 aa12.73□□□□□ -0.37
USP42-203ENST00000426246 TAS2R9Q9NYW1 312 aa12.73□□□□□ -0.37
USP42-203ENST00000426246 NDRG4Q9ULP0 352 aaKnown RBP12.73□□□□□ -0.37
USP42-203ENST00000426246 HS3ST2Q9Y278 367 aa12.73□□□□□ -0.37
USP42-203ENST00000426246 OR2A25A4D2G3 310 aa12.73□□□□□ -0.37
USP42-203ENST00000426246 AGAP5A6NIR3 686 aa12.73□□□□□ -0.37
USP42-203ENST00000426246 FAM183AA6NL82 134 aa12.73□□□□□ -0.37
USP42-203ENST00000426246 EPHX1P07099 455 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms