RNA–Protein interactions for RNA: ENST00000425072.5

MDC1-205, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 3

Gene MDC1, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-205ENST00000425072 CDRT15Q96T59 188 aa9.75□□□□□ -0.85
MDC1-205ENST00000425072 DPH2Q9BQC3 489 aaPredicted RBP9.75□□□□□ -0.85
MDC1-205ENST00000425072 YIPF2Q9BWQ6 316 aa9.75□□□□□ -0.85
MDC1-205ENST00000425072 OCIAD1Q9NX40 245 aa9.75□□□□□ -0.85
MDC1-205ENST00000425072 TEX10Q9NXF1 929 aaPredicted RBP9.75□□□□□ -0.85
MDC1-205ENST00000425072 SIDT1Q9NXL6 827 aaKnown RBP9.75□□□□□ -0.85
MDC1-205ENST00000425072 TAS2R9Q9NYW1 312 aa9.75□□□□□ -0.85
MDC1-205ENST00000425072 ZNF282Q9UDV7 671 aaPredicted RBP9.75□□□□□ -0.85
MDC1-205ENST00000425072 CES1P1Q9UKY3 287 aa9.75□□□□□ -0.85
MDC1-205ENST00000425072 VPS4AQ9UN37 437 aa9.75□□□□□ -0.85
MDC1-205ENST00000425072 ENTPD4Q9Y227 616 aa9.75□□□□□ -0.85
MDC1-205ENST00000425072 MRPS2Q9Y399 296 aaKnown RBP9.75□□□□□ -0.85
MDC1-205ENST00000425072 L3MBTL1Q9Y468 752 aa9.75□□□□□ -0.85
MDC1-205ENST00000425072 MAP4K5Q9Y4K4 846 aa9.75□□□□□ -0.85
MDC1-205ENST00000425072 USP24Q9UPU5 2620 aa9.75□□□□□ -0.85
MDC1-205ENST00000425072 CEP250Q9BV73 2442 aa9.75□□□□□ -0.85
MDC1-205ENST00000425072 SCN2AQ99250 2005 aa9.75□□□□□ -0.85
MDC1-205ENST00000425072 ZNF292O60281 2723 aa9.74□□□□□ -0.85
MDC1-205ENST00000425072 FRYLO94915 3013 aa9.74□□□□□ -0.85
MDC1-205ENST00000425072 CCDC187A0A096LP49 1063 aa9.74□□□□□ -0.85
MDC1-205ENST00000425072 MYO1GB0I1T2 1018 aa9.74□□□□□ -0.85
MDC1-205ENST00000425072 C4orf51C9J302 202 aa9.74□□□□□ -0.85
MDC1-205ENST00000425072 C9JVG2 144 aa9.74□□□□□ -0.85
MDC1-205ENST00000425072 CASC3O15234 703 aaKnown RBP9.74□□□□□ -0.85
MDC1-205ENST00000425072 NVLO15381 856 aaKnown RBP9.74□□□□□ -0.85
MDC1-205ENST00000425072 PDPK1O15530 556 aa9.74□□□□□ -0.85
MDC1-205ENST00000425072 SCN2BO60939 215 aa9.74□□□□□ -0.85
MDC1-205ENST00000425072 CSO75390 466 aaKnown RBP9.74□□□□□ -0.85
MDC1-205ENST00000425072 RDH16O75452 317 aa9.74□□□□□ -0.85
MDC1-205ENST00000425072 ERAL1O75616 437 aaKnown RBP9.74□□□□□ -0.85
MDC1-205ENST00000425072 SLITRK5O94991 958 aa9.74□□□□□ -0.85
MDC1-205ENST00000425072 AIFM1O95831 613 aa9.74□□□□□ -0.85
MDC1-205ENST00000425072 ONECUT2O95948 504 aa9.74□□□□□ -0.85
MDC1-205ENST00000425072 CTSBP07858 339 aa9.74□□□□□ -0.85
MDC1-205ENST00000425072 JMJD7P0C870 316 aa9.74□□□□□ -0.85
MDC1-205ENST00000425072 CD1EP15812 388 aa9.74□□□□□ -0.85
MDC1-205ENST00000425072 PORP16435 677 aaPredicted RBP9.74□□□□□ -0.85
MDC1-205ENST00000425072 FRKP42685 505 aaPredicted RBP9.74□□□□□ -0.85
MDC1-205ENST00000425072 GCGRP47871 477 aa9.74□□□□□ -0.85
MDC1-205ENST00000425072 WNT3P56703 355 aa9.74□□□□□ -0.85
MDC1-205ENST00000425072 HSD17B7P56937 341 aa9.74□□□□□ -0.85
MDC1-205ENST00000425072 PCBP4P57723 403 aaKnown RBP9.74□□□□□ -0.85
MDC1-205ENST00000425072 DCDP81605 110 aaKnown RBP9.74□□□□□ -0.85
MDC1-205ENST00000425072 OCA2Q04671 838 aa9.74□□□□□ -0.85
MDC1-205ENST00000425072 LRIF1Q5T3J3 769 aa9.74□□□□□ -0.85
MDC1-205ENST00000425072 BHLHB9Q6PI77 547 aa9.74□□□□□ -0.85
MDC1-205ENST00000425072 DLEU7Q6UYE1 221 aa9.74□□□□□ -0.85
MDC1-205ENST00000425072 RIPOR1Q6ZS17 1223 aa9.74□□□□□ -0.85
MDC1-205ENST00000425072 PRSS41Q7RTY9 318 aa9.74□□□□□ -0.85
MDC1-205ENST00000425072 DGLUCYQ7Z3D6 616 aa9.74□□□□□ -0.85
MDC1-205ENST00000425072 B3GNT8Q7Z7M8 397 aa9.74□□□□□ -0.85
MDC1-205ENST00000425072 DHDDSQ86SQ9 333 aa9.74□□□□□ -0.85
MDC1-205ENST00000425072 SLCO6A1Q86UG4 719 aa9.74□□□□□ -0.85
MDC1-205ENST00000425072 RETREG3Q86VR2 466 aa9.74□□□□□ -0.85
MDC1-205ENST00000425072 TMPRSS12Q86WS5 348 aa9.74□□□□□ -0.85
MDC1-205ENST00000425072 BMPERQ8N8U9 685 aa9.74□□□□□ -0.85
MDC1-205ENST00000425072 WDR36Q8NI36 951 aaKnown RBP9.74□□□□□ -0.85
MDC1-205ENST00000425072 DNAJB14Q8TBM8 379 aa9.74□□□□□ -0.85
MDC1-205ENST00000425072 EXOSC8Q96B26 276 aaKnown RBP9.74□□□□□ -0.85
MDC1-205ENST00000425072 RBM18Q96H35 190 aaKnown RBP9.74□□□□□ -0.85
MDC1-205ENST00000425072 CGREF1Q99674 301 aa9.74□□□□□ -0.85
MDC1-205ENST00000425072 THTPAQ9BU02 230 aa9.74□□□□□ -0.85
MDC1-205ENST00000425072 THUMPD3Q9BV44 507 aaKnown RBP9.74□□□□□ -0.85
MDC1-205ENST00000425072 B3GNT4Q9C0J1 378 aa9.74□□□□□ -0.85
MDC1-205ENST00000425072 RAD21L1Q9H4I0 556 aa9.74□□□□□ -0.85
MDC1-205ENST00000425072 IL1RL2Q9HB29 575 aa9.74□□□□□ -0.85
MDC1-205ENST00000425072 MKKSQ9NPJ1 570 aaPredicted RBP9.74□□□□□ -0.85
MDC1-205ENST00000425072 BCAP29Q9UHQ4 241 aa9.74□□□□□ -0.85
MDC1-205ENST00000425072 CORO2BQ9UQ03 480 aa9.74□□□□□ -0.85
MDC1-205ENST00000425072 UNC79Q9P2D8 2635 aa9.73□□□□□ -0.85
MDC1-205ENST00000425072 ZNF860A6NHJ4 632 aa9.73□□□□□ -0.85
MDC1-205ENST00000425072 TM4SF5O14894 197 aa9.73□□□□□ -0.85
MDC1-205ENST00000425072 DNAJA2O60884 412 aa9.73□□□□□ -0.85
MDC1-205ENST00000425072 DKK1O94907 266 aa9.73□□□□□ -0.85
MDC1-205ENST00000425072 SOX30O94993 753 aa9.73□□□□□ -0.85
MDC1-205ENST00000425072 KRT75O95678 551 aa9.73□□□□□ -0.85
MDC1-205ENST00000425072 ALBP02768 609 aa9.73□□□□□ -0.85
MDC1-205ENST00000425072 CCNYL3P0C7X3 344 aa9.73□□□□□ -0.85
MDC1-205ENST00000425072 ITGAXP20702 1163 aa9.73□□□□□ -0.85
MDC1-205ENST00000425072 FBLP22087 321 aaKnown RBP9.73□□□□□ -0.85
MDC1-205ENST00000425072 UQCRC2P22695 453 aa9.73□□□□□ -0.85
MDC1-205ENST00000425072 GPC1P35052 558 aa9.73□□□□□ -0.85
MDC1-205ENST00000425072 MAGEA8P43361 318 aa9.73□□□□□ -0.85
MDC1-205ENST00000425072 OR1D4P47884 311 aa9.73□□□□□ -0.85
MDC1-205ENST00000425072 OLR1P78380 273 aa9.73□□□□□ -0.85
MDC1-205ENST00000425072 PLIN5Q00G26 463 aa9.73□□□□□ -0.85
MDC1-205ENST00000425072 STX4Q12846 297 aa9.73□□□□□ -0.85
MDC1-205ENST00000425072 SERTAD2Q14140 314 aa9.73□□□□□ -0.85
MDC1-205ENST00000425072 CEBPEQ15744 281 aa9.73□□□□□ -0.85
MDC1-205ENST00000425072 RUNDC3AQ59EK9 446 aa9.73□□□□□ -0.85
MDC1-205ENST00000425072 SAMD4BQ5PRF9 694 aaKnown RBP9.73□□□□□ -0.85
MDC1-205ENST00000425072 C6orf163Q5TEZ5 329 aa9.73□□□□□ -0.85
MDC1-205ENST00000425072 ANKRD26P1Q6NSI1 321 aa9.73□□□□□ -0.85
MDC1-205ENST00000425072 NANOGP8Q6NSW7 305 aa9.73□□□□□ -0.85
MDC1-205ENST00000425072 PWWP2BQ6NUJ5 590 aa9.73□□□□□ -0.85
MDC1-205ENST00000425072 DHRS13Q6UX07 377 aa9.73□□□□□ -0.85
MDC1-205ENST00000425072 SCUBE1Q8IWY4 988 aa9.73□□□□□ -0.85
MDC1-205ENST00000425072 KIAA2013Q8IYS2 634 aa9.73□□□□□ -0.85
MDC1-205ENST00000425072 CCDC116Q8IYX3 515 aa9.73□□□□□ -0.85
MDC1-205ENST00000425072 TNIP2Q8NFZ5 429 aa9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms