RNA–Protein interactions for RNA: ENST00000423567.1

USP49-204, Transcript of ubiquitin specific peptidase 49, humanhuman

TSL 2

Gene USP49, Length 752 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-204ENST00000423567 PRAMEF2O60811 474 aa10.21□□□□□ -0.77
USP49-204ENST00000423567 ZFAND5O76080 213 aa10.21□□□□□ -0.77
USP49-204ENST00000423567 ESRRBO95718 433 aa10.21□□□□□ -0.77
USP49-204ENST00000423567 GBAP04062 536 aa10.21□□□□□ -0.77
USP49-204ENST00000423567 KLK1P06870 262 aa10.21□□□□□ -0.77
USP49-204ENST00000423567 CD46P15529 392 aa10.21□□□□□ -0.77
USP49-204ENST00000423567 CYB561P49447 251 aa10.21□□□□□ -0.77
USP49-204ENST00000423567 MAPK12P53778 367 aa10.21□□□□□ -0.77
USP49-204ENST00000423567 DNAJB13P59910 316 aa10.21□□□□□ -0.77
USP49-204ENST00000423567 ID2Q02363 134 aa10.21□□□□□ -0.77
USP49-204ENST00000423567 CSTF3Q12996 717 aaKnown RBP10.21□□□□□ -0.77
USP49-204ENST00000423567 TUBA3CQ13748 450 aa10.21□□□□□ -0.77
USP49-204ENST00000423567 OR1C1Q15619 314 aa10.21□□□□□ -0.77
USP49-204ENST00000423567 OR52E8Q6IFG1 317 aa10.21□□□□□ -0.77
USP49-204ENST00000423567 TUBA3EQ6PEY2 450 aa10.21□□□□□ -0.77
USP49-204ENST00000423567 OR4N5Q8IXE1 308 aa10.21□□□□□ -0.77
USP49-204ENST00000423567 SRRM1Q8IYB3 904 aaKnown RBP10.21□□□□□ -0.77
USP49-204ENST00000423567 METTL4Q8N3J2 472 aa10.21□□□□□ -0.77
USP49-204ENST00000423567 AMER2Q8N7J2 671 aa10.21□□□□□ -0.77
USP49-204ENST00000423567 BCORP1Q8N888 145 aa10.21□□□□□ -0.77
USP49-204ENST00000423567 GBP7Q8N8V2 638 aaPredicted RBP10.21□□□□□ -0.77
USP49-204ENST00000423567 APCDD1LQ8NCL9 501 aa10.21□□□□□ -0.77
USP49-204ENST00000423567 SREK1Q8WXA9 508 aaKnown RBP10.21□□□□□ -0.77
USP49-204ENST00000423567 ANKRD9Q96BM1 317 aaPredicted RBP10.21□□□□□ -0.77
USP49-204ENST00000423567 C19orf60Q96EN9 201 aa10.21□□□□□ -0.77
USP49-204ENST00000423567 ART5Q96L15 291 aa10.21□□□□□ -0.77
USP49-204ENST00000423567 SMC6Q96SB8 1091 aa10.21□□□□□ -0.77
USP49-204ENST00000423567 ZNF717Q9BY31 904 aaPredicted RBP10.21□□□□□ -0.77
USP49-204ENST00000423567 MRPL1Q9BYD6 325 aaKnown RBP10.21□□□□□ -0.77
USP49-204ENST00000423567 OR8D2Q9GZM6 311 aa10.21□□□□□ -0.77
USP49-204ENST00000423567 MID1IP1Q9NPA3 183 aa10.21□□□□□ -0.77
USP49-204ENST00000423567 FARSBQ9NSD9 589 aaKnown RBP10.21□□□□□ -0.77
USP49-204ENST00000423567 OXSMQ9NWU1 459 aa10.21□□□□□ -0.77
USP49-204ENST00000423567 VPS29Q9UBQ0 182 aa10.21□□□□□ -0.77
USP49-204ENST00000423567 LGALS13Q9UHV8 139 aa10.21□□□□□ -0.77
USP49-204ENST00000423567 PPIEQ9UNP9 301 aaKnown RBP10.21□□□□□ -0.77
USP49-204ENST00000423567 CLDN16Q9Y5I7 305 aa10.21□□□□□ -0.77
USP49-204ENST00000423567 A0A1B0GTL3 188 aa10.2□□□□□ -0.78
USP49-204ENST00000423567 MYOCOSA0A1B0GUC4 107 aa10.2□□□□□ -0.78
USP49-204ENST00000423567 A0A1W2PR48 441 aa10.2□□□□□ -0.78
USP49-204ENST00000423567 FGF17O60258 216 aa10.2□□□□□ -0.78
USP49-204ENST00000423567 RASAL1O95294 804 aa10.2□□□□□ -0.78
USP49-204ENST00000423567 GPR75O95800 540 aa10.2□□□□□ -0.78
USP49-204ENST00000423567 AIFM1O95831 613 aa10.2□□□□□ -0.78
USP49-204ENST00000423567 CRYABP02511 175 aaKnown RBP10.2□□□□□ -0.78
USP49-204ENST00000423567 ALOX15P16050 662 aaPredicted RBP10.2□□□□□ -0.78
USP49-204ENST00000423567 GNLYP22749 145 aa10.2□□□□□ -0.78
USP49-204ENST00000423567 PIK3R1P27986 724 aa10.2□□□□□ -0.78
USP49-204ENST00000423567 CD96P40200 585 aa10.2□□□□□ -0.78
USP49-204ENST00000423567 STT3AP46977 705 aa10.2□□□□□ -0.78
USP49-204ENST00000423567 NAGLUP54802 743 aa10.2□□□□□ -0.78
USP49-204ENST00000423567 MLF1P58340 268 aa10.2□□□□□ -0.78
USP49-204ENST00000423567 IGLV3-21P80748 117 aaPredicted RBP10.2□□□□□ -0.78
USP49-204ENST00000423567 FOLH1Q04609 750 aa10.2□□□□□ -0.78
USP49-204ENST00000423567 NR6A1Q15406 480 aa10.2□□□□□ -0.78
USP49-204ENST00000423567 KRT71Q3SY84 523 aa10.2□□□□□ -0.78
USP49-204ENST00000423567 ZNF766Q5HY98 468 aa10.2□□□□□ -0.78
USP49-204ENST00000423567 C6orf163Q5TEZ5 329 aa10.2□□□□□ -0.78
USP49-204ENST00000423567 LIPMQ5VYY2 423 aa10.2□□□□□ -0.78
USP49-204ENST00000423567 C18orf63Q68DL7 685 aa10.2□□□□□ -0.78
USP49-204ENST00000423567 MRM1Q6IN84 353 aaKnown RBP10.2□□□□□ -0.78
USP49-204ENST00000423567 HSDL2Q6YN16 418 aa10.2□□□□□ -0.78
USP49-204ENST00000423567 COMMD6Q7Z4G1 85 aa10.2□□□□□ -0.78
USP49-204ENST00000423567 TRABD2AQ86V40 505 aa10.2□□□□□ -0.78
USP49-204ENST00000423567 ST13P4Q8IZP2 240 aaPredicted RBP10.2□□□□□ -0.78
USP49-204ENST00000423567 TMEM156Q8N614 296 aa10.2□□□□□ -0.78
USP49-204ENST00000423567 TMEM178AQ8NBL3 297 aa10.2□□□□□ -0.78
USP49-204ENST00000423567 FAM98AQ8NCA5 519 aaKnown RBP10.2□□□□□ -0.78
USP49-204ENST00000423567 GRHL3Q8TE85 626 aa10.2□□□□□ -0.78
USP49-204ENST00000423567 AGAP11Q8TF27 550 aa10.2□□□□□ -0.78
USP49-204ENST00000423567 THAP3Q8WTV1 239 aaPredicted RBP10.2□□□□□ -0.78
USP49-204ENST00000423567 PTPMT1Q8WUK0 201 aaPredicted RBP10.2□□□□□ -0.78
USP49-204ENST00000423567 TMEM125Q96AQ2 219 aa10.2□□□□□ -0.78
USP49-204ENST00000423567 HBEGFQ99075 208 aa10.2□□□□□ -0.78
USP49-204ENST00000423567 NPAS2Q99743 824 aa10.2□□□□□ -0.78
USP49-204ENST00000423567 FAIM2Q9BWQ8 316 aa10.2□□□□□ -0.78
USP49-204ENST00000423567 GSTO2Q9H4Y5 243 aa10.2□□□□□ -0.78
USP49-204ENST00000423567 OLAHQ9NV23 265 aa10.2□□□□□ -0.78
USP49-204ENST00000423567 SDAD1Q9NVU7 687 aaKnown RBP eCLIP10.2□□□□□ -0.78
USP49-204ENST00000423567 MKS1Q9NXB0 559 aa10.2□□□□□ -0.78
USP49-204ENST00000423567 ANKRD10Q9NXR5 420 aa10.2□□□□□ -0.78
USP49-204ENST00000423567 SENP1Q9P0U3 644 aa10.2□□□□□ -0.78
USP49-204ENST00000423567 LRFN1Q9P244 771 aa10.2□□□□□ -0.78
USP49-204ENST00000423567 ZNF225Q9UK10 706 aa10.2□□□□□ -0.78
USP49-204ENST00000423567 RAB21Q9UL25 225 aa10.2□□□□□ -0.78
USP49-204ENST00000423567 PLLPQ9Y342 182 aa10.2□□□□□ -0.78
USP49-204ENST00000423567 ASB4Q9Y574 426 aa10.2□□□□□ -0.78
USP49-204ENST00000423567 HELZ2Q9BYK8 2649 aaKnown RBP10.2□□□□□ -0.78
USP49-204ENST00000423567 GLOD5A6NK44 160 aa10.19□□□□□ -0.78
USP49-204ENST00000423567 TCP11X1B4DZS4 312 aa10.19□□□□□ -0.78
USP49-204ENST00000423567 RGS16O15492 202 aaPredicted RBP10.19□□□□□ -0.78
USP49-204ENST00000423567 MAN1A2O60476 641 aa10.19□□□□□ -0.78
USP49-204ENST00000423567 TRIM13O60858 407 aa10.19□□□□□ -0.78
USP49-204ENST00000423567 ERLIN1O75477 346 aa10.19□□□□□ -0.78
USP49-204ENST00000423567 PRKRAO75569 313 aaKnown RBP10.19□□□□□ -0.78
USP49-204ENST00000423567 TPP2P29144 1249 aaPredicted RBP10.19□□□□□ -0.78
USP49-204ENST00000423567 DEKP35659 375 aaKnown RBP10.19□□□□□ -0.78
USP49-204ENST00000423567 SSR4P51571 173 aa10.19□□□□□ -0.78
USP49-204ENST00000423567 GPR143P51810 404 aa10.19□□□□□ -0.78
USP49-204ENST00000423567 TRA2BP62995 288 aaKnown RBP10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms