RNA–Protein interactions for RNA: ENST00000422991.1

COL7A1-202, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 5

Gene COL7A1, Length 597 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-202ENST00000422991 FGF17O60258 216 aa15.95■□□□□ 0.14
COL7A1-202ENST00000422991 LDB3O75112 727 aa15.95■□□□□ 0.14
COL7A1-202ENST00000422991 C8orf89P0DMQ9 161 aa15.95■□□□□ 0.14
COL7A1-202ENST00000422991 G6PDP11413 515 aa15.95■□□□□ 0.14
COL7A1-202ENST00000422991 PPP2R1BP30154 601 aa15.95■□□□□ 0.14
COL7A1-202ENST00000422991 OTX2P32243 289 aa15.95■□□□□ 0.14
COL7A1-202ENST00000422991 ALDH9A1P49189 494 aa15.95■□□□□ 0.14
COL7A1-202ENST00000422991 SEC24CP53992 1094 aa15.95■□□□□ 0.14
COL7A1-202ENST00000422991 IGLV3-21P80748 117 aaPredicted RBP15.95■□□□□ 0.14
COL7A1-202ENST00000422991 MC1RQ01726 317 aa15.95■□□□□ 0.14
COL7A1-202ENST00000422991 C2orf80Q0P641 193 aa15.95■□□□□ 0.14
COL7A1-202ENST00000422991 PTGR1Q14914 329 aa15.95■□□□□ 0.14
COL7A1-202ENST00000422991 HEPACAMQ14CZ8 416 aa15.95■□□□□ 0.14
COL7A1-202ENST00000422991 COL28A1Q2UY09 1125 aa15.95■□□□□ 0.14
COL7A1-202ENST00000422991 CRTC2Q53ET0 693 aaPredicted RBP15.95■□□□□ 0.14
COL7A1-202ENST00000422991 BROXQ5VW32 411 aa15.95■□□□□ 0.14
COL7A1-202ENST00000422991 FAAH2Q6GMR7 532 aa15.95■□□□□ 0.14
COL7A1-202ENST00000422991 SLC48A1Q6P1K1 146 aa15.95■□□□□ 0.14
COL7A1-202ENST00000422991 LANCL3Q6ZV70 420 aa15.95■□□□□ 0.14
COL7A1-202ENST00000422991 MRGPREQ86SM8 312 aa15.95■□□□□ 0.14
COL7A1-202ENST00000422991 RAB43Q86YS6 212 aa15.95■□□□□ 0.14
COL7A1-202ENST00000422991 DNAJB14Q8TBM8 379 aa15.95■□□□□ 0.14
COL7A1-202ENST00000422991 ANKRD9Q96BM1 317 aaPredicted RBP15.95■□□□□ 0.14
COL7A1-202ENST00000422991 MESP1Q9BRJ9 268 aa15.95■□□□□ 0.14
COL7A1-202ENST00000422991 AIG1Q9NVV5 245 aa15.95■□□□□ 0.14
COL7A1-202ENST00000422991 EHD3Q9NZN3 535 aa15.95■□□□□ 0.14
COL7A1-202ENST00000422991 EXO1Q9UQ84 846 aaKnown RBP15.95■□□□□ 0.14
COL7A1-202ENST00000422991 PTPRQQ9UMZ3 2332 aa15.95■□□□□ 0.14
COL7A1-202ENST00000422991 ZFYVE26Q68DK2 2539 aa15.95■□□□□ 0.14
COL7A1-202ENST00000422991 LOC102723996A0A087X1L8 192 aa15.94■□□□□ 0.14
COL7A1-202ENST00000422991 A0A0G2JND7 137 aa15.94■□□□□ 0.14
COL7A1-202ENST00000422991 A0A1W2PQ72 361 aa15.94■□□□□ 0.14
COL7A1-202ENST00000422991 TCRBV16S1A1N1A0A5B0 115 aa15.94■□□□□ 0.14
COL7A1-202ENST00000422991 WASHC1A8K0Z3 465 aa15.94■□□□□ 0.14
COL7A1-202ENST00000422991 SOCS6O14544 535 aa15.94■□□□□ 0.14
COL7A1-202ENST00000422991 DDCP20711 480 aa15.94■□□□□ 0.14
COL7A1-202ENST00000422991 ITPKBP27987 946 aa15.94■□□□□ 0.14
COL7A1-202ENST00000422991 ID2Q02363 134 aa15.94■□□□□ 0.14
COL7A1-202ENST00000422991 FOLH1Q04609 750 aa15.94■□□□□ 0.14
COL7A1-202ENST00000422991 NSDHLQ15738 373 aa15.94■□□□□ 0.14
COL7A1-202ENST00000422991 TMEM198Q66K66 360 aa15.94■□□□□ 0.14
COL7A1-202ENST00000422991 ANKRD37Q7Z713 158 aa15.94■□□□□ 0.14
COL7A1-202ENST00000422991 METTL21AQ8WXB1 218 aa15.94■□□□□ 0.14
COL7A1-202ENST00000422991 NACC2Q96BF6 587 aa15.94■□□□□ 0.14
COL7A1-202ENST00000422991 C5AR2Q9P296 337 aa15.94■□□□□ 0.14
COL7A1-202ENST00000422991 CDC14CA4D256 554 aa15.93■□□□□ 0.14
COL7A1-202ENST00000422991 SYNDIG1LA6NDD5 238 aa15.93■□□□□ 0.14
COL7A1-202ENST00000422991 E9PBE3 544 aa15.93■□□□□ 0.14
COL7A1-202ENST00000422991 NKX2-8O15522 239 aa15.93■□□□□ 0.14
COL7A1-202ENST00000422991 AKAP10O43572 662 aa15.93■□□□□ 0.14
COL7A1-202ENST00000422991 KLHL41O60662 606 aa15.93■□□□□ 0.14
COL7A1-202ENST00000422991 LRATO95237 230 aa15.93■□□□□ 0.14
COL7A1-202ENST00000422991 GPR75O95800 540 aa15.93■□□□□ 0.14
COL7A1-202ENST00000422991 FURINP09958 794 aa15.93■□□□□ 0.14
COL7A1-202ENST00000422991 DRD4P21917 467 aa15.93■□□□□ 0.14
COL7A1-202ENST00000422991 HPCAL1P37235 193 aa15.93■□□□□ 0.14
COL7A1-202ENST00000422991 UCNP55089 124 aa15.93■□□□□ 0.14
COL7A1-202ENST00000422991 C21orf58P58505 322 aa15.93■□□□□ 0.14
COL7A1-202ENST00000422991 CDC20Q12834 499 aa15.93■□□□□ 0.14
COL7A1-202ENST00000422991 PDE7AQ13946 482 aa15.93■□□□□ 0.14
COL7A1-202ENST00000422991 ATP1A1-AS1Q5TC04 95 aa15.93■□□□□ 0.14
COL7A1-202ENST00000422991 KIRREL2Q6UWL6 708 aa15.93■□□□□ 0.14
COL7A1-202ENST00000422991 CCDC81Q6ZN84 652 aa15.93■□□□□ 0.14
COL7A1-202ENST00000422991 OR4N5Q8IXE1 308 aa15.93■□□□□ 0.14
COL7A1-202ENST00000422991 GFM2Q969S9 779 aaKnown RBP15.93■□□□□ 0.14
COL7A1-202ENST00000422991 C8orf44Q96CB5 159 aa15.93■□□□□ 0.14
COL7A1-202ENST00000422991 KLHL29Q96CT2 875 aa15.93■□□□□ 0.14
COL7A1-202ENST00000422991 ZNF764Q96H86 408 aaPredicted RBP15.93■□□□□ 0.14
COL7A1-202ENST00000422991 MARK4Q96L34 752 aa15.93■□□□□ 0.14
COL7A1-202ENST00000422991 TMEM120AQ9BXJ8 343 aa15.93■□□□□ 0.14
COL7A1-202ENST00000422991 BRINP2Q9C0B6 783 aa15.93■□□□□ 0.14
COL7A1-202ENST00000422991 NSRP1Q9H0G5 558 aaKnown RBP15.93■□□□□ 0.14
COL7A1-202ENST00000422991 REEP4Q9H6H4 257 aa15.93■□□□□ 0.14
COL7A1-202ENST00000422991 MIEF1Q9NQG6 463 aa15.93■□□□□ 0.14
COL7A1-202ENST00000422991 KLHL14Q9P2G3 628 aa15.93■□□□□ 0.14
COL7A1-202ENST00000422991 C19orf25Q9UFG5 118 aaPredicted RBP15.93■□□□□ 0.14
COL7A1-202ENST00000422991 GPR45Q9Y5Y3 372 aa15.93■□□□□ 0.14
COL7A1-202ENST00000422991 CROCCQ5TZA2 2017 aa15.92■□□□□ 0.14
COL7A1-202ENST00000422991 GMNCA6NCL1 334 aa15.92■□□□□ 0.14
COL7A1-202ENST00000422991 ANKRD28O15084 1053 aa15.92■□□□□ 0.14
COL7A1-202ENST00000422991 SCAMP2O15127 329 aaKnown RBP15.92■□□□□ 0.14
COL7A1-202ENST00000422991 UBDO15205 165 aa15.92■□□□□ 0.14
COL7A1-202ENST00000422991 TBX19O60806 448 aa15.92■□□□□ 0.14
COL7A1-202ENST00000422991 PRKAR1AP10644 381 aa15.92■□□□□ 0.14
COL7A1-202ENST00000422991 IDO1P14902 403 aa15.92■□□□□ 0.14
COL7A1-202ENST00000422991 PIK3R1P27986 724 aa15.92■□□□□ 0.14
COL7A1-202ENST00000422991 CLDN8P56748 225 aa15.92■□□□□ 0.14
COL7A1-202ENST00000422991 TMPRSS3P57727 454 aa15.92■□□□□ 0.14
COL7A1-202ENST00000422991 EEF1A2Q05639 463 aaKnown RBP15.92■□□□□ 0.14
COL7A1-202ENST00000422991 ACTN3Q08043 901 aaPredicted RBP15.92■□□□□ 0.14
COL7A1-202ENST00000422991 STX4Q12846 297 aa15.92■□□□□ 0.14
COL7A1-202ENST00000422991 ATP1A4Q13733 1029 aa15.92■□□□□ 0.14
COL7A1-202ENST00000422991 SERTAD2Q14140 314 aa15.92■□□□□ 0.14
COL7A1-202ENST00000422991 CPEB2Q7Z5Q1 589 aaKnown RBP15.92■□□□□ 0.14
COL7A1-202ENST00000422991 TICAM1Q8IUC6 712 aa15.92■□□□□ 0.14
COL7A1-202ENST00000422991 RIMKLAQ8IXN7 391 aa15.92■□□□□ 0.14
COL7A1-202ENST00000422991 FAM9CQ8IZT9 166 aa15.92■□□□□ 0.14
COL7A1-202ENST00000422991 KRTCAP2Q8N6L1 136 aa15.92■□□□□ 0.14
COL7A1-202ENST00000422991 ZSCAN1Q8NBB4 408 aa15.92■□□□□ 0.14
COL7A1-202ENST00000422991 OR11G2Q8NGC1 345 aa15.92■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms