RNA–Protein interactions for RNA: ENST00000421887.2

SFXN1-202, Transcript of sideroflexin 1, humanhuman

TSL 4

Gene SFXN1, Length 551 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-202ENST00000421887 LGALS16A8MUM7 142 aa4.57□□□□□ -1.68
SFXN1-202ENST00000421887 EIF3CLB5ME19 914 aaKnown RBP4.57□□□□□ -1.68
SFXN1-202ENST00000421887 M0QYG6 137 aa4.57□□□□□ -1.68
SFXN1-202ENST00000421887 EIF3FO00303 357 aaPredicted RBP4.57□□□□□ -1.68
SFXN1-202ENST00000421887 CES2O00748 559 aa4.57□□□□□ -1.68
SFXN1-202ENST00000421887 CNOT3O75175 753 aaKnown RBP4.57□□□□□ -1.68
SFXN1-202ENST00000421887 RNF8O76064 485 aa4.57□□□□□ -1.68
SFXN1-202ENST00000421887 BMP10O95393 424 aa4.57□□□□□ -1.68
SFXN1-202ENST00000421887 SLC4A1P02730 911 aa4.57□□□□□ -1.68
SFXN1-202ENST00000421887 AHSGP02765 367 aa4.57□□□□□ -1.68
SFXN1-202ENST00000421887 SERPINA7P05543 415 aa4.57□□□□□ -1.68
SFXN1-202ENST00000421887 ICAM2P13598 275 aa4.57□□□□□ -1.68
SFXN1-202ENST00000421887 TNFRSF1BP20333 461 aa4.57□□□□□ -1.68
SFXN1-202ENST00000421887 FPR3P25089 353 aa4.57□□□□□ -1.68
SFXN1-202ENST00000421887 PBLDP30039 288 aaPredicted RBP4.57□□□□□ -1.68
SFXN1-202ENST00000421887 PPP1R2P41236 205 aa4.57□□□□□ -1.68
SFXN1-202ENST00000421887 PIK3CGP48736 1102 aa4.57□□□□□ -1.68
SFXN1-202ENST00000421887 ITGA8P53708 1063 aa4.57□□□□□ -1.68
SFXN1-202ENST00000421887 CDH6P55285 790 aa4.57□□□□□ -1.68
SFXN1-202ENST00000421887 STX17P56962 302 aa4.57□□□□□ -1.68
SFXN1-202ENST00000421887 DCAF7P61962 342 aa4.57□□□□□ -1.68
SFXN1-202ENST00000421887 RUNX1T1Q06455 604 aa4.57□□□□□ -1.68
SFXN1-202ENST00000421887 TFF3Q07654 80 aa4.57□□□□□ -1.68
SFXN1-202ENST00000421887 TMEM115Q12893 351 aaPredicted RBP4.57□□□□□ -1.68
SFXN1-202ENST00000421887 SLC13A2Q13183 592 aa4.57□□□□□ -1.68
SFXN1-202ENST00000421887 DEFB110Q30KQ9 67 aa4.57□□□□□ -1.68
SFXN1-202ENST00000421887 PPP6R3Q5H9R7 873 aaPredicted RBP4.57□□□□□ -1.68
SFXN1-202ENST00000421887 Q5PR19 223 aa4.57□□□□□ -1.68
SFXN1-202ENST00000421887 INTS11Q5TA45 600 aaKnown RBP4.57□□□□□ -1.68
SFXN1-202ENST00000421887 NAA35Q5VZE5 725 aa4.57□□□□□ -1.68
SFXN1-202ENST00000421887 ATL3Q6DD88 541 aa4.57□□□□□ -1.68
SFXN1-202ENST00000421887 TXNRD3NBQ6F5E7 133 aa4.57□□□□□ -1.68
SFXN1-202ENST00000421887 GBP6Q6ZN66 633 aa4.57□□□□□ -1.68
SFXN1-202ENST00000421887 RNF44Q7L0R7 432 aa4.57□□□□□ -1.68
SFXN1-202ENST00000421887 NDUFAF7Q7L592 441 aa4.57□□□□□ -1.68
SFXN1-202ENST00000421887 FAM90A1Q86YD7 464 aa4.57□□□□□ -1.68
SFXN1-202ENST00000421887 ZNF547Q8IVP9 402 aa4.57□□□□□ -1.68
SFXN1-202ENST00000421887 PGBD5Q8N414 524 aa4.57□□□□□ -1.68
SFXN1-202ENST00000421887 ATPAF2Q8N5M1 289 aa4.57□□□□□ -1.68
SFXN1-202ENST00000421887 TRAM1L1Q8N609 369 aa4.57□□□□□ -1.68
SFXN1-202ENST00000421887 HORMAD2Q8N7B1 307 aa4.57□□□□□ -1.68
SFXN1-202ENST00000421887 TMEM178AQ8NBL3 297 aa4.57□□□□□ -1.68
SFXN1-202ENST00000421887 ACVR1CQ8NER5 493 aa4.57□□□□□ -1.68
SFXN1-202ENST00000421887 LPCAT1Q8NF37 534 aa4.57□□□□□ -1.68
SFXN1-202ENST00000421887 OR10Q1Q8NGQ4 319 aa4.57□□□□□ -1.68
SFXN1-202ENST00000421887 CENPIQ92674 756 aaPredicted RBP4.57□□□□□ -1.68
SFXN1-202ENST00000421887 DHTKD1Q96HY7 919 aaPredicted RBP4.57□□□□□ -1.68
SFXN1-202ENST00000421887 NSMCE3Q96MG7 304 aa4.57□□□□□ -1.68
SFXN1-202ENST00000421887 FYTTD1Q96QD9 318 aaKnown RBP4.57□□□□□ -1.68
SFXN1-202ENST00000421887 EIF3CQ99613 913 aaKnown RBP4.57□□□□□ -1.68
SFXN1-202ENST00000421887 TUBGCP2Q9BSJ2 902 aa4.57□□□□□ -1.68
SFXN1-202ENST00000421887 THAP7Q9BT49 309 aaPredicted RBP4.57□□□□□ -1.68
SFXN1-202ENST00000421887 FAM167BQ9BTA0 163 aa4.57□□□□□ -1.68
SFXN1-202ENST00000421887 NUP85Q9BW27 656 aa4.57□□□□□ -1.68
SFXN1-202ENST00000421887 SORBS1Q9BX66 1292 aaKnown RBP4.57□□□□□ -1.68
SFXN1-202ENST00000421887 POLR1EQ9GZS1 481 aaKnown RBP4.57□□□□□ -1.68
SFXN1-202ENST00000421887 TP63Q9H3D4 680 aaPredicted RBP4.57□□□□□ -1.68
SFXN1-202ENST00000421887 DHX35Q9H5Z1 703 aaKnown RBP4.57□□□□□ -1.68
SFXN1-202ENST00000421887 KLHL1Q9NR64 748 aa4.57□□□□□ -1.68
SFXN1-202ENST00000421887 BEX4Q9NWD9 120 aaPredicted RBP4.57□□□□□ -1.68
SFXN1-202ENST00000421887 CHKBQ9Y259 395 aa4.57□□□□□ -1.68
SFXN1-202ENST00000421887 CRYL1Q9Y2S2 319 aa4.57□□□□□ -1.68
SFXN1-202ENST00000421887 HEBP2Q9Y5Z4 205 aa4.57□□□□□ -1.68
SFXN1-202ENST00000421887 NOTCH3Q9UM47 2321 aa4.57□□□□□ -1.68
SFXN1-202ENST00000421887 ATRQ13535 2644 aa4.57□□□□□ -1.68
SFXN1-202ENST00000421887 MPDZO75970 2070 aa4.57□□□□□ -1.68
SFXN1-202ENST00000421887 PRSS29PA6NIE9 313 aa4.56□□□□□ -1.68
SFXN1-202ENST00000421887 A6NNC1 897 aa4.56□□□□□ -1.68
SFXN1-202ENST00000421887 SYT5O00445 386 aa4.56□□□□□ -1.68
SFXN1-202ENST00000421887 BTN3A1O00481 513 aa4.56□□□□□ -1.68
SFXN1-202ENST00000421887 RASGRF2O14827 1237 aa4.56□□□□□ -1.68
SFXN1-202ENST00000421887 CDC40O60508 579 aaKnown RBP eCLIP4.56□□□□□ -1.68
SFXN1-202ENST00000421887 POP7O75817 140 aaKnown RBP4.56□□□□□ -1.68
SFXN1-202ENST00000421887 SMC2O95347 1197 aa4.56□□□□□ -1.68
SFXN1-202ENST00000421887 FGFR1OPO95684 399 aaKnown RBP4.56□□□□□ -1.68
SFXN1-202ENST00000421887 IGKV3-20P01619 116 aa4.56□□□□□ -1.68
SFXN1-202ENST00000421887 MT-ND5P03915 603 aa4.56□□□□□ -1.68
SFXN1-202ENST00000421887 PVRP15151 417 aa4.56□□□□□ -1.68
SFXN1-202ENST00000421887 ZNF24P17028 368 aa4.56□□□□□ -1.68
SFXN1-202ENST00000421887 ERCC2P18074 760 aa4.56□□□□□ -1.68
SFXN1-202ENST00000421887 UGT1A1P22309 533 aa4.56□□□□□ -1.68
SFXN1-202ENST00000421887 RPL26P61254 145 aaKnown RBP4.56□□□□□ -1.68
SFXN1-202ENST00000421887 HSF1Q00613 529 aa4.56□□□□□ -1.68
SFXN1-202ENST00000421887 GALNT1Q10472 559 aaPredicted RBP4.56□□□□□ -1.68
SFXN1-202ENST00000421887 PMPCAQ10713 525 aa4.56□□□□□ -1.68
SFXN1-202ENST00000421887 CUL4AQ13619 759 aa4.56□□□□□ -1.68
SFXN1-202ENST00000421887 RAB32Q13637 225 aa4.56□□□□□ -1.68
SFXN1-202ENST00000421887 NFE2L1Q14494 772 aa4.56□□□□□ -1.68
SFXN1-202ENST00000421887 EXOC3L4Q17RC7 722 aa4.56□□□□□ -1.68
SFXN1-202ENST00000421887 KLHL10Q6JEL2 608 aa4.56□□□□□ -1.68
SFXN1-202ENST00000421887 NEK10Q6ZWH5 1172 aa4.56□□□□□ -1.68
SFXN1-202ENST00000421887 NLRP9Q7RTR0 991 aa4.56□□□□□ -1.68
SFXN1-202ENST00000421887 NR2C2APQ86WQ0 139 aa4.56□□□□□ -1.68
SFXN1-202ENST00000421887 CCDC71Q8IV32 467 aaPredicted RBP4.56□□□□□ -1.68
SFXN1-202ENST00000421887 JOSD2Q8TAC2 188 aa4.56□□□□□ -1.68
SFXN1-202ENST00000421887 FAM57AQ8TBR7 257 aa4.56□□□□□ -1.68
SFXN1-202ENST00000421887 IPCEF1Q8WWN9 437 aaPredicted RBP4.56□□□□□ -1.68
SFXN1-202ENST00000421887 C8orf44Q96CB5 159 aa4.56□□□□□ -1.68
SFXN1-202ENST00000421887 ZNF653Q96CK0 615 aa4.56□□□□□ -1.68
SFXN1-202ENST00000421887 RBM41Q96IZ5 413 aaKnown RBP4.56□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms