RNA–Protein interactions for RNA: ENST00000419974.2

SHMT1P1-201, Transcript of serine hydroxymethyltransferase 1 (soluble) pseudogene 1, humanhuman

BASIC

Gene SHMT1P1, Length 1,312 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT1P1-201ENST00000419974 TMEM125Q96AQ2 219 aa13.44□□□□□ -0.26
SHMT1P1-201ENST00000419974 MIEF2Q96C03 454 aa13.44□□□□□ -0.26
SHMT1P1-201ENST00000419974 LIN37Q96GY3 246 aaPredicted RBP13.44□□□□□ -0.26
SHMT1P1-201ENST00000419974 GBP5Q96PP8 586 aa13.44□□□□□ -0.26
SHMT1P1-201ENST00000419974 PANX1Q96RD7 426 aa13.44□□□□□ -0.26
SHMT1P1-201ENST00000419974 CDRT15Q96T59 188 aa13.44□□□□□ -0.26
SHMT1P1-201ENST00000419974 ZPBPQ9BS86 351 aa13.44□□□□□ -0.26
SHMT1P1-201ENST00000419974 THTPAQ9BU02 230 aa13.44□□□□□ -0.26
SHMT1P1-201ENST00000419974 SPATA9Q9BWV2 254 aa13.44□□□□□ -0.26
SHMT1P1-201ENST00000419974 B3GNT4Q9C0J1 378 aa13.44□□□□□ -0.26
SHMT1P1-201ENST00000419974 TGIF2Q9GZN2 237 aa13.44□□□□□ -0.26
SHMT1P1-201ENST00000419974 STARD5Q9NSY2 213 aa13.44□□□□□ -0.26
SHMT1P1-201ENST00000419974 SLC25A37Q9NYZ2 338 aa13.44□□□□□ -0.26
SHMT1P1-201ENST00000419974 VAPAQ9P0L0 249 aa13.44□□□□□ -0.26
SHMT1P1-201ENST00000419974 NTMQ9P121 344 aa13.44□□□□□ -0.26
SHMT1P1-201ENST00000419974 RARRES3Q9UL19 164 aa13.44□□□□□ -0.26
SHMT1P1-201ENST00000419974 PCDHGB4Q9UN71 923 aa13.44□□□□□ -0.26
SHMT1P1-201ENST00000419974 CORO2BQ9UQ03 480 aa13.44□□□□□ -0.26
SHMT1P1-201ENST00000419974 MRPS33Q9Y291 106 aaKnown RBP13.44□□□□□ -0.26
SHMT1P1-201ENST00000419974 MAP4K5Q9Y4K4 846 aa13.44□□□□□ -0.26
SHMT1P1-201ENST00000419974 RP1P56715 2156 aa13.44□□□□□ -0.26
SHMT1P1-201ENST00000419974 IGLV3-12A0A075B6K2 115 aa13.43□□□□□ -0.26
SHMT1P1-201ENST00000419974 A8MU76 341 aa13.43□□□□□ -0.26
SHMT1P1-201ENST00000419974 PGRMC2O15173 223 aa13.43□□□□□ -0.26
SHMT1P1-201ENST00000419974 PDPK1O15530 556 aa13.43□□□□□ -0.26
SHMT1P1-201ENST00000419974 CHST10O43529 356 aa13.43□□□□□ -0.26
SHMT1P1-201ENST00000419974 B3GALT4O96024 378 aa13.43□□□□□ -0.26
SHMT1P1-201ENST00000419974 GPX2P18283 190 aa13.43□□□□□ -0.26
SHMT1P1-201ENST00000419974 GALNSP34059 522 aa13.43□□□□□ -0.26
SHMT1P1-201ENST00000419974 MPIP34949 423 aa13.43□□□□□ -0.26
SHMT1P1-201ENST00000419974 HSD17B7P56937 341 aa13.43□□□□□ -0.26
SHMT1P1-201ENST00000419974 HBA1P69905 142 aa13.43□□□□□ -0.26
SHMT1P1-201ENST00000419974 SIM1P81133 766 aaPredicted RBP13.43□□□□□ -0.26
SHMT1P1-201ENST00000419974 INSM1Q01101 510 aaPredicted RBP13.43□□□□□ -0.26
SHMT1P1-201ENST00000419974 NET1Q7Z628 596 aaPredicted RBP13.43□□□□□ -0.26
SHMT1P1-201ENST00000419974 PPP1R3BQ86XI6 285 aa13.43□□□□□ -0.26
SHMT1P1-201ENST00000419974 PTRH1Q86Y79 214 aaKnown RBP13.43□□□□□ -0.26
SHMT1P1-201ENST00000419974 EFCAB3Q8N7B9 438 aa13.43□□□□□ -0.26
SHMT1P1-201ENST00000419974 OR4K14Q8NGD5 310 aa13.43□□□□□ -0.26
SHMT1P1-201ENST00000419974 CDC26Q8NHZ8 85 aa13.43□□□□□ -0.26
SHMT1P1-201ENST00000419974 SUN3Q8TAQ9 357 aa13.43□□□□□ -0.26
SHMT1P1-201ENST00000419974 MOAP1Q96BY2 351 aa13.43□□□□□ -0.26
SHMT1P1-201ENST00000419974 CNRIP1Q96F85 164 aaPredicted RBP13.43□□□□□ -0.26
SHMT1P1-201ENST00000419974 AMDHD1Q96NU7 426 aa13.43□□□□□ -0.26
SHMT1P1-201ENST00000419974 CMKLR1Q99788 373 aa13.43□□□□□ -0.26
SHMT1P1-201ENST00000419974 CPPED1Q9BRF8 314 aaPredicted RBP13.43□□□□□ -0.26
SHMT1P1-201ENST00000419974 TRIM4Q9C037 500 aa13.43□□□□□ -0.26
SHMT1P1-201ENST00000419974 MUC13Q9H3R2 512 aa13.43□□□□□ -0.26
SHMT1P1-201ENST00000419974 SLAMF7Q9NQ25 335 aa13.43□□□□□ -0.26
SHMT1P1-201ENST00000419974 GIMAP4Q9NUV9 329 aa13.43□□□□□ -0.26
SHMT1P1-201ENST00000419974 AKAP7Q9P0M2 348 aaPredicted RBP13.43□□□□□ -0.26
SHMT1P1-201ENST00000419974 FBXW2Q9UKT8 454 aa13.43□□□□□ -0.26
SHMT1P1-201ENST00000419974 VPS4AQ9UN37 437 aa13.43□□□□□ -0.26
SHMT1P1-201ENST00000419974 RRP15Q9Y3B9 282 aaKnown RBP13.43□□□□□ -0.26
SHMT1P1-201ENST00000419974 ZNF780BQ9Y6R6 833 aa13.43□□□□□ -0.26
SHMT1P1-201ENST00000419974 A0A0A6YYC8 382 aaPredicted RBP13.42□□□□□ -0.26
SHMT1P1-201ENST00000419974 I3L1I5 382 aaPredicted RBP13.42□□□□□ -0.26
SHMT1P1-201ENST00000419974 SGK494L7N484 410 aa13.42□□□□□ -0.26
SHMT1P1-201ENST00000419974 PLOD2O00469 737 aa13.42□□□□□ -0.26
SHMT1P1-201ENST00000419974 CTNSO60931 367 aa13.42□□□□□ -0.26
SHMT1P1-201ENST00000419974 GPR75O95800 540 aa13.42□□□□□ -0.26
SHMT1P1-201ENST00000419974 ATP1B1P05026 303 aa13.42□□□□□ -0.26
SHMT1P1-201ENST00000419974 CSNK2A2P19784 350 aaPredicted RBP13.42□□□□□ -0.26
SHMT1P1-201ENST00000419974 ME2P23368 584 aa13.42□□□□□ -0.26
SHMT1P1-201ENST00000419974 NTSP30990 170 aa13.42□□□□□ -0.26
SHMT1P1-201ENST00000419974 RAB15P59190 212 aa13.42□□□□□ -0.26
SHMT1P1-201ENST00000419974 TRAP1Q12931 704 aaKnown RBP13.42□□□□□ -0.26
SHMT1P1-201ENST00000419974 C16orf72Q14CZ0 275 aa13.42□□□□□ -0.26
SHMT1P1-201ENST00000419974 TRIP6Q15654 476 aaKnown RBP13.42□□□□□ -0.26
SHMT1P1-201ENST00000419974 C6orf10Q5SRN2 563 aa13.42□□□□□ -0.26
SHMT1P1-201ENST00000419974 ANKRD26P1Q6NSI1 321 aa13.42□□□□□ -0.26
SHMT1P1-201ENST00000419974 RIPOR1Q6ZS17 1223 aa13.42□□□□□ -0.26
SHMT1P1-201ENST00000419974 B3GNT8Q7Z7M8 397 aa13.42□□□□□ -0.26
SHMT1P1-201ENST00000419974 SERPINA11Q86U17 422 aa13.42□□□□□ -0.26
SHMT1P1-201ENST00000419974 CALHM3Q86XJ0 350 aa13.42□□□□□ -0.26
SHMT1P1-201ENST00000419974 MMP21Q8N119 569 aa13.42□□□□□ -0.26
SHMT1P1-201ENST00000419974 RCBTB1Q8NDN9 531 aa13.42□□□□□ -0.26
SHMT1P1-201ENST00000419974 ZFP90Q8TF47 636 aa13.42□□□□□ -0.26
SHMT1P1-201ENST00000419974 TBC1D20Q96BZ9 403 aa13.42□□□□□ -0.26
SHMT1P1-201ENST00000419974 ASB9Q96DX5 294 aa13.42□□□□□ -0.26
SHMT1P1-201ENST00000419974 OR6C1Q96RD1 312 aa13.42□□□□□ -0.26
SHMT1P1-201ENST00000419974 INPP5KQ9BT40 448 aa13.42□□□□□ -0.26
SHMT1P1-201ENST00000419974 STRADBQ9C0K7 418 aa13.42□□□□□ -0.26
SHMT1P1-201ENST00000419974 KAT8Q9H7Z6 458 aaKnown RBP13.42□□□□□ -0.26
SHMT1P1-201ENST00000419974 CMTM6Q9NX76 183 aa13.42□□□□□ -0.26
SHMT1P1-201ENST00000419974 SUCOQ9UBS9 1254 aaKnown RBP13.42□□□□□ -0.26
SHMT1P1-201ENST00000419974 SLC7A8Q9UHI5 535 aa13.42□□□□□ -0.26
SHMT1P1-201ENST00000419974 MMACHCQ9Y4U1 282 aa13.42□□□□□ -0.26
SHMT1P1-201ENST00000419974 SEC23IPQ9Y6Y8 1000 aaKnown RBP13.42□□□□□ -0.26
SHMT1P1-201ENST00000419974 ADAMTS20P59510 1910 aa13.42□□□□□ -0.26
SHMT1P1-201ENST00000419974 COL27A1Q8IZC6 1860 aaPredicted RBP13.42□□□□□ -0.26
SHMT1P1-201ENST00000419974 ASPMQ8IZT6 3477 aa13.42□□□□□ -0.26
SHMT1P1-201ENST00000419974 UNC13CQ8NB66 2214 aa13.42□□□□□ -0.26
SHMT1P1-201ENST00000419974 PRORSD1PA6NEY8 169 aa13.41□□□□□ -0.26
SHMT1P1-201ENST00000419974 NME4O00746 187 aa13.41□□□□□ -0.26
SHMT1P1-201ENST00000419974 CLDN4O14493 209 aa13.41□□□□□ -0.26
SHMT1P1-201ENST00000419974 DNAJB6O75190 326 aa13.41□□□□□ -0.26
SHMT1P1-201ENST00000419974 RDH16O75452 317 aa13.41□□□□□ -0.26
SHMT1P1-201ENST00000419974 BMP2P12643 396 aa13.41□□□□□ -0.26
SHMT1P1-201ENST00000419974 UQCRC2P22695 453 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms