RNA–Protein interactions for RNA: ENST00000418170.5

HMGXB4-202, Transcript of HMG-box containing 4, humanhuman

TSL 1 (best)

Gene HMGXB4, Length 4,216 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-202ENST00000418170 M0R233 179 aa7.65□□□□□ -1.18
HMGXB4-202ENST00000418170 YY2O15391 372 aa7.65□□□□□ -1.18
HMGXB4-202ENST00000418170 PCDH7O60245 1069 aa7.65□□□□□ -1.18
HMGXB4-202ENST00000418170 TSPAN3O60637 253 aa7.65□□□□□ -1.18
HMGXB4-202ENST00000418170 PAHP00439 452 aa7.65□□□□□ -1.18
HMGXB4-202ENST00000418170 PPIBP23284 216 aaKnown RBP7.65□□□□□ -1.18
HMGXB4-202ENST00000418170 BTCP35070 178 aa7.65□□□□□ -1.18
HMGXB4-202ENST00000418170 ACLYP53396 1101 aa7.65□□□□□ -1.18
HMGXB4-202ENST00000418170 TPBGQ13641 420 aa7.65□□□□□ -1.18
HMGXB4-202ENST00000418170 BOP1Q14137 746 aaKnown RBP7.65□□□□□ -1.18
HMGXB4-202ENST00000418170 PCBP1Q15365 356 aaKnown RBP eCLIP7.65□□□□□ -1.184e-10■■■■□ 20
HMGXB4-202ENST00000418170 DUSP6Q16828 381 aa7.65□□□□□ -1.18
HMGXB4-202ENST00000418170 SPIN4Q56A73 249 aa7.65□□□□□ -1.18
HMGXB4-202ENST00000418170 NHLRC3Q5JS37 347 aa7.65□□□□□ -1.18
HMGXB4-202ENST00000418170 PRAMEF18Q5VWM3 479 aa7.65□□□□□ -1.18
HMGXB4-202ENST00000418170 ZNF770Q6IQ21 691 aaPredicted RBP7.65□□□□□ -1.18
HMGXB4-202ENST00000418170 NOXRED1Q6NXP6 359 aa7.65□□□□□ -1.18
HMGXB4-202ENST00000418170 MOB2Q70IA6 237 aa7.65□□□□□ -1.18
HMGXB4-202ENST00000418170 WDR48Q8TAF3 677 aa7.65□□□□□ -1.18
HMGXB4-202ENST00000418170 CSGALNACT1Q8TDX6 532 aa7.65□□□□□ -1.18
HMGXB4-202ENST00000418170 ST8SIA2Q92186 375 aa7.65□□□□□ -1.18
HMGXB4-202ENST00000418170 COQ10AQ96MF6 247 aa7.65□□□□□ -1.18
HMGXB4-202ENST00000418170 FERD3LQ96RJ6 166 aa7.65□□□□□ -1.18
HMGXB4-202ENST00000418170 DPYSL5Q9BPU6 564 aa7.65□□□□□ -1.18
HMGXB4-202ENST00000418170 PELOQ9BRX2 385 aaKnown RBP7.65□□□□□ -1.18
HMGXB4-202ENST00000418170 HDHD2Q9H0R4 259 aa7.65□□□□□ -1.18
HMGXB4-202ENST00000418170 NMNAT1Q9HAN9 279 aaPredicted RBP7.65□□□□□ -1.18
HMGXB4-202ENST00000418170 NUDT15Q9NV35 164 aa7.65□□□□□ -1.18
HMGXB4-202ENST00000418170 FLRT1Q9NZU1 646 aa7.65□□□□□ -1.18
HMGXB4-202ENST00000418170 LIPT1Q9Y234 373 aa7.65□□□□□ -1.18
HMGXB4-202ENST00000418170 PIN4Q9Y237 131 aaKnown RBP7.65□□□□□ -1.18
HMGXB4-202ENST00000418170 TTC3P53804 2025 aa7.65□□□□□ -1.18
HMGXB4-202ENST00000418170 MEIKINA0A087WXM9 373 aa7.65□□□□□ -1.19
HMGXB4-202ENST00000418170 NUPL2O15504 423 aaKnown RBP7.65□□□□□ -1.19
HMGXB4-202ENST00000418170 RAMP2O60895 175 aa7.65□□□□□ -1.19
HMGXB4-202ENST00000418170 AMD1P17707 334 aa7.65□□□□□ -1.19
HMGXB4-202ENST00000418170 EPORP19235 508 aa7.65□□□□□ -1.19
HMGXB4-202ENST00000418170 FEN1P39748 380 aaKnown RBP7.65□□□□□ -1.19
HMGXB4-202ENST00000418170 ETV5P41161 510 aa7.65□□□□□ -1.19
HMGXB4-202ENST00000418170 DGKEP52429 567 aa7.65□□□□□ -1.19
HMGXB4-202ENST00000418170 ZXDBP98169 803 aa7.65□□□□□ -1.19
HMGXB4-202ENST00000418170 FABP5Q01469 135 aa7.65□□□□□ -1.19
HMGXB4-202ENST00000418170 C2orf80Q0P641 193 aa7.65□□□□□ -1.19
HMGXB4-202ENST00000418170 ELOAQ14241 798 aaKnown RBP7.65□□□□□ -1.19
HMGXB4-202ENST00000418170 HSD17B12Q53GQ0 312 aa7.65□□□□□ -1.19
HMGXB4-202ENST00000418170 C12orf73Q69YU5 71 aa7.65□□□□□ -1.19
HMGXB4-202ENST00000418170 CD200R1LQ6Q8B3 271 aa7.65□□□□□ -1.19
HMGXB4-202ENST00000418170 TMEM91Q6ZNR0 172 aa7.65□□□□□ -1.19
HMGXB4-202ENST00000418170 STK40Q8N2I9 435 aa7.65□□□□□ -1.19
HMGXB4-202ENST00000418170 SIPA1Q96FS4 1042 aa7.65□□□□□ -1.19
HMGXB4-202ENST00000418170 SERPINB11Q96P15 392 aa7.65□□□□□ -1.19
HMGXB4-202ENST00000418170 SMIM14Q96QK8 99 aa7.65□□□□□ -1.19
HMGXB4-202ENST00000418170 ABCG5Q9H222 651 aa7.65□□□□□ -1.19
HMGXB4-202ENST00000418170 KCTD5Q9NXV2 234 aa7.65□□□□□ -1.19
HMGXB4-202ENST00000418170 TAS2R7Q9NYW3 318 aa7.65□□□□□ -1.19
HMGXB4-202ENST00000418170 HCN2Q9UL51 889 aa7.65□□□□□ -1.19
HMGXB4-202ENST00000418170 FNDC3AQ9Y2H6 1198 aaKnown RBP7.65□□□□□ -1.19
HMGXB4-202ENST00000418170 IGLV3-10A0A075B6K4 115 aa7.64□□□□□ -1.19
HMGXB4-202ENST00000418170 TRAV6A0A075B6T7 132 aa7.64□□□□□ -1.19
HMGXB4-202ENST00000418170 A8MXK9 166 aa7.64□□□□□ -1.19
HMGXB4-202ENST00000418170 H3BRB1 525 aa7.64□□□□□ -1.19
HMGXB4-202ENST00000418170 CASC3O15234 703 aaKnown RBP7.64□□□□□ -1.19
HMGXB4-202ENST00000418170 PRAMEF11O60813 436 aa7.64□□□□□ -1.19
HMGXB4-202ENST00000418170 ZNF865P0CJ78 1059 aaPredicted RBP7.64□□□□□ -1.19
HMGXB4-202ENST00000418170 COX7A2P14406 83 aa7.64□□□□□ -1.19
HMGXB4-202ENST00000418170 DARSP14868 501 aaKnown RBP7.64□□□□□ -1.19
HMGXB4-202ENST00000418170 PCSK1P29120 753 aa7.64□□□□□ -1.19
HMGXB4-202ENST00000418170 GABRA5P31644 462 aa7.64□□□□□ -1.19
HMGXB4-202ENST00000418170 WNT4P56705 351 aa7.64□□□□□ -1.19
HMGXB4-202ENST00000418170 S100A12P80511 92 aa7.64□□□□□ -1.19
HMGXB4-202ENST00000418170 FLI1Q01543 452 aaPredicted RBP7.64□□□□□ -1.19
HMGXB4-202ENST00000418170 OCLNQ16625 522 aa7.64□□□□□ -1.19
HMGXB4-202ENST00000418170 SPDYE7PQ495Y7 208 aa7.64□□□□□ -1.19
HMGXB4-202ENST00000418170 MPPE1Q53F39 396 aa7.64□□□□□ -1.19
HMGXB4-202ENST00000418170 MS4A13Q5J8X5 152 aa7.64□□□□□ -1.19
HMGXB4-202ENST00000418170 UBXN11Q5T124 520 aa7.64□□□□□ -1.19
HMGXB4-202ENST00000418170 MZT2AQ6P582 158 aa7.64□□□□□ -1.19
HMGXB4-202ENST00000418170 RRM2BQ7LG56 351 aa7.64□□□□□ -1.19
HMGXB4-202ENST00000418170 SCD5Q86SK9 330 aa7.64□□□□□ -1.19
HMGXB4-202ENST00000418170 SYT12Q8IV01 421 aa7.64□□□□□ -1.19
HMGXB4-202ENST00000418170 NAGSQ8N159 534 aa7.64□□□□□ -1.19
HMGXB4-202ENST00000418170 OR52I1Q8NGK6 324 aa7.64□□□□□ -1.19
HMGXB4-202ENST00000418170 OR8J1Q8NGP2 316 aa7.64□□□□□ -1.19
HMGXB4-202ENST00000418170 TCF25Q9BQ70 676 aa7.64□□□□□ -1.19
HMGXB4-202ENST00000418170 OR51B5Q9H339 312 aa7.64□□□□□ -1.19
HMGXB4-202ENST00000418170 DLL4Q9NR61 685 aa7.64□□□□□ -1.19
HMGXB4-202ENST00000418170 REV1Q9UBZ9 1251 aa7.64□□□□□ -1.19
HMGXB4-202ENST00000418170 SCP2D1Q9UJQ7 156 aa7.64□□□□□ -1.19
HMGXB4-202ENST00000418170 PCDHB1Q9Y5F3 818 aa7.64□□□□□ -1.19
HMGXB4-202ENST00000418170 GPR171O14626 319 aa7.64□□□□□ -1.19
HMGXB4-202ENST00000418170 LANCL1O43813 399 aa7.64□□□□□ -1.19
HMGXB4-202ENST00000418170 SLC19A2O60779 497 aa7.64□□□□□ -1.19
HMGXB4-202ENST00000418170 STK16O75716 305 aa7.64□□□□□ -1.19
HMGXB4-202ENST00000418170 RAB36O95755 333 aa7.64□□□□□ -1.19
HMGXB4-202ENST00000418170 SULT1A3P0DMM9 295 aa7.64□□□□□ -1.19
HMGXB4-202ENST00000418170 SULT1A4P0DMN0 295 aa7.64□□□□□ -1.19
HMGXB4-202ENST00000418170 OSMP13725 252 aa7.64□□□□□ -1.19
HMGXB4-202ENST00000418170 ACVRL1P37023 503 aa7.64□□□□□ -1.19
HMGXB4-202ENST00000418170 GSTM5P46439 218 aa7.64□□□□□ -1.19
HMGXB4-202ENST00000418170 RGS4P49798 205 aa7.64□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms