RNA–Protein interactions for RNA: ENST00000417448.1

VCP-202, Transcript of valosin containing protein, humanhuman

TSL 3

Gene VCP, Length 722 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-202ENST00000417448 MYRIPQ8NFW9 859 aa16.78■□□□□ 0.28
VCP-202ENST00000417448 HUS1BQ8NHY5 278 aa16.78■□□□□ 0.28
VCP-202ENST00000417448 ZNF473Q8WTR7 871 aaKnown RBP16.78■□□□□ 0.28
VCP-202ENST00000417448 MS4A6EQ96DS6 147 aa16.78■□□□□ 0.28
VCP-202ENST00000417448 SMIM10Q96HG1 83 aa16.78■□□□□ 0.28
VCP-202ENST00000417448 SMC6Q96SB8 1091 aa16.78■□□□□ 0.28
VCP-202ENST00000417448 MECRQ9BV79 373 aa16.78■□□□□ 0.28
VCP-202ENST00000417448 SORBS1Q9BX66 1292 aaKnown RBP16.78■□□□□ 0.28
VCP-202ENST00000417448 SHCBP1LQ9BZQ2 653 aa16.78■□□□□ 0.28
VCP-202ENST00000417448 UCK2Q9BZX2 261 aa16.78■□□□□ 0.28
VCP-202ENST00000417448 RHBGQ9H310 441 aa16.78■□□□□ 0.28
VCP-202ENST00000417448 OR51B5Q9H339 312 aa16.78■□□□□ 0.28
VCP-202ENST00000417448 LIME1Q9H400 295 aa16.78■□□□□ 0.28
VCP-202ENST00000417448 COQ3Q9NZJ6 369 aa16.78■□□□□ 0.28
VCP-202ENST00000417448 CDC14AQ9UNH5 594 aa16.78■□□□□ 0.28
VCP-202ENST00000417448 A8MUI8 341 aa16.77■□□□□ 0.28
VCP-202ENST00000417448 ERI3O43414 337 aaKnown RBP16.77■□□□□ 0.28
VCP-202ENST00000417448 GALR3O60755 368 aaPredicted RBP16.77■□□□□ 0.28
VCP-202ENST00000417448 CLEC3AO75596 197 aa16.77■□□□□ 0.28
VCP-202ENST00000417448 NSA2O95478 260 aaKnown RBP16.77■□□□□ 0.28
VCP-202ENST00000417448 MLYCDO95822 493 aa16.77■□□□□ 0.28
VCP-202ENST00000417448 HEXBP07686 556 aa16.77■□□□□ 0.28
VCP-202ENST00000417448 MSX1P28360 303 aa16.77■□□□□ 0.28
VCP-202ENST00000417448 NAGLUP54802 743 aa16.77■□□□□ 0.28
VCP-202ENST00000417448 RPS13P62277 151 aaKnown RBP16.77■□□□□ 0.28
VCP-202ENST00000417448 LTBQ06643 244 aa16.77■□□□□ 0.28
VCP-202ENST00000417448 PCDH1Q08174 1060 aa16.77■□□□□ 0.28
VCP-202ENST00000417448 PCLAFQ15004 111 aa16.77■□□□□ 0.28
VCP-202ENST00000417448 CEBPEQ15744 281 aa16.77■□□□□ 0.28
VCP-202ENST00000417448 RNFT1Q5M7Z0 435 aa16.77■□□□□ 0.28
VCP-202ENST00000417448 TCHHL1Q5QJ38 904 aaPredicted RBP16.77■□□□□ 0.28
VCP-202ENST00000417448 LIPJQ5W064 366 aa16.77■□□□□ 0.28
VCP-202ENST00000417448 SPINK14Q6IE38 97 aa16.77■□□□□ 0.28
VCP-202ENST00000417448 LETMD1Q6P1Q0 360 aa16.77■□□□□ 0.28
VCP-202ENST00000417448 LRIG3Q6UXM1 1119 aa16.77■□□□□ 0.28
VCP-202ENST00000417448 UBE3DQ7Z6J8 389 aa16.77■□□□□ 0.28
VCP-202ENST00000417448 ZC3H7AQ8IWR0 971 aaKnown RBP16.77■□□□□ 0.28
VCP-202ENST00000417448 GHDCQ8N2G8 530 aa16.77■□□□□ 0.28
VCP-202ENST00000417448 L3MBTL4Q8NA19 623 aa16.77■□□□□ 0.28
VCP-202ENST00000417448 OR51Q1Q8NH59 317 aa16.77■□□□□ 0.28
VCP-202ENST00000417448 NINJ1Q92982 152 aa16.77■□□□□ 0.28
VCP-202ENST00000417448 PEX11GQ96HA9 241 aa16.77■□□□□ 0.28
VCP-202ENST00000417448 NPAS2Q99743 824 aa16.77■□□□□ 0.28
VCP-202ENST00000417448 C1QTNF3Q9BXJ4 246 aa16.77■□□□□ 0.28
VCP-202ENST00000417448 IQCGQ9H095 443 aaKnown RBP16.77■□□□□ 0.28
VCP-202ENST00000417448 GSTO2Q9H4Y5 243 aa16.77■□□□□ 0.28
VCP-202ENST00000417448 FARSBQ9NSD9 589 aaKnown RBP16.77■□□□□ 0.28
VCP-202ENST00000417448 TEKT2Q9UIF3 430 aa16.77■□□□□ 0.28
VCP-202ENST00000417448 SLC22A7Q9Y694 548 aa16.77■□□□□ 0.28
VCP-202ENST00000417448 IGHV3-20A0A0C4DH32 117 aa16.76■□□□□ 0.27
VCP-202ENST00000417448 FAM90A27PA6NNH2 459 aa16.76■□□□□ 0.27
VCP-202ENST00000417448 MAGEB17A8MXT2 336 aa16.76■□□□□ 0.27
VCP-202ENST00000417448 CHST10O43529 356 aa16.76■□□□□ 0.27
VCP-202ENST00000417448 MAN1A2O60476 641 aa16.76■□□□□ 0.27
VCP-202ENST00000417448 TOXO94900 526 aa16.76■□□□□ 0.27
VCP-202ENST00000417448 ETHE1O95571 254 aa16.76■□□□□ 0.27
VCP-202ENST00000417448 ALDH3A1P30838 453 aa16.76■□□□□ 0.27
VCP-202ENST00000417448 CD96P40200 585 aa16.76■□□□□ 0.27
VCP-202ENST00000417448 RUNX2Q13950 521 aa16.76■□□□□ 0.27
VCP-202ENST00000417448 CASP8Q14790 479 aa16.76■□□□□ 0.27
VCP-202ENST00000417448 OR1C1Q15619 314 aa16.76■□□□□ 0.27
VCP-202ENST00000417448 ACER2Q5QJU3 275 aa16.76■□□□□ 0.27
VCP-202ENST00000417448 MFSD4BQ5TF39 518 aa16.76■□□□□ 0.27
VCP-202ENST00000417448 Q71RC1 249 aaPredicted RBP16.76■□□□□ 0.27
VCP-202ENST00000417448 SLC22A9Q8IVM8 553 aa16.76■□□□□ 0.27
VCP-202ENST00000417448 TTLQ8NG68 377 aa16.76■□□□□ 0.27
VCP-202ENST00000417448 L3HYPDHQ96EM0 354 aa16.76■□□□□ 0.27
VCP-202ENST00000417448 MVB12AQ96EY5 273 aa16.76■□□□□ 0.27
VCP-202ENST00000417448 KCNA7Q96RP8 456 aa16.76■□□□□ 0.27
VCP-202ENST00000417448 MDFIQ99750 246 aa16.76■□□□□ 0.27
VCP-202ENST00000417448 SMR3AQ99954 134 aa16.76■□□□□ 0.27
VCP-202ENST00000417448 TUBB6Q9BUF5 446 aa16.76■□□□□ 0.27
VCP-202ENST00000417448 NTMT1Q9BV86 223 aa16.76■□□□□ 0.27
VCP-202ENST00000417448 MS4A8Q9BY19 250 aa16.76■□□□□ 0.27
VCP-202ENST00000417448 KCNN3Q9UGI6 736 aa16.76■□□□□ 0.27
VCP-202ENST00000417448 HRH3Q9Y5N1 445 aa16.76■□□□□ 0.27
VCP-202ENST00000417448 UBFD1O14562 309 aaKnown RBP16.75■□□□□ 0.27
VCP-202ENST00000417448 PRRG2O14669 202 aa16.75■□□□□ 0.27
VCP-202ENST00000417448 TYROBPO43914 113 aa16.75■□□□□ 0.27
VCP-202ENST00000417448 CDC123O75794 336 aaPredicted RBP16.75■□□□□ 0.27
VCP-202ENST00000417448 ICAM2P13598 275 aa16.75■□□□□ 0.27
VCP-202ENST00000417448 FOSL1P15407 271 aa16.75■□□□□ 0.27
VCP-202ENST00000417448 XCR1P46094 333 aa16.75■□□□□ 0.27
VCP-202ENST00000417448 STXBP1P61764 594 aaKnown RBP16.75■□□□□ 0.27
VCP-202ENST00000417448 AP2B1P63010 937 aa16.75■□□□□ 0.27
VCP-202ENST00000417448 FOLH1Q04609 750 aa16.75■□□□□ 0.27
VCP-202ENST00000417448 MPP2Q14168 576 aa16.75■□□□□ 0.27
VCP-202ENST00000417448 HERC3Q15034 1050 aa16.75■□□□□ 0.27
VCP-202ENST00000417448 TTC19Q6DKK2 380 aaPredicted RBP16.75■□□□□ 0.27
VCP-202ENST00000417448 H3F3CQ6NXT2 135 aa16.75■□□□□ 0.27
VCP-202ENST00000417448 METTL2BQ6P1Q9 378 aaKnown RBP16.75■□□□□ 0.27
VCP-202ENST00000417448 SCIMPQ6UWF3 145 aa16.75■□□□□ 0.27
VCP-202ENST00000417448 ABHD13Q7L211 337 aa16.75■□□□□ 0.27
VCP-202ENST00000417448 GALNTL5Q7Z4T8 443 aa16.75■□□□□ 0.27
VCP-202ENST00000417448 PNPLA5Q7Z6Z6 429 aaPredicted RBP16.75■□□□□ 0.27
VCP-202ENST00000417448 CDYL2Q8N8U2 506 aa16.75■□□□□ 0.27
VCP-202ENST00000417448 QRFPRQ96P65 431 aa16.75■□□□□ 0.27
VCP-202ENST00000417448 HBEGFQ99075 208 aa16.75■□□□□ 0.27
VCP-202ENST00000417448 GATA5Q9BWX5 397 aaPredicted RBP16.75■□□□□ 0.27
VCP-202ENST00000417448 TGIF2Q9GZN2 237 aa16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms