RNA–Protein interactions for RNA: ENST00000417033.1

MDC1-203, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 2

Gene MDC1, Length 916 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-203ENST00000417033 CPSF7Q8N684 471 aaKnown RBP7.58□□□□□ -1.2
MDC1-203ENST00000417033 POU5F2Q8N7G0 328 aa7.58□□□□□ -1.2
MDC1-203ENST00000417033 ENDOVQ8N8Q3 282 aaKnown RBP7.58□□□□□ -1.2
MDC1-203ENST00000417033 NLGN4YQ8NFZ3 816 aaPredicted RBP7.58□□□□□ -1.2
MDC1-203ENST00000417033 DNAJB14Q8TBM8 379 aa7.58□□□□□ -1.2
MDC1-203ENST00000417033 VPS33AQ96AX1 596 aa7.58□□□□□ -1.2
MDC1-203ENST00000417033 TBC1D20Q96BZ9 403 aa7.58□□□□□ -1.2
MDC1-203ENST00000417033 NXPE2Q96DL1 559 aa7.58□□□□□ -1.2
MDC1-203ENST00000417033 ERP27Q96DN0 273 aa7.58□□□□□ -1.2
MDC1-203ENST00000417033 NAF1Q96HR8 494 aaKnown RBP7.58□□□□□ -1.2
MDC1-203ENST00000417033 ZPBPQ9BS86 351 aa7.58□□□□□ -1.2
MDC1-203ENST00000417033 DPY30Q9C005 99 aa7.58□□□□□ -1.2
MDC1-203ENST00000417033 VN1R1Q9GZP7 353 aa7.58□□□□□ -1.2
MDC1-203ENST00000417033 REEP4Q9H6H4 257 aa7.58□□□□□ -1.2
MDC1-203ENST00000417033 RPF2Q9H7B2 306 aaKnown RBP7.58□□□□□ -1.2
MDC1-203ENST00000417033 SLC52A3Q9NQ40 469 aa7.58□□□□□ -1.2
MDC1-203ENST00000417033 PRTFDC1Q9NRG1 225 aa7.58□□□□□ -1.2
MDC1-203ENST00000417033 CCDC167Q9P0B6 97 aa7.58□□□□□ -1.2
MDC1-203ENST00000417033 IL17BQ9UHF5 180 aa7.58□□□□□ -1.2
MDC1-203ENST00000417033 ATP6V1HQ9UI12 483 aa7.58□□□□□ -1.2
MDC1-203ENST00000417033 PHF11Q9UIL8 331 aa7.58□□□□□ -1.2
MDC1-203ENST00000417033 NEUROG3Q9Y4Z2 214 aa7.58□□□□□ -1.2
MDC1-203ENST00000417033 IGKV3D-11A0A0A0MRZ8 115 aa7.57□□□□□ -1.2
MDC1-203ENST00000417033 IGHV3-20A0A0C4DH32 117 aa7.57□□□□□ -1.2
MDC1-203ENST00000417033 VSTM2BA6NLU5 285 aa7.57□□□□□ -1.2
MDC1-203ENST00000417033 STMND1H3BQB6 276 aa7.57□□□□□ -1.2
MDC1-203ENST00000417033 MASP2O00187 686 aa7.57□□□□□ -1.2
MDC1-203ENST00000417033 PSMD12O00232 456 aaPredicted RBP7.57□□□□□ -1.2
MDC1-203ENST00000417033 ERAL1O75616 437 aaKnown RBP7.57□□□□□ -1.2
MDC1-203ENST00000417033 SLC22A3O75751 556 aa7.57□□□□□ -1.2
MDC1-203ENST00000417033 KLF7O75840 302 aaPredicted RBP7.57□□□□□ -1.2
MDC1-203ENST00000417033 C1QCP02747 245 aa7.57□□□□□ -1.2
MDC1-203ENST00000417033 KLK3P07288 261 aaPredicted RBP7.57□□□□□ -1.2
MDC1-203ENST00000417033 ZGLP1P0C6A0 271 aa7.57□□□□□ -1.2
MDC1-203ENST00000417033 COX7A2P14406 83 aa7.57□□□□□ -1.2
MDC1-203ENST00000417033 TCN2P20062 427 aa7.57□□□□□ -1.2
MDC1-203ENST00000417033 AGXTP21549 392 aa7.57□□□□□ -1.2
MDC1-203ENST00000417033 JAK1P23458 1154 aa7.57□□□□□ -1.2
MDC1-203ENST00000417033 SOX18P35713 384 aa7.57□□□□□ -1.2
MDC1-203ENST00000417033 HPCAL1P37235 193 aa7.57□□□□□ -1.2
MDC1-203ENST00000417033 FEN1P39748 380 aaKnown RBP7.57□□□□□ -1.2
MDC1-203ENST00000417033 BUD31P41223 144 aaPredicted RBP7.57□□□□□ -1.2
MDC1-203ENST00000417033 ASMTP46597 345 aa7.57□□□□□ -1.2
MDC1-203ENST00000417033 MRPL19P49406 292 aaKnown RBP7.57□□□□□ -1.2
MDC1-203ENST00000417033 C21orf58P58505 322 aa7.57□□□□□ -1.2
MDC1-203ENST00000417033 STX1BP61266 288 aa7.57□□□□□ -1.2
MDC1-203ENST00000417033 PLIN5Q00G26 463 aa7.57□□□□□ -1.2
MDC1-203ENST00000417033 FOLH1Q04609 750 aa7.57□□□□□ -1.2
MDC1-203ENST00000417033 DNASE1L3Q13609 305 aa7.57□□□□□ -1.2
MDC1-203ENST00000417033 RPS6KA2Q15349 733 aa7.57□□□□□ -1.2
MDC1-203ENST00000417033 PGS1Q32NB8 556 aa7.57□□□□□ -1.2
MDC1-203ENST00000417033 TBC1D25Q3MII6 688 aa7.57□□□□□ -1.2
MDC1-203ENST00000417033 FAM174BQ3ZCQ3 159 aa7.57□□□□□ -1.2
MDC1-203ENST00000417033 GTDC1Q4AE62 458 aa7.57□□□□□ -1.2
MDC1-203ENST00000417033 TIGD2Q4W5G0 525 aa7.57□□□□□ -1.2
MDC1-203ENST00000417033 METTL21CQ5VZV1 264 aa7.57□□□□□ -1.2
MDC1-203ENST00000417033 OR52E8Q6IFG1 317 aa7.57□□□□□ -1.2
MDC1-203ENST00000417033 DNAJC14Q6Y2X3 702 aaPredicted RBP7.57□□□□□ -1.2
MDC1-203ENST00000417033 IKBIPQ70UQ0 350 aa7.57□□□□□ -1.2
MDC1-203ENST00000417033 ANKRD46Q86W74 232 aa7.57□□□□□ -1.2
MDC1-203ENST00000417033 DTX1Q86Y01 620 aa7.57□□□□□ -1.2
MDC1-203ENST00000417033 HOMEZQ8IX15 550 aa7.57□□□□□ -1.2
MDC1-203ENST00000417033 CLECL1Q8IZS7 167 aa7.57□□□□□ -1.2
MDC1-203ENST00000417033 ESX1Q8N693 406 aa7.57□□□□□ -1.2
MDC1-203ENST00000417033 NKD1Q969G9 470 aa7.57□□□□□ -1.2
MDC1-203ENST00000417033 FKBP10Q96AY3 582 aa7.57□□□□□ -1.2
MDC1-203ENST00000417033 MIEF2Q96C03 454 aa7.57□□□□□ -1.2
MDC1-203ENST00000417033 PPCDCQ96CD2 204 aa7.57□□□□□ -1.2
MDC1-203ENST00000417033 KLHL29Q96CT2 875 aa7.57□□□□□ -1.2
MDC1-203ENST00000417033 CNRIP1Q96F85 164 aaPredicted RBP7.57□□□□□ -1.2
MDC1-203ENST00000417033 OCSTAMPQ9BR26 566 aa7.57□□□□□ -1.2
MDC1-203ENST00000417033 CCDC106Q9BWC9 280 aa7.57□□□□□ -1.2
MDC1-203ENST00000417033 FAIM2Q9BWQ8 316 aa7.57□□□□□ -1.2
MDC1-203ENST00000417033 TRIM4Q9C037 500 aa7.57□□□□□ -1.2
MDC1-203ENST00000417033 CLMPQ9H6B4 373 aa7.57□□□□□ -1.2
MDC1-203ENST00000417033 MKKSQ9NPJ1 570 aaPredicted RBP7.57□□□□□ -1.2
MDC1-203ENST00000417033 MIEF1Q9NQG6 463 aa7.57□□□□□ -1.2
MDC1-203ENST00000417033 THSD1Q9NS62 852 aa7.57□□□□□ -1.2
MDC1-203ENST00000417033 ARL8BQ9NVJ2 186 aa7.57□□□□□ -1.2
MDC1-203ENST00000417033 ZIM2Q9NZV7 527 aa7.57□□□□□ -1.2
MDC1-203ENST00000417033 SH3BP4Q9P0V3 963 aa7.57□□□□□ -1.2
MDC1-203ENST00000417033 ZNF282Q9UDV7 671 aaPredicted RBP7.57□□□□□ -1.2
MDC1-203ENST00000417033 UTS2RQ9UKP6 389 aa7.57□□□□□ -1.2
MDC1-203ENST00000417033 PADI1Q9ULC6 663 aa7.57□□□□□ -1.2
MDC1-203ENST00000417033 MKL2Q9ULH7 1088 aa7.57□□□□□ -1.2
MDC1-203ENST00000417033 TRIM33Q9UPN9 1127 aa7.57□□□□□ -1.2
MDC1-203ENST00000417033 ERVK-11Q9UQG0 969 aa7.57□□□□□ -1.2
MDC1-203ENST00000417033 MSRB2Q9Y3D2 182 aa7.57□□□□□ -1.2
MDC1-203ENST00000417033 PTRH2Q9Y3E5 179 aaKnown RBP7.57□□□□□ -1.2
MDC1-203ENST00000417033 CAPN7Q9Y6W3 813 aa7.57□□□□□ -1.2
MDC1-203ENST00000417033 PCSK5Q92824 1860 aa7.57□□□□□ -1.2
MDC1-203ENST00000417033 CCDC88CQ9P219 2028 aa7.57□□□□□ -1.2
MDC1-203ENST00000417033 NUP210LQ5VU65 1888 aa7.56□□□□□ -1.2
MDC1-203ENST00000417033 DMXL1Q9Y485 3027 aa7.56□□□□□ -1.2
MDC1-203ENST00000417033 C1orf226A1L170 272 aa7.56□□□□□ -1.2
MDC1-203ENST00000417033 POM121CA8CG34 1229 aa7.56□□□□□ -1.2
MDC1-203ENST00000417033 A8MUA0 341 aa7.56□□□□□ -1.2
MDC1-203ENST00000417033 CAPN14A8MX76 684 aa7.56□□□□□ -1.2
MDC1-203ENST00000417033 IDSB3KWA1 339 aa7.56□□□□□ -1.2
MDC1-203ENST00000417033 IQCJ-SCHIP1C9J366 451 aaPredicted RBP7.56□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms