RNA–Protein interactions for RNA: ENST00000415950.4

SCN1B-202, Transcript of sodium voltage-gated channel beta subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SCN1B, Length 4,537 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1B-202ENST00000415950 TRIM36Q9NQ86 728 aa12.38□□□□□ -0.43
SCN1B-202ENST00000415950 TREX1Q9NSU2 369 aa12.38□□□□□ -0.43
SCN1B-202ENST00000415950 BLOC1S5-TXNDC5H3BN57 136 aa12.38□□□□□ -0.43
SCN1B-202ENST00000415950 M0R233 179 aa12.38□□□□□ -0.43
SCN1B-202ENST00000415950 PDCD5O14737 125 aa12.38□□□□□ -0.43
SCN1B-202ENST00000415950 GNG2P59768 71 aa12.38□□□□□ -0.43
SCN1B-202ENST00000415950 S100A10P60903 97 aa12.38□□□□□ -0.43
SCN1B-202ENST00000415950 RGMBQ6NW40 437 aa12.38□□□□□ -0.43
SCN1B-202ENST00000415950 TMEM207Q6UWW9 146 aa12.38□□□□□ -0.43
SCN1B-202ENST00000415950 CADM3Q8N126 398 aa12.38□□□□□ -0.43
SCN1B-202ENST00000415950 NAGSQ8N159 534 aa12.38□□□□□ -0.43
SCN1B-202ENST00000415950 YIPF7Q8N8F6 280 aa12.38□□□□□ -0.43
SCN1B-202ENST00000415950 FAM83FQ8NEG4 500 aaPredicted RBP12.38□□□□□ -0.43
SCN1B-202ENST00000415950 TMEM80Q96HE8 168 aa12.38□□□□□ -0.43
SCN1B-202ENST00000415950 DHRS1Q96LJ7 313 aa12.38□□□□□ -0.43
SCN1B-202ENST00000415950 CCM2Q9BSQ5 444 aa12.38□□□□□ -0.43
SCN1B-202ENST00000415950 GNG8Q9UK08 70 aa12.38□□□□□ -0.43
SCN1B-202ENST00000415950 CMAHPQ9Y471 501 aa12.38□□□□□ -0.43
SCN1B-202ENST00000415950 MYH14Q7Z406 1995 aaKnown RBP12.37□□□□□ -0.43
SCN1B-202ENST00000415950 INPPL1O15357 1258 aa12.37□□□□□ -0.43
SCN1B-202ENST00000415950 NDUFS4O43181 175 aa12.37□□□□□ -0.43
SCN1B-202ENST00000415950 B3GALT2O43825 422 aa12.37□□□□□ -0.43
SCN1B-202ENST00000415950 ARL6IP5O75915 188 aa12.37□□□□□ -0.43
SCN1B-202ENST00000415950 NPPAP01160 153 aa12.37□□□□□ -0.43
SCN1B-202ENST00000415950 PSMA6P60900 246 aaKnown RBP12.37□□□□□ -0.43
SCN1B-202ENST00000415950 APOFQ13790 326 aa12.37□□□□□ -0.43
SCN1B-202ENST00000415950 PON3Q15166 354 aa12.37□□□□□ -0.43
SCN1B-202ENST00000415950 BCL7AQ4VC05 210 aa12.37□□□□□ -0.43
SCN1B-202ENST00000415950 ATG9BQ674R7 924 aa12.37□□□□□ -0.43
SCN1B-202ENST00000415950 ZSWIM9Q86XI8 627 aa12.37□□□□□ -0.43
SCN1B-202ENST00000415950 CCDC28AQ8IWP9 274 aa12.37□□□□□ -0.43
SCN1B-202ENST00000415950 FAM46DQ8NEK8 389 aa12.37□□□□□ -0.43
SCN1B-202ENST00000415950 HERVK_113Q902F9 699 aa12.37□□□□□ -0.43
SCN1B-202ENST00000415950 TFGQ92734 400 aaPredicted RBP12.37□□□□□ -0.43
SCN1B-202ENST00000415950 GPR78Q96P69 363 aa12.37□□□□□ -0.43
SCN1B-202ENST00000415950 ABCG4Q9H172 646 aa12.37□□□□□ -0.43
SCN1B-202ENST00000415950 TUBB1Q9H4B7 451 aa12.37□□□□□ -0.43
SCN1B-202ENST00000415950 ATRXP46100 2492 aa12.37□□□□□ -0.43
SCN1B-202ENST00000415950 DUXAA6NLW8 204 aa12.37□□□□□ -0.43
SCN1B-202ENST00000415950 EEF1E1O43324 174 aaKnown RBP12.37□□□□□ -0.43
SCN1B-202ENST00000415950 APODP05090 189 aa12.37□□□□□ -0.43
SCN1B-202ENST00000415950 NUDT7P0C024 238 aa12.37□□□□□ -0.43
SCN1B-202ENST00000415950 C7P10643 843 aa12.37□□□□□ -0.43
SCN1B-202ENST00000415950 CCR8P51685 355 aa12.37□□□□□ -0.43
SCN1B-202ENST00000415950 CARD16Q5EG05 197 aa12.37□□□□□ -0.43
SCN1B-202ENST00000415950 NCEH1Q6PIU2 408 aa12.37□□□□□ -0.43
SCN1B-202ENST00000415950 Q8N402 240 aa12.37□□□□□ -0.43
SCN1B-202ENST00000415950 OR2AP1Q8NGE2 309 aa12.37□□□□□ -0.43
SCN1B-202ENST00000415950 NEIL3Q8TAT5 605 aa12.37□□□□□ -0.43
SCN1B-202ENST00000415950 ZNF471Q9BX82 626 aaPredicted RBP12.37□□□□□ -0.43
SCN1B-202ENST00000415950 SEC61A2Q9H9S3 476 aa12.37□□□□□ -0.43
SCN1B-202ENST00000415950 ZDHHC4Q9NPG8 344 aa12.37□□□□□ -0.43
SCN1B-202ENST00000415950 CUEDC1Q9NWM3 386 aaPredicted RBP12.37□□□□□ -0.43
SCN1B-202ENST00000415950 MRPL15Q9P015 296 aaKnown RBP12.37□□□□□ -0.43
SCN1B-202ENST00000415950 PLCL2Q9UPR0 1127 aa12.37□□□□□ -0.43
SCN1B-202ENST00000415950 UGT2A1Q9Y4X1 527 aa12.37□□□□□ -0.43
SCN1B-202ENST00000415950 APOC3P02656 99 aa12.37□□□□□ -0.43
SCN1B-202ENST00000415950 ZNF3P17036 446 aa12.37□□□□□ -0.43
SCN1B-202ENST00000415950 DCKP27707 260 aa12.37□□□□□ -0.43
SCN1B-202ENST00000415950 HNF1BP35680 557 aa12.37□□□□□ -0.43
SCN1B-202ENST00000415950 INHBEP58166 350 aa12.37□□□□□ -0.43
SCN1B-202ENST00000415950 KCTD11Q693B1 232 aa12.37□□□□□ -0.43
SCN1B-202ENST00000415950 MTFR2Q6P444 385 aa12.37□□□□□ -0.43
SCN1B-202ENST00000415950 BTLAQ7Z6A9 289 aa12.37□□□□□ -0.43
SCN1B-202ENST00000415950 GPALPP1Q8IXQ4 340 aa12.37□□□□□ -0.43
SCN1B-202ENST00000415950 CD200R1Q8TD46 325 aa12.37□□□□□ -0.43
SCN1B-202ENST00000415950 OTUB2Q96DC9 234 aa12.37□□□□□ -0.43
SCN1B-202ENST00000415950 CARS2Q9HA77 564 aaKnown RBP12.37□□□□□ -0.43
SCN1B-202ENST00000415950 STOX2Q9P2F5 926 aaPredicted RBP12.37□□□□□ -0.43
SCN1B-202ENST00000415950 SLCO3A1Q9UIG8 710 aa12.37□□□□□ -0.43
SCN1B-202ENST00000415950 EVPLQ92817 2033 aa12.37□□□□□ -0.43
SCN1B-202ENST00000415950 GPR89AB7ZAQ6 455 aa12.36□□□□□ -0.43
SCN1B-202ENST00000415950 CAPN5O15484 640 aaPredicted RBP12.36□□□□□ -0.43
SCN1B-202ENST00000415950 PCDHGA12O60330 932 aa12.36□□□□□ -0.43
SCN1B-202ENST00000415950 GPR89BP0CG08 455 aa12.36□□□□□ -0.43
SCN1B-202ENST00000415950 S100A2P29034 98 aa12.36□□□□□ -0.43
SCN1B-202ENST00000415950 BTN3A2P78410 334 aa12.36□□□□□ -0.43
SCN1B-202ENST00000415950 TMEM44Q2T9K0 475 aa12.36□□□□□ -0.43
SCN1B-202ENST00000415950 SPIN4Q56A73 249 aa12.36□□□□□ -0.43
SCN1B-202ENST00000415950 DGLUCYQ7Z3D6 616 aa12.36□□□□□ -0.43
SCN1B-202ENST00000415950 TSPYL5Q86VY4 417 aaPredicted RBP12.36□□□□□ -0.43
SCN1B-202ENST00000415950 CELF2-AS1Q8N7Q2 184 aa12.36□□□□□ -0.43
SCN1B-202ENST00000415950 GALNT6Q8NCL4 622 aa12.36□□□□□ -0.43
SCN1B-202ENST00000415950 OR13F1Q8NGS4 319 aa12.36□□□□□ -0.43
SCN1B-202ENST00000415950 OR2T11Q8NH01 316 aa12.36□□□□□ -0.43
SCN1B-202ENST00000415950 OR51A7Q8NH64 312 aa12.36□□□□□ -0.43
SCN1B-202ENST00000415950 RGMAQ96B86 450 aa12.36□□□□□ -0.43
SCN1B-202ENST00000415950 PLD4Q96BZ4 506 aa12.36□□□□□ -0.43
SCN1B-202ENST00000415950 IL17FQ96PD4 163 aa12.36□□□□□ -0.43
SCN1B-202ENST00000415950 ABCG5Q9H222 651 aa12.36□□□□□ -0.43
SCN1B-202ENST00000415950 B4GALT6Q9UBX8 382 aa12.36□□□□□ -0.43
SCN1B-202ENST00000415950 KCNK6Q9Y257 313 aa12.36□□□□□ -0.43
SCN1B-202ENST00000415950 N4BP2Q86UW6 1770 aaPredicted RBP12.36□□□□□ -0.43
SCN1B-202ENST00000415950 A0A1B0GTL3 188 aa12.36□□□□□ -0.43
SCN1B-202ENST00000415950 TEX46H3BTG2 121 aa12.36□□□□□ -0.43
SCN1B-202ENST00000415950 EIF1AYO14602 144 aaKnown RBP12.36□□□□□ -0.43
SCN1B-202ENST00000415950 NUPL2O15504 423 aaKnown RBP12.36□□□□□ -0.43
SCN1B-202ENST00000415950 CHP2O43745 196 aa12.36□□□□□ -0.43
SCN1B-202ENST00000415950 NFATC1O95644 943 aa12.36□□□□□ -0.43
SCN1B-202ENST00000415950 LDOC1O95751 146 aaPredicted RBP12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms