RNA–Protein interactions for RNA: ENST00000415886.2

CTHRC1-202, Transcript of collagen triple helix repeat containing 1, humanhuman

TSL 2 BASIC

Gene CTHRC1, Length 571 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1-202ENST00000415886 TRMT10CQ7L0Y3 403 aaKnown RBP12.29□□□□□ -0.44
CTHRC1-202ENST00000415886 CENPLQ8N0S6 344 aaPredicted RBP12.29□□□□□ -0.44
CTHRC1-202ENST00000415886 CLYBLQ8N0X4 340 aa12.29□□□□□ -0.44
CTHRC1-202ENST00000415886 ARMC10Q8N2F6 343 aa12.29□□□□□ -0.44
CTHRC1-202ENST00000415886 NINJ1Q92982 152 aa12.29□□□□□ -0.44
CTHRC1-202ENST00000415886 REPS1Q96D71 796 aa12.29□□□□□ -0.44
CTHRC1-202ENST00000415886 KCNC2Q96PR1 638 aa12.29□□□□□ -0.44
CTHRC1-202ENST00000415886 F2RL3Q96RI0 385 aa12.29□□□□□ -0.44
CTHRC1-202ENST00000415886 TBCDQ9BTW9 1192 aa12.29□□□□□ -0.44
CTHRC1-202ENST00000415886 NECTIN3Q9NQS3 549 aa12.29□□□□□ -0.44
CTHRC1-202ENST00000415886 PRTFDC1Q9NRG1 225 aa12.29□□□□□ -0.44
CTHRC1-202ENST00000415886 PNO1Q9NRX1 252 aaKnown RBP12.29□□□□□ -0.44
CTHRC1-202ENST00000415886 DEPPQ9NTK1 212 aa12.29□□□□□ -0.44
CTHRC1-202ENST00000415886 ZNF180Q9UJW8 692 aa12.29□□□□□ -0.44
CTHRC1-202ENST00000415886 MMACHCQ9Y4U1 282 aa12.29□□□□□ -0.44
CTHRC1-202ENST00000415886 PCDHGA11Q9Y5H2 935 aa12.29□□□□□ -0.44
CTHRC1-202ENST00000415886 PRRC2AP48634 2157 aaKnown RBP12.28□□□□□ -0.44
CTHRC1-202ENST00000415886 INTS1Q8N201 2190 aaKnown RBP12.28□□□□□ -0.44
CTHRC1-202ENST00000415886 IGKV3D-11A0A0A0MRZ8 115 aa12.28□□□□□ -0.44
CTHRC1-202ENST00000415886 TCRBV16S1A1N1A0A5B0 115 aa12.28□□□□□ -0.44
CTHRC1-202ENST00000415886 PINLYPA6NC86 204 aa12.28□□□□□ -0.44
CTHRC1-202ENST00000415886 TRIM49D1C9J1S8 452 aa12.28□□□□□ -0.44
CTHRC1-202ENST00000415886 NPIPA2E9PIF3 369 aa12.28□□□□□ -0.44
CTHRC1-202ENST00000415886 NPIPA3F8WFD2 350 aa12.28□□□□□ -0.44
CTHRC1-202ENST00000415886 SH3BGRLO75368 114 aa12.28□□□□□ -0.44
CTHRC1-202ENST00000415886 ITGA10O75578 1167 aa12.28□□□□□ -0.44
CTHRC1-202ENST00000415886 TGFB1P01137 390 aa12.28□□□□□ -0.44
CTHRC1-202ENST00000415886 IFNA16P05015 189 aa12.28□□□□□ -0.44
CTHRC1-202ENST00000415886 DRD2P14416 443 aa12.28□□□□□ -0.44
CTHRC1-202ENST00000415886 TNNI3P19429 210 aa12.28□□□□□ -0.44
CTHRC1-202ENST00000415886 HNRNPH1P31943 449 aaKnown RBP12.28□□□□□ -0.44
CTHRC1-202ENST00000415886 RAP1GDS1P52306 607 aa12.28□□□□□ -0.44
CTHRC1-202ENST00000415886 DLX5P56178 289 aa12.28□□□□□ -0.44
CTHRC1-202ENST00000415886 HSD17B7P56937 341 aa12.28□□□□□ -0.44
CTHRC1-202ENST00000415886 RAB38P57729 211 aa12.28□□□□□ -0.44
CTHRC1-202ENST00000415886 DDX39BQ13838 428 aaKnown RBP12.28□□□□□ -0.44
CTHRC1-202ENST00000415886 RUNX2Q13950 521 aa12.28□□□□□ -0.44
CTHRC1-202ENST00000415886 SETDB1Q15047 1291 aa12.28□□□□□ -0.44
CTHRC1-202ENST00000415886 TEX35Q5T0J7 233 aa12.28□□□□□ -0.44
CTHRC1-202ENST00000415886 LIPJQ5W064 366 aa12.28□□□□□ -0.44
CTHRC1-202ENST00000415886 ACAD11Q709F0 780 aa12.28□□□□□ -0.44
CTHRC1-202ENST00000415886 ZNF595Q8IYB9 648 aa12.28□□□□□ -0.44
CTHRC1-202ENST00000415886 TMEM156Q8N614 296 aa12.28□□□□□ -0.44
CTHRC1-202ENST00000415886 APCDD1LQ8NCL9 501 aa12.28□□□□□ -0.44
CTHRC1-202ENST00000415886 C7orf57Q8NEG2 295 aa12.28□□□□□ -0.44
CTHRC1-202ENST00000415886 OR5M9Q8NGP3 310 aa12.28□□□□□ -0.44
CTHRC1-202ENST00000415886 OR10Q1Q8NGQ4 319 aa12.28□□□□□ -0.44
CTHRC1-202ENST00000415886 CMTM7Q96FZ5 175 aa12.28□□□□□ -0.44
CTHRC1-202ENST00000415886 POLDIP3Q9BY77 421 aaKnown RBP12.28□□□□□ -0.44
CTHRC1-202ENST00000415886 IPPKQ9H8X2 491 aa12.28□□□□□ -0.44
CTHRC1-202ENST00000415886 PNPLA3Q9NST1 481 aa12.28□□□□□ -0.44
CTHRC1-202ENST00000415886 ZNF358Q9NW07 568 aa12.28□□□□□ -0.44
CTHRC1-202ENST00000415886 KCMF1Q9P0J7 381 aa12.28□□□□□ -0.44
CTHRC1-202ENST00000415886 ST6GALNAC2Q9UJ37 374 aa12.28□□□□□ -0.44
CTHRC1-202ENST00000415886 FBXW2Q9UKT8 454 aa12.28□□□□□ -0.44
CTHRC1-202ENST00000415886 L3MBTL1Q9Y468 752 aa12.28□□□□□ -0.44
CTHRC1-202ENST00000415886 SYNDIG1LA6NDD5 238 aa12.27□□□□□ -0.45
CTHRC1-202ENST00000415886 FAM166BA8MTA8 275 aa12.27□□□□□ -0.45
CTHRC1-202ENST00000415886 CTAG2O75638 210 aa12.27□□□□□ -0.45
CTHRC1-202ENST00000415886 CLDN9O95484 217 aa12.27□□□□□ -0.45
CTHRC1-202ENST00000415886 MTHFD2P13995 350 aa12.27□□□□□ -0.45
CTHRC1-202ENST00000415886 EPORP19235 508 aa12.27□□□□□ -0.45
CTHRC1-202ENST00000415886 PTX3P26022 381 aaPredicted RBP12.27□□□□□ -0.45
CTHRC1-202ENST00000415886 CLCN2P51788 898 aa12.27□□□□□ -0.45
CTHRC1-202ENST00000415886 STX4Q12846 297 aa12.27□□□□□ -0.45
CTHRC1-202ENST00000415886 SNTB1Q13884 538 aaKnown RBP12.27□□□□□ -0.45
CTHRC1-202ENST00000415886 GTF2H2Q13888 395 aa12.27□□□□□ -0.45
CTHRC1-202ENST00000415886 PCBP2Q15366 365 aaKnown RBP eCLIP12.27□□□□□ -0.45
CTHRC1-202ENST00000415886 ADPRMQ3LIE5 342 aa12.27□□□□□ -0.45
CTHRC1-202ENST00000415886 GXYLT1Q4G148 440 aa12.27□□□□□ -0.45
CTHRC1-202ENST00000415886 TTC19Q6DKK2 380 aaPredicted RBP12.27□□□□□ -0.45
CTHRC1-202ENST00000415886 GRHL2Q6ISB3 625 aa12.27□□□□□ -0.45
CTHRC1-202ENST00000415886 GTF2H2CQ6P1K8 395 aa12.27□□□□□ -0.45
CTHRC1-202ENST00000415886 METTL2BQ6P1Q9 378 aaKnown RBP12.27□□□□□ -0.45
CTHRC1-202ENST00000415886 LAS2Q8IYD9 372 aa12.27□□□□□ -0.45
CTHRC1-202ENST00000415886 ZZZ3Q8IYH5 903 aa12.27□□□□□ -0.45
CTHRC1-202ENST00000415886 PTGR2Q8N8N7 351 aaPredicted RBP12.27□□□□□ -0.45
CTHRC1-202ENST00000415886 B3GNT7Q8NFL0 401 aa12.27□□□□□ -0.45
CTHRC1-202ENST00000415886 OR7G3Q8NG95 312 aa12.27□□□□□ -0.45
CTHRC1-202ENST00000415886 UBTD2Q8WUN7 234 aa12.27□□□□□ -0.45
CTHRC1-202ENST00000415886 RGMAQ96B86 450 aa12.27□□□□□ -0.45
CTHRC1-202ENST00000415886 PHF21BQ96EK2 531 aa12.27□□□□□ -0.45
CTHRC1-202ENST00000415886 MRPL57Q9BQC6 102 aaKnown RBP12.27□□□□□ -0.45
CTHRC1-202ENST00000415886 GPATCH1Q9BRR8 931 aaKnown RBP12.27□□□□□ -0.45
CTHRC1-202ENST00000415886 SLC24A3Q9HC58 644 aa12.27□□□□□ -0.45
CTHRC1-202ENST00000415886 DLL4Q9NR61 685 aa12.27□□□□□ -0.45
CTHRC1-202ENST00000415886 ZNF223Q9UK11 482 aaPredicted RBP12.27□□□□□ -0.45
CTHRC1-202ENST00000415886 PLEKHA6Q9Y2H5 1048 aa12.27□□□□□ -0.45
CTHRC1-202ENST00000415886 LIPGQ9Y5X9 500 aa12.27□□□□□ -0.45
CTHRC1-202ENST00000415886 PHF3Q92576 2039 aaKnown RBP12.27□□□□□ -0.45
CTHRC1-202ENST00000415886 A0A0G2JMM0 328 aa12.26□□□□□ -0.45
CTHRC1-202ENST00000415886 A0A0G2JNJ9 132 aa12.26□□□□□ -0.45
CTHRC1-202ENST00000415886 IQANK1A0A1B0GTG1 560 aa12.26□□□□□ -0.45
CTHRC1-202ENST00000415886 A0A1B0GTL3 188 aa12.26□□□□□ -0.45
CTHRC1-202ENST00000415886 A0A1W2PPB8 328 aa12.26□□□□□ -0.45
CTHRC1-202ENST00000415886 A0A1W2PRS3 328 aa12.26□□□□□ -0.45
CTHRC1-202ENST00000415886 TMEM200CA6NKL6 621 aa12.26□□□□□ -0.45
CTHRC1-202ENST00000415886 KIR3DP1A8MWS1 328 aa12.26□□□□□ -0.45
CTHRC1-202ENST00000415886 SAP18O00422 153 aaKnown RBP12.26□□□□□ -0.45
CTHRC1-202ENST00000415886 PRKNO60260 465 aaPredicted RBP12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms