RNA–Protein interactions for RNA: ENST00000414802.5

CNOT4-204, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 1 (best) BASIC

Gene CNOT4, Length 1,687 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-204ENST00000414802 SLC13A2Q13183 592 aa12.32□□□□□ -0.44
CNOT4-204ENST00000414802 SRSF6Q13247 344 aaKnown RBP12.32□□□□□ -0.44
CNOT4-204ENST00000414802 PDE7AQ13946 482 aa12.32□□□□□ -0.44
CNOT4-204ENST00000414802 FAM174BQ3ZCQ3 159 aa12.32□□□□□ -0.44
CNOT4-204ENST00000414802 SPANXN4Q5MJ08 99 aa12.32□□□□□ -0.44
CNOT4-204ENST00000414802 LANCL3Q6ZV70 420 aa12.32□□□□□ -0.44
CNOT4-204ENST00000414802 DTX1Q86Y01 620 aa12.32□□□□□ -0.44
CNOT4-204ENST00000414802 FUNDC1Q8IVP5 155 aa12.32□□□□□ -0.44
CNOT4-204ENST00000414802 SCUBE1Q8IWY4 988 aa12.32□□□□□ -0.44
CNOT4-204ENST00000414802 ZNF595Q8IYB9 648 aa12.32□□□□□ -0.44
CNOT4-204ENST00000414802 IL22RA1Q8N6P7 574 aa12.32□□□□□ -0.44
CNOT4-204ENST00000414802 NKD1Q969G9 470 aa12.32□□□□□ -0.44
CNOT4-204ENST00000414802 ANKRD9Q96BM1 317 aaPredicted RBP12.32□□□□□ -0.44
CNOT4-204ENST00000414802 PPCDCQ96CD2 204 aa12.32□□□□□ -0.44
CNOT4-204ENST00000414802 NAF1Q96HR8 494 aaKnown RBP12.32□□□□□ -0.44
CNOT4-204ENST00000414802 ZNF578Q96N58 590 aaPredicted RBP12.32□□□□□ -0.44
CNOT4-204ENST00000414802 ZBTB18Q99592 522 aa12.32□□□□□ -0.44
CNOT4-204ENST00000414802 TGIF2Q9GZN2 237 aa12.32□□□□□ -0.44
CNOT4-204ENST00000414802 SLC26A1Q9H2B4 701 aa12.32□□□□□ -0.44
CNOT4-204ENST00000414802 CLMPQ9H6B4 373 aa12.32□□□□□ -0.44
CNOT4-204ENST00000414802 NECTIN3Q9NQS3 549 aa12.32□□□□□ -0.44
CNOT4-204ENST00000414802 ATP6V1HQ9UI12 483 aa12.32□□□□□ -0.44
CNOT4-204ENST00000414802 ACSL6Q9UKU0 697 aa12.32□□□□□ -0.44
CNOT4-204ENST00000414802 PTRH2Q9Y3E5 179 aaKnown RBP12.32□□□□□ -0.44
CNOT4-204ENST00000414802 CAPN7Q9Y6W3 813 aa12.32□□□□□ -0.44
CNOT4-204ENST00000414802 ANKRD11Q6UB99 2663 aaPredicted RBP12.32□□□□□ -0.44
CNOT4-204ENST00000414802 VSTM2BA6NLU5 285 aa12.32□□□□□ -0.44
CNOT4-204ENST00000414802 GABRR3A8MPY1 467 aa12.32□□□□□ -0.44
CNOT4-204ENST00000414802 IDSB3KWA1 339 aa12.32□□□□□ -0.44
CNOT4-204ENST00000414802 ALBP02768 609 aa12.32□□□□□ -0.44
CNOT4-204ENST00000414802 HEXBP07686 556 aa12.32□□□□□ -0.44
CNOT4-204ENST00000414802 LIPCP11150 499 aa12.32□□□□□ -0.44
CNOT4-204ENST00000414802 PRPS1L1P21108 318 aa12.32□□□□□ -0.44
CNOT4-204ENST00000414802 PPP2R1BP30154 601 aa12.32□□□□□ -0.44
CNOT4-204ENST00000414802 FEN1P39748 380 aaKnown RBP12.32□□□□□ -0.44
CNOT4-204ENST00000414802 MRPL19P49406 292 aaKnown RBP12.32□□□□□ -0.44
CNOT4-204ENST00000414802 KLF10Q13118 480 aa12.32□□□□□ -0.44
CNOT4-204ENST00000414802 MPEG1Q2M385 716 aa12.32□□□□□ -0.44
CNOT4-204ENST00000414802 TIGD2Q4W5G0 525 aa12.32□□□□□ -0.44
CNOT4-204ENST00000414802 OR4F3Q6IEY1 312 aa12.32□□□□□ -0.44
CNOT4-204ENST00000414802 TREML1Q86YW5 311 aa12.32□□□□□ -0.44
CNOT4-204ENST00000414802 FAM9CQ8IZT9 166 aa12.32□□□□□ -0.44
CNOT4-204ENST00000414802 CPSF7Q8N684 471 aaKnown RBP12.32□□□□□ -0.44
CNOT4-204ENST00000414802 DOK4Q8TEW6 326 aa12.32□□□□□ -0.44
CNOT4-204ENST00000414802 ERP27Q96DN0 273 aa12.32□□□□□ -0.44
CNOT4-204ENST00000414802 CNRIP1Q96F85 164 aaPredicted RBP12.32□□□□□ -0.44
CNOT4-204ENST00000414802 PTCHD1Q96NR3 888 aa12.32□□□□□ -0.44
CNOT4-204ENST00000414802 CRB3Q9BUF7 120 aa12.32□□□□□ -0.44
CNOT4-204ENST00000414802 MYLK2Q9H1R3 596 aa12.32□□□□□ -0.44
CNOT4-204ENST00000414802 SLAMF7Q9NQ25 335 aa12.32□□□□□ -0.44
CNOT4-204ENST00000414802 C3orf18Q9UK00 162 aa12.32□□□□□ -0.44
CNOT4-204ENST00000414802 CLDN16Q9Y5I7 305 aa12.32□□□□□ -0.44
CNOT4-204ENST00000414802 MED19A0JLT2 244 aaPredicted RBP12.31□□□□□ -0.44
CNOT4-204ENST00000414802 TERTO14746 1132 aaKnown RBP12.31□□□□□ -0.44
CNOT4-204ENST00000414802 PDPK1O15530 556 aa12.31□□□□□ -0.44
CNOT4-204ENST00000414802 TLX3O43711 291 aaPredicted RBP12.31□□□□□ -0.44
CNOT4-204ENST00000414802 PRMT3O60678 531 aa12.31□□□□□ -0.44
CNOT4-204ENST00000414802 CCDC22O60826 627 aa12.31□□□□□ -0.44
CNOT4-204ENST00000414802 DCTN3O75935 186 aa12.31□□□□□ -0.44
CNOT4-204ENST00000414802 RECKO95980 971 aa12.31□□□□□ -0.44
CNOT4-204ENST00000414802 UMODP07911 640 aa12.31□□□□□ -0.44
CNOT4-204ENST00000414802 POLR2JP52435 117 aaKnown RBP12.31□□□□□ -0.44
CNOT4-204ENST00000414802 C21orf58P58505 322 aa12.31□□□□□ -0.44
CNOT4-204ENST00000414802 PHC1P78364 1004 aa12.31□□□□□ -0.44
CNOT4-204ENST00000414802 CPTPQ5TA50 214 aa12.31□□□□□ -0.44
CNOT4-204ENST00000414802 QSOX2Q6ZRP7 698 aa12.31□□□□□ -0.44
CNOT4-204ENST00000414802 R3HCC1LQ7Z5L2 792 aaKnown RBP12.31□□□□□ -0.44
CNOT4-204ENST00000414802 ANKRD46Q86W74 232 aa12.31□□□□□ -0.44
CNOT4-204ENST00000414802 POU5F2Q8N7G0 328 aa12.31□□□□□ -0.44
CNOT4-204ENST00000414802 ANKS4BQ8N8V4 417 aa12.31□□□□□ -0.44
CNOT4-204ENST00000414802 OR4K14Q8NGD5 310 aa12.31□□□□□ -0.44
CNOT4-204ENST00000414802 VPS33AQ96AX1 596 aa12.31□□□□□ -0.44
CNOT4-204ENST00000414802 DUSP26Q9BV47 211 aa12.31□□□□□ -0.44
CNOT4-204ENST00000414802 CCDC106Q9BWC9 280 aa12.31□□□□□ -0.44
CNOT4-204ENST00000414802 WDR54Q9H977 334 aa12.31□□□□□ -0.44
CNOT4-204ENST00000414802 IL17BQ9UHF5 180 aa12.31□□□□□ -0.44
CNOT4-204ENST00000414802 ENTPD4Q9Y227 616 aa12.31□□□□□ -0.44
CNOT4-204ENST00000414802 WBP11Q9Y2W2 641 aaKnown RBP12.31□□□□□ -0.44
CNOT4-204ENST00000414802 MMACHCQ9Y4U1 282 aa12.31□□□□□ -0.44
CNOT4-204ENST00000414802 FAM234BA2RU67 622 aa12.3□□□□□ -0.44
CNOT4-204ENST00000414802 CLDN4O14493 209 aa12.3□□□□□ -0.44
CNOT4-204ENST00000414802 CTNSO60931 367 aa12.3□□□□□ -0.44
CNOT4-204ENST00000414802 KLF7O75840 302 aaPredicted RBP12.3□□□□□ -0.44
CNOT4-204ENST00000414802 GPR75O95800 540 aa12.3□□□□□ -0.44
CNOT4-204ENST00000414802 RAB40ALP0C0E4 278 aa12.3□□□□□ -0.44
CNOT4-204ENST00000414802 CAPN3P20807 821 aa12.3□□□□□ -0.44
CNOT4-204ENST00000414802 IL10P22301 178 aa12.3□□□□□ -0.44
CNOT4-204ENST00000414802 RPL3P39023 403 aaKnown RBP12.3□□□□□ -0.44
CNOT4-204ENST00000414802 FOLR3P41439 243 aa12.3□□□□□ -0.44
CNOT4-204ENST00000414802 EMP2P54851 167 aa12.3□□□□□ -0.44
CNOT4-204ENST00000414802 HSD17B7P56937 341 aa12.3□□□□□ -0.44
CNOT4-204ENST00000414802 PCBP4P57723 403 aaKnown RBP12.3□□□□□ -0.44
CNOT4-204ENST00000414802 PLIN5Q00G26 463 aa12.3□□□□□ -0.44
CNOT4-204ENST00000414802 STX4Q12846 297 aa12.3□□□□□ -0.44
CNOT4-204ENST00000414802 LTB4RQ15722 352 aa12.3□□□□□ -0.44
CNOT4-204ENST00000414802 TANKQ92844 425 aa12.3□□□□□ -0.44
CNOT4-204ENST00000414802 TESCQ96BS2 214 aa12.3□□□□□ -0.44
CNOT4-204ENST00000414802 MTERF3Q96E29 417 aa12.3□□□□□ -0.44
CNOT4-204ENST00000414802 SLC35C2Q9NQQ7 365 aa12.3□□□□□ -0.44
CNOT4-204ENST00000414802 PRDM9Q9NQV7 894 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms