RNA–Protein interactions for RNA: ENST00000411840.6

MRPL48-204, Transcript of mitochondrial ribosomal protein L48, humanhuman

TSL 1 (best) BASIC

Gene MRPL48, Length 1,197 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL48-204ENST00000411840 COPS7AQ9UBW8 275 aa8.4□□□□□ -1.06
MRPL48-204ENST00000411840 ST6GALNAC2Q9UJ37 374 aa8.4□□□□□ -1.06
MRPL48-204ENST00000411840 ATG4BQ9Y4P1 393 aa8.4□□□□□ -1.06
MRPL48-204ENST00000411840 SPACA6W5XKT8 324 aa8.4□□□□□ -1.06
MRPL48-204ENST00000411840 C2CD3Q4AC94 2353 aa8.39□□□□□ -1.07
MRPL48-204ENST00000411840 RTCAO00442 366 aaKnown RBP8.39□□□□□ -1.07
MRPL48-204ENST00000411840 RFPL3SP0C7P2 107 aa8.39□□□□□ -1.07
MRPL48-204ENST00000411840 CCDC166P0CW27 439 aa8.39□□□□□ -1.07
MRPL48-204ENST00000411840 COX7A2P14406 83 aa8.39□□□□□ -1.07
MRPL48-204ENST00000411840 GABRA1P14867 456 aa8.39□□□□□ -1.07
MRPL48-204ENST00000411840 HOXB4P17483 251 aaPredicted RBP8.39□□□□□ -1.07
MRPL48-204ENST00000411840 CD22P20273 847 aa8.39□□□□□ -1.07
MRPL48-204ENST00000411840 ENDOUP21128 410 aaKnown RBP8.39□□□□□ -1.07
MRPL48-204ENST00000411840 UQCRC1P31930 480 aa8.39□□□□□ -1.07
MRPL48-204ENST00000411840 STT3AP46977 705 aa8.39□□□□□ -1.07
MRPL48-204ENST00000411840 HSPA7P48741 367 aa8.39□□□□□ -1.07
MRPL48-204ENST00000411840 SLC12A2P55011 1212 aa8.39□□□□□ -1.07
MRPL48-204ENST00000411840 PPP2R2AP63151 447 aa8.39□□□□□ -1.07
MRPL48-204ENST00000411840 KCNJ2P63252 427 aa8.39□□□□□ -1.07
MRPL48-204ENST00000411840 DR1Q01658 176 aa8.39□□□□□ -1.07
MRPL48-204ENST00000411840 IRF8Q02556 426 aa8.39□□□□□ -1.07
MRPL48-204ENST00000411840 LAPTM5Q13571 262 aa8.39□□□□□ -1.07
MRPL48-204ENST00000411840 PDK4Q16654 411 aa8.39□□□□□ -1.07
MRPL48-204ENST00000411840 AP5B1Q2VPB7 878 aa8.39□□□□□ -1.07
MRPL48-204ENST00000411840 TMEM35AQ53FP2 167 aa8.39□□□□□ -1.07
MRPL48-204ENST00000411840 PAGE2BQ5JRK9 111 aa8.39□□□□□ -1.07
MRPL48-204ENST00000411840 CDKL4Q5MAI5 379 aa8.39□□□□□ -1.07
MRPL48-204ENST00000411840 RIPPLY2Q5TAB7 128 aa8.39□□□□□ -1.07
MRPL48-204ENST00000411840 SULT1C3Q6IMI6 304 aa8.39□□□□□ -1.07
MRPL48-204ENST00000411840 ZNF793Q6ZN11 406 aa8.39□□□□□ -1.07
MRPL48-204ENST00000411840 DGAT2L6Q6ZPD8 337 aa8.39□□□□□ -1.07
MRPL48-204ENST00000411840 SYDE1Q6ZW31 735 aaPredicted RBP8.39□□□□□ -1.07
MRPL48-204ENST00000411840 HOMEZQ8IX15 550 aa8.39□□□□□ -1.07
MRPL48-204ENST00000411840 FBXO36Q8NEA4 188 aa8.39□□□□□ -1.07
MRPL48-204ENST00000411840 SRFBP1Q8NEF9 429 aaKnown RBP8.39□□□□□ -1.07
MRPL48-204ENST00000411840 C7orf57Q8NEG2 295 aa8.39□□□□□ -1.07
MRPL48-204ENST00000411840 NUBPLQ8TB37 319 aa8.39□□□□□ -1.07
MRPL48-204ENST00000411840 ZNF473Q8WTR7 871 aaKnown RBP8.39□□□□□ -1.07
MRPL48-204ENST00000411840 RBM18Q96H35 190 aaKnown RBP8.39□□□□□ -1.07
MRPL48-204ENST00000411840 DERL2Q9GZP9 239 aa8.39□□□□□ -1.07
MRPL48-204ENST00000411840 CLEC4MQ9H2X3 399 aaPredicted RBP8.39□□□□□ -1.07
MRPL48-204ENST00000411840 RHOJQ9H4E5 214 aa8.39□□□□□ -1.07
MRPL48-204ENST00000411840 CAB39LQ9H9S4 337 aa8.39□□□□□ -1.07
MRPL48-204ENST00000411840 SH2D2AQ9NP31 389 aa8.39□□□□□ -1.07
MRPL48-204ENST00000411840 ZFP64Q9NPA5 681 aa8.39□□□□□ -1.07
MRPL48-204ENST00000411840 RASSF1Q9NS23 344 aa8.39□□□□□ -1.07
MRPL48-204ENST00000411840 WWOXQ9NZC7 414 aa8.39□□□□□ -1.07
MRPL48-204ENST00000411840 SPRR3Q9UBC9 169 aa8.39□□□□□ -1.07
MRPL48-204ENST00000411840 B4GALT7Q9UBV7 327 aa8.39□□□□□ -1.07
MRPL48-204ENST00000411840 MTO1Q9Y2Z2 717 aaKnown RBP8.39□□□□□ -1.07
MRPL48-204ENST00000411840 VPS13CQ709C8 3753 aa8.39□□□□□ -1.07
MRPL48-204ENST00000411840 HSPB2A8KAH6 182 aa8.38□□□□□ -1.07
MRPL48-204ENST00000411840 HRKO00198 91 aa8.38□□□□□ -1.07
MRPL48-204ENST00000411840 SAP18O00422 153 aaKnown RBP8.38□□□□□ -1.07
MRPL48-204ENST00000411840 TP73O15350 636 aa8.38□□□□□ -1.07
MRPL48-204ENST00000411840 PROM1O43490 865 aa8.38□□□□□ -1.07
MRPL48-204ENST00000411840 DYRK3O43781 588 aa8.38□□□□□ -1.07
MRPL48-204ENST00000411840 FGF17O60258 216 aa8.38□□□□□ -1.07
MRPL48-204ENST00000411840 CCNT2O60583 730 aaKnown RBP8.38□□□□□ -1.07
MRPL48-204ENST00000411840 SH3BGRLO75368 114 aa8.38□□□□□ -1.07
MRPL48-204ENST00000411840 PIAS1O75925 651 aa8.38□□□□□ -1.07
MRPL48-204ENST00000411840 WISP3O95389 354 aaPredicted RBP8.38□□□□□ -1.07
MRPL48-204ENST00000411840 TGFB1P01137 390 aa8.38□□□□□ -1.07
MRPL48-204ENST00000411840 IGKV3-11P04433 115 aa8.38□□□□□ -1.07
MRPL48-204ENST00000411840 CD1DP15813 335 aa8.38□□□□□ -1.07
MRPL48-204ENST00000411840 EPORP19235 508 aa8.38□□□□□ -1.07
MRPL48-204ENST00000411840 HIST1H1TP22492 207 aaPredicted RBP8.38□□□□□ -1.07
MRPL48-204ENST00000411840 CPN2P22792 545 aa8.38□□□□□ -1.07
MRPL48-204ENST00000411840 DNASE1P24855 282 aa8.38□□□□□ -1.07
MRPL48-204ENST00000411840 CASP2P42575 452 aa8.38□□□□□ -1.07
MRPL48-204ENST00000411840 MSH2P43246 934 aa8.38□□□□□ -1.07
MRPL48-204ENST00000411840 IGLV3-21P80748 117 aaPredicted RBP8.38□□□□□ -1.07
MRPL48-204ENST00000411840 POU4F1Q01851 419 aa8.38□□□□□ -1.07
MRPL48-204ENST00000411840 TBL3Q12788 808 aaKnown RBP8.38□□□□□ -1.07
MRPL48-204ENST00000411840 ILF2Q12905 390 aaKnown RBP8.38□□□□□ -1.07
MRPL48-204ENST00000411840 PDIA2Q13087 525 aaKnown RBP8.38□□□□□ -1.07
MRPL48-204ENST00000411840 CHIT1Q13231 466 aa8.38□□□□□ -1.07
MRPL48-204ENST00000411840 SLAMF1Q13291 335 aa8.38□□□□□ -1.07
MRPL48-204ENST00000411840 BIKQ13323 160 aa8.38□□□□□ -1.07
MRPL48-204ENST00000411840 FASTKD3Q14CZ7 662 aaKnown RBP8.38□□□□□ -1.07
MRPL48-204ENST00000411840 OR4D1Q15615 310 aa8.38□□□□□ -1.07
MRPL48-204ENST00000411840 CEBPEQ15744 281 aa8.38□□□□□ -1.07
MRPL48-204ENST00000411840 TBCCQ15814 346 aa8.38□□□□□ -1.07
MRPL48-204ENST00000411840 HSPB2Q16082 182 aa8.38□□□□□ -1.07
MRPL48-204ENST00000411840 PRAMEF20Q5VT98 475 aa8.38□□□□□ -1.07
MRPL48-204ENST00000411840 SEM1Q6ZVN7 128 aa8.38□□□□□ -1.07
MRPL48-204ENST00000411840 CHSY3Q70JA7 882 aa8.38□□□□□ -1.07
MRPL48-204ENST00000411840 CDC20BQ86Y33 519 aa8.38□□□□□ -1.07
MRPL48-204ENST00000411840 C9orf40Q8IXQ3 194 aa8.38□□□□□ -1.07
MRPL48-204ENST00000411840 KLHL7Q8IXQ5 586 aa8.38□□□□□ -1.07
MRPL48-204ENST00000411840 ULK2Q8IYT8 1036 aa8.38□□□□□ -1.07
MRPL48-204ENST00000411840 LRRC25Q8N386 305 aaPredicted RBP8.38□□□□□ -1.07
MRPL48-204ENST00000411840 FBXW8Q8N3Y1 598 aa8.38□□□□□ -1.07
MRPL48-204ENST00000411840 SLC15A4Q8N697 577 aa8.38□□□□□ -1.07
MRPL48-204ENST00000411840 SLC22A8Q8TCC7 542 aa8.38□□□□□ -1.07
MRPL48-204ENST00000411840 PAQR8Q8TEZ7 354 aa8.38□□□□□ -1.07
MRPL48-204ENST00000411840 TANKQ92844 425 aa8.38□□□□□ -1.07
MRPL48-204ENST00000411840 DGAT2Q96PD7 388 aa8.38□□□□□ -1.07
MRPL48-204ENST00000411840 KRT12Q99456 494 aa8.38□□□□□ -1.07
MRPL48-204ENST00000411840 GPATCH1Q9BRR8 931 aaKnown RBP8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms