RNA–Protein interactions for RNA: ENST00000411464.3

MRPL55-220, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 3

Gene MRPL55, Length 767 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-220ENST00000411464 SPRR3Q9UBC9 169 aa15.41■□□□□ 0.06
MRPL55-220ENST00000411464 PLEKHA6Q9Y2H5 1048 aa15.41■□□□□ 0.06
MRPL55-220ENST00000411464 HCFC1P51610 2035 aa15.41■□□□□ 0.06
MRPL55-220ENST00000411464 TAPBPO15533 448 aa15.4■□□□□ 0.06
MRPL55-220ENST00000411464 RFPL3SP0C7P2 107 aa15.4■□□□□ 0.06
MRPL55-220ENST00000411464 ENDOUP21128 410 aaKnown RBP15.4■□□□□ 0.06
MRPL55-220ENST00000411464 CPN2P22792 545 aa15.4■□□□□ 0.06
MRPL55-220ENST00000411464 IVDP26440 423 aa15.4■□□□□ 0.06
MRPL55-220ENST00000411464 HSPA7P48741 367 aa15.4■□□□□ 0.06
MRPL55-220ENST00000411464 IRF8Q02556 426 aa15.4■□□□□ 0.06
MRPL55-220ENST00000411464 ILF2Q12905 390 aaKnown RBP15.4■□□□□ 0.06
MRPL55-220ENST00000411464 FOXD4Q12950 439 aaPredicted RBP15.4■□□□□ 0.06
MRPL55-220ENST00000411464 TMEM35AQ53FP2 167 aa15.4■□□□□ 0.06
MRPL55-220ENST00000411464 FBXO48Q5FWF7 155 aa15.4■□□□□ 0.06
MRPL55-220ENST00000411464 SULT1C3Q6IMI6 304 aa15.4■□□□□ 0.06
MRPL55-220ENST00000411464 ZNF793Q6ZN11 406 aa15.4■□□□□ 0.06
MRPL55-220ENST00000411464 CHSY3Q70JA7 882 aa15.4■□□□□ 0.06
MRPL55-220ENST00000411464 UBE3DQ7Z6J8 389 aa15.4■□□□□ 0.06
MRPL55-220ENST00000411464 CDC20BQ86Y33 519 aa15.4■□□□□ 0.06
MRPL55-220ENST00000411464 ANKMY2Q8IV38 441 aa15.4■□□□□ 0.06
MRPL55-220ENST00000411464 ULK2Q8IYT8 1036 aa15.4■□□□□ 0.06
MRPL55-220ENST00000411464 SPATA6LQ8N4H0 392 aa15.4■□□□□ 0.06
MRPL55-220ENST00000411464 NEIL3Q8TAT5 605 aa15.4■□□□□ 0.06
MRPL55-220ENST00000411464 PAQR8Q8TEZ7 354 aa15.4■□□□□ 0.06
MRPL55-220ENST00000411464 FAM222BQ8WU58 562 aa15.4■□□□□ 0.06
MRPL55-220ENST00000411464 ESAMQ96AP7 390 aa15.4■□□□□ 0.06
MRPL55-220ENST00000411464 SPACA9Q96E40 222 aaPredicted RBP15.4■□□□□ 0.06
MRPL55-220ENST00000411464 WDR34Q96EX3 536 aa15.4■□□□□ 0.06
MRPL55-220ENST00000411464 JSRP1Q96MG2 331 aaPredicted RBP15.4■□□□□ 0.06
MRPL55-220ENST00000411464 ALPK1Q96QP1 1244 aa15.4■□□□□ 0.06
MRPL55-220ENST00000411464 WDR83Q9BRX9 315 aaKnown RBP15.4■□□□□ 0.06
MRPL55-220ENST00000411464 TMEM79Q9BSE2 394 aa15.4■□□□□ 0.06
MRPL55-220ENST00000411464 ZNF703Q9H7S9 590 aaPredicted RBP15.4■□□□□ 0.06
MRPL55-220ENST00000411464 ACKR4Q9NPB9 350 aa15.4■□□□□ 0.06
MRPL55-220ENST00000411464 SDAD1Q9NVU7 687 aaKnown RBP eCLIP15.4■□□□□ 0.06
MRPL55-220ENST00000411464 QPCTLQ9NXS2 382 aa15.4■□□□□ 0.06
MRPL55-220ENST00000411464 NSMCE4AQ9NXX6 385 aa15.4■□□□□ 0.06
MRPL55-220ENST00000411464 CNIH4Q9P003 139 aa15.4■□□□□ 0.06
MRPL55-220ENST00000411464 PRRC2AP48634 2157 aaKnown RBP15.4■□□□□ 0.06
MRPL55-220ENST00000411464 A6NNC1 897 aa15.39■□□□□ 0.05
MRPL55-220ENST00000411464 RTCAO00442 366 aaKnown RBP15.39■□□□□ 0.05
MRPL55-220ENST00000411464 PRAMEF4O60810 478 aa15.39■□□□□ 0.05
MRPL55-220ENST00000411464 FOSL1P15407 271 aa15.39■□□□□ 0.05
MRPL55-220ENST00000411464 BMP5P22003 454 aa15.39■□□□□ 0.05
MRPL55-220ENST00000411464 HIST1H1TP22492 207 aaPredicted RBP15.39■□□□□ 0.05
MRPL55-220ENST00000411464 MSH2P43246 934 aa15.39■□□□□ 0.05
MRPL55-220ENST00000411464 STT3AP46977 705 aa15.39■□□□□ 0.05
MRPL55-220ENST00000411464 CHIT1Q13231 466 aa15.39■□□□□ 0.05
MRPL55-220ENST00000411464 BIKQ13323 160 aa15.39■□□□□ 0.05
MRPL55-220ENST00000411464 FLYWCH1Q4VC44 716 aa15.39■□□□□ 0.05
MRPL55-220ENST00000411464 CDKL4Q5MAI5 379 aa15.39■□□□□ 0.05
MRPL55-220ENST00000411464 PRAMEF20Q5VT98 475 aa15.39■□□□□ 0.05
MRPL55-220ENST00000411464 PRAMEF9Q5VWM5 478 aa15.39■□□□□ 0.05
MRPL55-220ENST00000411464 FBXW10Q5XX13 1052 aa15.39■□□□□ 0.05
MRPL55-220ENST00000411464 CAMKMTQ7Z624 323 aa15.39■□□□□ 0.05
MRPL55-220ENST00000411464 OR4N5Q8IXE1 308 aa15.39■□□□□ 0.05
MRPL55-220ENST00000411464 C9orf40Q8IXQ3 194 aa15.39■□□□□ 0.05
MRPL55-220ENST00000411464 DND1Q8IYX4 353 aaKnown RBP15.39■□□□□ 0.05
MRPL55-220ENST00000411464 MMP21Q8N119 569 aa15.39■□□□□ 0.05
MRPL55-220ENST00000411464 LRRC25Q8N386 305 aaPredicted RBP15.39■□□□□ 0.05
MRPL55-220ENST00000411464 FAM13CQ8NE31 585 aa15.39■□□□□ 0.05
MRPL55-220ENST00000411464 PPWD1Q96BP3 646 aaKnown RBP15.39■□□□□ 0.05
MRPL55-220ENST00000411464 ART5Q96L15 291 aa15.39■□□□□ 0.05
MRPL55-220ENST00000411464 PHACTR1Q9C0D0 580 aa15.39■□□□□ 0.05
MRPL55-220ENST00000411464 SLC6A15Q9H2J7 730 aa15.39■□□□□ 0.05
MRPL55-220ENST00000411464 RHOJQ9H4E5 214 aa15.39■□□□□ 0.05
MRPL55-220ENST00000411464 SH2D2AQ9NP31 389 aa15.39■□□□□ 0.05
MRPL55-220ENST00000411464 MOCS1Q9NZB8 636 aa15.39■□□□□ 0.05
MRPL55-220ENST00000411464 CD274Q9NZQ7 290 aa15.39■□□□□ 0.05
MRPL55-220ENST00000411464 ZNF407Q9C0G0 2248 aa15.39■□□□□ 0.05
MRPL55-220ENST00000411464 IQANK1A0A1B0GTG1 560 aa15.38■□□□□ 0.05
MRPL55-220ENST00000411464 AHRRA9YTQ3 701 aa15.38■□□□□ 0.05
MRPL55-220ENST00000411464 CES2O00748 559 aa15.38■□□□□ 0.05
MRPL55-220ENST00000411464 FGF17O60258 216 aa15.38■□□□□ 0.05
MRPL55-220ENST00000411464 CCNT2O60583 730 aaKnown RBP15.38■□□□□ 0.05
MRPL55-220ENST00000411464 IGKV3-11P04433 115 aa15.38■□□□□ 0.05
MRPL55-220ENST00000411464 CCDC166P0CW27 439 aa15.38■□□□□ 0.05
MRPL55-220ENST00000411464 DRD2P14416 443 aa15.38■□□□□ 0.05
MRPL55-220ENST00000411464 CD22P20273 847 aa15.38■□□□□ 0.05
MRPL55-220ENST00000411464 SERPINB3P29508 390 aa15.38■□□□□ 0.05
MRPL55-220ENST00000411464 SSR2P43308 183 aa15.38■□□□□ 0.05
MRPL55-220ENST00000411464 TRPC1P48995 793 aa15.38■□□□□ 0.05
MRPL55-220ENST00000411464 ASCL1P50553 236 aa15.38■□□□□ 0.05
MRPL55-220ENST00000411464 PLIN5Q00G26 463 aa15.38■□□□□ 0.05
MRPL55-220ENST00000411464 POU4F1Q01851 419 aa15.38■□□□□ 0.05
MRPL55-220ENST00000411464 SLAMF1Q13291 335 aa15.38■□□□□ 0.05
MRPL55-220ENST00000411464 TBCCQ15814 346 aa15.38■□□□□ 0.05
MRPL55-220ENST00000411464 ADGRD1Q6QNK2 874 aa15.38■□□□□ 0.05
MRPL55-220ENST00000411464 SYDE1Q6ZW31 735 aaPredicted RBP15.38■□□□□ 0.05
MRPL55-220ENST00000411464 FBXO36Q8NEA4 188 aa15.38■□□□□ 0.05
MRPL55-220ENST00000411464 ZNF473Q8WTR7 871 aaKnown RBP15.38■□□□□ 0.05
MRPL55-220ENST00000411464 RNASE6Q93091 150 aaKnown RBP15.38■□□□□ 0.05
MRPL55-220ENST00000411464 UBE2E3Q969T4 207 aa15.38■□□□□ 0.05
MRPL55-220ENST00000411464 TSPAN17Q96FV3 270 aa15.38■□□□□ 0.05
MRPL55-220ENST00000411464 MS4A8Q9BY19 250 aa15.38■□□□□ 0.05
MRPL55-220ENST00000411464 GSX1Q9H4S2 264 aaPredicted RBP15.38■□□□□ 0.05
MRPL55-220ENST00000411464 RYDENQ9NUL5 291 aaKnown RBP15.38■□□□□ 0.05
MRPL55-220ENST00000411464 MS4A12Q9NXJ0 267 aa15.38■□□□□ 0.05
MRPL55-220ENST00000411464 MTRF1LQ9UGC7 380 aaKnown RBP15.38■□□□□ 0.05
MRPL55-220ENST00000411464 SNX12Q9UMY4 172 aa15.38■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms