RNA–Protein interactions for RNA: ENST00000409783.6

PTCD3-203, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 5

Gene PTCD3, Length 587 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-203ENST00000409783 MMP21Q8N119 569 aa20.91■□□□□ 0.94
PTCD3-203ENST00000409783 AGR3Q8TD06 166 aa20.91■□□□□ 0.94
PTCD3-203ENST00000409783 MGARPQ8TDB4 240 aa20.91■□□□□ 0.94
PTCD3-203ENST00000409783 BRIX1Q8TDN6 353 aaKnown RBP20.91■□□□□ 0.94
PTCD3-203ENST00000409783 ELP5Q8TE02 316 aa20.91■□□□□ 0.94
PTCD3-203ENST00000409783 TWIST2Q8WVJ9 160 aa20.91■□□□□ 0.94
PTCD3-203ENST00000409783 PAIP2Q9BPZ3 127 aaKnown RBP20.91■□□□□ 0.94
PTCD3-203ENST00000409783 ADAP2Q9NPF8 381 aa20.91■□□□□ 0.94
PTCD3-203ENST00000409783 PNO1Q9NRX1 252 aaKnown RBP20.91■□□□□ 0.94
PTCD3-203ENST00000409783 C5AR2Q9P296 337 aa20.91■□□□□ 0.94
PTCD3-203ENST00000409783 CES1P1Q9UKY3 287 aa20.91■□□□□ 0.94
PTCD3-203ENST00000409783 ZNF451Q9Y4E5 1061 aa20.91■□□□□ 0.94
PTCD3-203ENST00000409783 PCDHA9Q9Y5H5 950 aa20.91■□□□□ 0.94
PTCD3-203ENST00000409783 CFAP46Q8IYW2 2715 aa20.91■□□□□ 0.94
PTCD3-203ENST00000409783 SLC28A1O00337 649 aa20.9■□□□□ 0.94
PTCD3-203ENST00000409783 PCDH7O60245 1069 aa20.9■□□□□ 0.94
PTCD3-203ENST00000409783 BST1Q10588 318 aa20.9■□□□□ 0.94
PTCD3-203ENST00000409783 ELAVL1Q15717 326 aaKnown RBP20.9■□□□□ 0.94
PTCD3-203ENST00000409783 IMPG1Q17R60 797 aa20.9■□□□□ 0.94
PTCD3-203ENST00000409783 SPDYAQ5MJ70 313 aa20.9■□□□□ 0.94
PTCD3-203ENST00000409783 OR52E8Q6IFG1 317 aa20.9■□□□□ 0.94
PTCD3-203ENST00000409783 JMJD6Q6NYC1 403 aaPredicted RBP20.9■□□□□ 0.94
PTCD3-203ENST00000409783 IGFL2Q6UWQ7 119 aa20.9■□□□□ 0.94
PTCD3-203ENST00000409783 HOMEZQ8IX15 550 aa20.9■□□□□ 0.94
PTCD3-203ENST00000409783 APCDD1LQ8NCL9 501 aa20.9■□□□□ 0.94
PTCD3-203ENST00000409783 PTPMT1Q8WUK0 201 aaPredicted RBP20.9■□□□□ 0.94
PTCD3-203ENST00000409783 WDR41Q9HAD4 459 aa20.9■□□□□ 0.94
PTCD3-203ENST00000409783 NKIRAS1Q9NYS0 192 aa20.9■□□□□ 0.94
PTCD3-203ENST00000409783 HAO1Q9UJM8 370 aa20.9■□□□□ 0.94
PTCD3-203ENST00000409783 G3BP2Q9UN86 482 aaKnown RBP20.9■□□□□ 0.94
PTCD3-203ENST00000409783 SPTA1P02549 2419 aa20.89■□□□□ 0.94
PTCD3-203ENST00000409783 A0A1W2PS29 197 aa20.89■□□□□ 0.93
PTCD3-203ENST00000409783 PIP5K1BO14986 540 aa20.89■□□□□ 0.93
PTCD3-203ENST00000409783 KLHL41O60662 606 aa20.89■□□□□ 0.93
PTCD3-203ENST00000409783 MYO1DO94832 1006 aa20.89■□□□□ 0.93
PTCD3-203ENST00000409783 HSPA4LO95757 839 aa20.89■□□□□ 0.93
PTCD3-203ENST00000409783 GPR75O95800 540 aa20.89■□□□□ 0.93
PTCD3-203ENST00000409783 CHEK2O96017 543 aa20.89■□□□□ 0.93
PTCD3-203ENST00000409783 LINC00032P0C843 101 aa20.89■□□□□ 0.93
PTCD3-203ENST00000409783 SLC1A6P48664 564 aa20.89■□□□□ 0.93
PTCD3-203ENST00000409783 STX3Q13277 289 aa20.89■□□□□ 0.93
PTCD3-203ENST00000409783 XKR7Q5GH72 579 aa20.89■□□□□ 0.93
PTCD3-203ENST00000409783 AGAP7PQ5VUJ5 663 aa20.89■□□□□ 0.93
PTCD3-203ENST00000409783 IGFL3Q6UXB1 125 aa20.89■□□□□ 0.93
PTCD3-203ENST00000409783 ZNF843Q8N446 348 aa20.89■□□□□ 0.93
PTCD3-203ENST00000409783 SIRT6Q8N6T7 355 aa20.89■□□□□ 0.93
PTCD3-203ENST00000409783 ZNF781Q8N8C0 355 aa20.89■□□□□ 0.93
PTCD3-203ENST00000409783 B3GNT7Q8NFL0 401 aa20.89■□□□□ 0.93
PTCD3-203ENST00000409783 PUM2Q8TB72 1066 aaKnown RBP eCLIP20.89■□□□□ 0.93
PTCD3-203ENST00000409783 METTL2AQ96IZ6 378 aaKnown RBP20.89■□□□□ 0.93
PTCD3-203ENST00000409783 FCRL1Q96LA6 429 aa20.89■□□□□ 0.93
PTCD3-203ENST00000409783 AGAP4Q96P64 663 aa20.89■□□□□ 0.93
PTCD3-203ENST00000409783 HEY2Q9UBP5 337 aa20.89■□□□□ 0.93
PTCD3-203ENST00000409783 ZNF223Q9UK11 482 aaPredicted RBP20.89■□□□□ 0.93
PTCD3-203ENST00000409783 EPB41L3Q9Y2J2 1087 aaPredicted RBP20.89■□□□□ 0.93
PTCD3-203ENST00000409783 CNTRLQ7Z7A1 2325 aa20.88■□□□□ 0.93
PTCD3-203ENST00000409783 UQCRHLA0A096LP55 91 aa20.88■□□□□ 0.93
PTCD3-203ENST00000409783 GUCY1B2O75343 617 aa20.88■□□□□ 0.93
PTCD3-203ENST00000409783 UQCRHP07919 91 aa20.88■□□□□ 0.93
PTCD3-203ENST00000409783 NEFHP12036 1026 aa20.88■□□□□ 0.93
PTCD3-203ENST00000409783 STT3AP46977 705 aa20.88■□□□□ 0.93
PTCD3-203ENST00000409783 CD97P48960 835 aa20.88■□□□□ 0.93
PTCD3-203ENST00000409783 AP2B1P63010 937 aa20.88■□□□□ 0.93
PTCD3-203ENST00000409783 NFATC3Q12968 1075 aa20.88■□□□□ 0.93
PTCD3-203ENST00000409783 BIKQ13323 160 aa20.88■□□□□ 0.93
PTCD3-203ENST00000409783 CRB2Q5IJ48 1285 aa20.88■□□□□ 0.93
PTCD3-203ENST00000409783 IRAK1BP1Q5VVH5 260 aa20.88■□□□□ 0.93
PTCD3-203ENST00000409783 B3GNTL1Q67FW5 361 aaPredicted RBP20.88■□□□□ 0.93
PTCD3-203ENST00000409783 SLC48A1Q6P1K1 146 aa20.88■□□□□ 0.93
PTCD3-203ENST00000409783 DGAT2L6Q6ZPD8 337 aa20.88■□□□□ 0.93
PTCD3-203ENST00000409783 KIF2BQ8N4N8 673 aa20.88■□□□□ 0.93
PTCD3-203ENST00000409783 C7orf57Q8NEG2 295 aa20.88■□□□□ 0.93
PTCD3-203ENST00000409783 FAM76AQ8TAV0 307 aa20.88■□□□□ 0.93
PTCD3-203ENST00000409783 C16orf78Q8WTQ4 265 aa20.88■□□□□ 0.93
PTCD3-203ENST00000409783 C3orf30Q96M34 536 aa20.88■□□□□ 0.93
PTCD3-203ENST00000409783 NPAS2Q99743 824 aa20.88■□□□□ 0.93
PTCD3-203ENST00000409783 EBPLQ9BY08 206 aa20.88■□□□□ 0.93
PTCD3-203ENST00000409783 C1orf109Q9NX04 203 aa20.88■□□□□ 0.93
PTCD3-203ENST00000409783 PTGFRNQ9P2B2 879 aa20.88■□□□□ 0.93
PTCD3-203ENST00000409783 DLGAP4Q9Y2H0 992 aa20.88■□□□□ 0.93
PTCD3-203ENST00000409783 RAP2CQ9Y3L5 183 aa20.88■□□□□ 0.93
PTCD3-203ENST00000409783 CROCCQ5TZA2 2017 aa20.88■□□□□ 0.93
PTCD3-203ENST00000409783 C1orf226A1L170 272 aa20.87■□□□□ 0.93
PTCD3-203ENST00000409783 HMGB1P1B2RPK0 211 aaPredicted RBP20.87■□□□□ 0.93
PTCD3-203ENST00000409783 LSM1O15116 133 aaKnown RBP20.87■□□□□ 0.93
PTCD3-203ENST00000409783 RGS14O43566 566 aa20.87■□□□□ 0.93
PTCD3-203ENST00000409783 SNUPNO95149 360 aaKnown RBP20.87■□□□□ 0.93
PTCD3-203ENST00000409783 IFNA16P05015 189 aa20.87■□□□□ 0.93
PTCD3-203ENST00000409783 ALPPP05187 535 aa20.87■□□□□ 0.93
PTCD3-203ENST00000409783 IL3P08700 152 aa20.87■□□□□ 0.93
PTCD3-203ENST00000409783 ANXA4P09525 319 aaPredicted RBP20.87■□□□□ 0.93
PTCD3-203ENST00000409783 TAS2R50P59544 299 aa20.87■□□□□ 0.93
PTCD3-203ENST00000409783 NOXRED1Q6NXP6 359 aa20.87■□□□□ 0.93
PTCD3-203ENST00000409783 ISLR2Q6UXK2 745 aa20.87■□□□□ 0.93
PTCD3-203ENST00000409783 PTRH1Q86Y79 214 aaKnown RBP20.87■□□□□ 0.93
PTCD3-203ENST00000409783 HPS6Q86YV9 775 aa20.87■□□□□ 0.93
PTCD3-203ENST00000409783 TMEM132CQ8N3T6 1108 aa20.87■□□□□ 0.93
PTCD3-203ENST00000409783 RBMXL3Q8N7X1 1067 aaKnown RBP20.87■□□□□ 0.93
PTCD3-203ENST00000409783 LRTM1Q9HBL6 345 aa20.87■□□□□ 0.93
PTCD3-203ENST00000409783 POLR3HQ9Y535 204 aaPredicted RBP20.87■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms