RNA–Protein interactions for RNA: ENST00000409672.5

SCN9A-203, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

APPRIS P2 TSL 5 BASIC

Gene SCN9A, Length 9,768 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-203ENST00000409672 SMSP52788 366 aa8.08□□□□□ -1.12
SCN9A-203ENST00000409672 GNB2P62879 340 aa8.08□□□□□ -1.12
SCN9A-203ENST00000409672 CRYZQ08257 329 aaKnown RBP8.08□□□□□ -1.12
SCN9A-203ENST00000409672 WSCD2Q2TBF2 565 aa8.08□□□□□ -1.12
SCN9A-203ENST00000409672 OR51G2Q8NGK0 314 aa8.08□□□□□ -1.12
SCN9A-203ENST00000409672 TMEM234Q8WY98 164 aa8.08□□□□□ -1.12
SCN9A-203ENST00000409672 ZNF516Q92618 1163 aa8.08□□□□□ -1.12
SCN9A-203ENST00000409672 PTERQ96BW5 349 aa8.08□□□□□ -1.12
SCN9A-203ENST00000409672 IGSF21Q96ID5 467 aa8.08□□□□□ -1.12
SCN9A-203ENST00000409672 LINC00597Q9H2U6 94 aa8.08□□□□□ -1.12
SCN9A-203ENST00000409672 MTG2Q9H4K7 406 aa8.08□□□□□ -1.12
SCN9A-203ENST00000409672 C15orf41Q9Y2V0 281 aa8.08□□□□□ -1.12
SCN9A-203ENST00000409672 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP8.07□□□□□ -1.12
SCN9A-203ENST00000409672 TVP23AA6NH52 213 aa8.07□□□□□ -1.12
SCN9A-203ENST00000409672 RAB36O95755 333 aa8.07□□□□□ -1.12
SCN9A-203ENST00000409672 CD3GP09693 182 aa8.07□□□□□ -1.12
SCN9A-203ENST00000409672 CKMT1AP12532 417 aa8.07□□□□□ -1.12
SCN9A-203ENST00000409672 RFC2P35250 354 aa8.07□□□□□ -1.12
SCN9A-203ENST00000409672 CASP7P55210 303 aa8.07□□□□□ -1.12
SCN9A-203ENST00000409672 PSPHP78330 225 aa8.07□□□□□ -1.12
SCN9A-203ENST00000409672 DPYSL2Q16555 572 aa8.07□□□□□ -1.12
SCN9A-203ENST00000409672 RBM20Q5T481 1227 aaKnown RBP8.07□□□□□ -1.12
SCN9A-203ENST00000409672 KDELC1Q6UW63 502 aa8.07□□□□□ -1.12
SCN9A-203ENST00000409672 PHB2Q99623 299 aa8.07□□□□□ -1.12
SCN9A-203ENST00000409672 DPH7Q9BTV6 452 aa8.07□□□□□ -1.12
SCN9A-203ENST00000409672 TRBV11-1A0A0K0K1C0 115 aa8.07□□□□□ -1.12
SCN9A-203ENST00000409672 KLRC4O43908 158 aa8.07□□□□□ -1.12
SCN9A-203ENST00000409672 DBHP09172 617 aa8.07□□□□□ -1.12
SCN9A-203ENST00000409672 CEBPBP17676 345 aa8.07□□□□□ -1.12
SCN9A-203ENST00000409672 SHMT2P34897 504 aa8.07□□□□□ -1.12
SCN9A-203ENST00000409672 HES1Q14469 280 aa8.07□□□□□ -1.12
SCN9A-203ENST00000409672 RFTN1Q14699 578 aaPredicted RBP8.07□□□□□ -1.12
SCN9A-203ENST00000409672 DHCR24Q15392 516 aa8.07□□□□□ -1.12
SCN9A-203ENST00000409672 ZNF461Q8TAF7 563 aa8.07□□□□□ -1.12
SCN9A-203ENST00000409672 SFXN2Q96NB2 322 aa8.07□□□□□ -1.12
SCN9A-203ENST00000409672 PCDH10Q9P2E7 1040 aa8.07□□□□□ -1.12
SCN9A-203ENST00000409672 GIMAP2Q9UG22 337 aa8.07□□□□□ -1.12
SCN9A-203ENST00000409672 CARD8Q9Y2G2 431 aa8.07□□□□□ -1.12
SCN9A-203ENST00000409672 KCPQ6ZWJ8 1503 aa8.07□□□□□ -1.12
SCN9A-203ENST00000409672 CDRT1O95170 752 aa8.07□□□□□ -1.12
SCN9A-203ENST00000409672 PRPS2P11908 318 aa8.07□□□□□ -1.12
SCN9A-203ENST00000409672 TIMP2P16035 220 aa8.07□□□□□ -1.12
SCN9A-203ENST00000409672 AMY2BP19961 511 aa8.07□□□□□ -1.12
SCN9A-203ENST00000409672 RORAP35398 523 aa8.07□□□□□ -1.12
SCN9A-203ENST00000409672 HERVK_113P63132 956 aa8.07□□□□□ -1.12
SCN9A-203ENST00000409672 STEAP3Q658P3 488 aa8.07□□□□□ -1.12
SCN9A-203ENST00000409672 DCUN1D3Q8IWE4 304 aa8.07□□□□□ -1.12
SCN9A-203ENST00000409672 LINC00471Q8N535 108 aa8.07□□□□□ -1.12
SCN9A-203ENST00000409672 C7orf34Q96L11 122 aa8.07□□□□□ -1.12
SCN9A-203ENST00000409672 PSKH2Q96QS6 385 aa8.07□□□□□ -1.12
SCN9A-203ENST00000409672 F2RL3Q96RI0 385 aa8.07□□□□□ -1.12
SCN9A-203ENST00000409672 ERVK-6Q9BXR3 956 aa8.07□□□□□ -1.12
SCN9A-203ENST00000409672 NUDT15Q9NV35 164 aa8.07□□□□□ -1.12
SCN9A-203ENST00000409672 SASH3O75995 380 aa8.07□□□□□ -1.12
SCN9A-203ENST00000409672 AKR1C4P17516 323 aa8.07□□□□□ -1.12
SCN9A-203ENST00000409672 CD9P21926 228 aa8.07□□□□□ -1.12
SCN9A-203ENST00000409672 MLLT6P55198 1093 aaPredicted RBP8.07□□□□□ -1.12
SCN9A-203ENST00000409672 ADAM17P78536 824 aa8.07□□□□□ -1.12
SCN9A-203ENST00000409672 E2F1Q01094 437 aa8.07□□□□□ -1.12
SCN9A-203ENST00000409672 MYBPHQ13203 477 aa8.07□□□□□ -1.12
SCN9A-203ENST00000409672 FAM83CQ9BQN1 747 aa8.07□□□□□ -1.12
SCN9A-203ENST00000409672 ACTL8Q9H568 366 aa8.07□□□□□ -1.12
SCN9A-203ENST00000409672 OBP2BQ9NPH6 170 aa8.07□□□□□ -1.12
SCN9A-203ENST00000409672 VNN1O95497 513 aa8.07□□□□□ -1.12
SCN9A-203ENST00000409672 CHRM1P11229 460 aaPredicted RBP8.07□□□□□ -1.12
SCN9A-203ENST00000409672 TNFSF4P23510 183 aa8.07□□□□□ -1.12
SCN9A-203ENST00000409672 FOXC1Q12948 553 aa8.07□□□□□ -1.12
SCN9A-203ENST00000409672 AKAP1Q92667 903 aaKnown RBP eCLIP8.07□□□□□ -1.12
SCN9A-203ENST00000409672 ZC3H10Q96K80 434 aaKnown RBP8.07□□□□□ -1.12
SCN9A-203ENST00000409672 LMF1Q96S06 567 aa8.07□□□□□ -1.12
SCN9A-203ENST00000409672 C12orf49Q9H741 205 aa8.07□□□□□ -1.12
SCN9A-203ENST00000409672 RNPEPL1Q9HAU8 725 aa8.07□□□□□ -1.12
SCN9A-203ENST00000409672 C2orf42Q9NWW7 574 aa8.07□□□□□ -1.12
SCN9A-203ENST00000409672 MLXQ9UH92 298 aa8.07□□□□□ -1.12
SCN9A-203ENST00000409672 DHDHQ9UQ10 334 aa8.07□□□□□ -1.12
SCN9A-203ENST00000409672 PCDHGB1Q9Y5G3 927 aa8.07□□□□□ -1.12
SCN9A-203ENST00000409672 SHROOM3Q8TF72 1996 aa8.07□□□□□ -1.12
SCN9A-203ENST00000409672 CD8B2A6NJW9 211 aa8.07□□□□□ -1.12
SCN9A-203ENST00000409672 M0QX08 132 aa8.07□□□□□ -1.12
SCN9A-203ENST00000409672 LDB3O75112 727 aa8.07□□□□□ -1.12
SCN9A-203ENST00000409672 ZNF888P0CJ79 500 aaPredicted RBP8.07□□□□□ -1.12
SCN9A-203ENST00000409672 CD8BP10966 210 aa8.07□□□□□ -1.12
SCN9A-203ENST00000409672 SLC2A2P11168 524 aaPredicted RBP8.07□□□□□ -1.12
SCN9A-203ENST00000409672 RGS6P49758 472 aa8.07□□□□□ -1.12
SCN9A-203ENST00000409672 OR52W1Q6IF63 320 aa8.07□□□□□ -1.12
SCN9A-203ENST00000409672 IL20RBQ6UXL0 311 aa8.07□□□□□ -1.12
SCN9A-203ENST00000409672 GLYATL2Q8WU03 294 aa8.07□□□□□ -1.12
SCN9A-203ENST00000409672 FAM71F1Q96KD3 344 aaPredicted RBP8.07□□□□□ -1.12
SCN9A-203ENST00000409672 FOXQ1Q9C009 403 aa8.07□□□□□ -1.12
SCN9A-203ENST00000409672 ITM2CQ9NQX7 267 aa8.07□□□□□ -1.12
SCN9A-203ENST00000409672 RCOR3Q9P2K3 495 aaPredicted RBP8.07□□□□□ -1.12
SCN9A-203ENST00000409672 UBR1Q8IWV7 1749 aa8.07□□□□□ -1.12
SCN9A-203ENST00000409672 AADACL4Q5VUY2 407 aa8.07□□□□□ -1.12
SCN9A-203ENST00000409672 FUKQ8N0W3 1084 aa8.07□□□□□ -1.12
SCN9A-203ENST00000409672 KRTCAP2Q8N6L1 136 aa8.07□□□□□ -1.12
SCN9A-203ENST00000409672 PUM2Q8TB72 1066 aaKnown RBP eCLIP8.07□□□□□ -1.12
SCN9A-203ENST00000409672 GATAD2BQ8WXI9 593 aa8.07□□□□□ -1.12
SCN9A-203ENST00000409672 DECR2Q9NUI1 292 aa8.07□□□□□ -1.12
SCN9A-203ENST00000409672 ZDHHC2Q9UIJ5 367 aa8.07□□□□□ -1.12
SCN9A-203ENST00000409672 NUDT21O43809 227 aaKnown RBP8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms