RNA–Protein interactions for RNA: ENST00000409458.3

GPNMB-203, Transcript of glycoprotein nmb, humanhuman

TSL 1 (best) BASIC

Gene GPNMB, Length 1,673 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-203ENST00000409458 TIPRLO75663 272 aa13.27□□□□□ -0.29
GPNMB-203ENST00000409458 ETFAP13804 333 aa13.27□□□□□ -0.29
GPNMB-203ENST00000409458 PNLIPP16233 465 aa13.27□□□□□ -0.29
GPNMB-203ENST00000409458 PEX2P28328 305 aa13.27□□□□□ -0.29
GPNMB-203ENST00000409458 FEN1P39748 380 aaKnown RBP13.27□□□□□ -0.29
GPNMB-203ENST00000409458 CRATP43155 626 aa13.27□□□□□ -0.29
GPNMB-203ENST00000409458 SEPHS1P49903 392 aa13.27□□□□□ -0.29
GPNMB-203ENST00000409458 SHC2P98077 582 aa13.27□□□□□ -0.29
GPNMB-203ENST00000409458 CEBPEQ15744 281 aa13.27□□□□□ -0.29
GPNMB-203ENST00000409458 VMACQ2NL98 169 aa13.27□□□□□ -0.29
GPNMB-203ENST00000409458 MTX3Q5HYI7 312 aa13.27□□□□□ -0.29
GPNMB-203ENST00000409458 TBCELQ5QJ74 424 aa13.27□□□□□ -0.29
GPNMB-203ENST00000409458 SNAP47Q5SQN1 464 aa13.27□□□□□ -0.29
GPNMB-203ENST00000409458 LPCAT4Q643R3 524 aa13.27□□□□□ -0.29
GPNMB-203ENST00000409458 SAXO2Q658L1 398 aa13.27□□□□□ -0.29
GPNMB-203ENST00000409458 OR52E8Q6IFG1 317 aa13.27□□□□□ -0.29
GPNMB-203ENST00000409458 CARFQ8N187 725 aa13.27□□□□□ -0.29
GPNMB-203ENST00000409458 FAM181AQ8N9Y4 354 aa13.27□□□□□ -0.29
GPNMB-203ENST00000409458 OR9A4Q8NGU2 314 aa13.27□□□□□ -0.29
GPNMB-203ENST00000409458 PSMA8Q8TAA3 256 aa13.27□□□□□ -0.29
GPNMB-203ENST00000409458 NETO1Q8TDF5 533 aa13.27□□□□□ -0.29
GPNMB-203ENST00000409458 LRTOMTQ8WZ04 291 aa13.27□□□□□ -0.29
GPNMB-203ENST00000409458 MAL2Q969L2 176 aa13.27□□□□□ -0.29
GPNMB-203ENST00000409458 ZNF681Q96N22 645 aa13.27□□□□□ -0.29
GPNMB-203ENST00000409458 SPATA9Q9BWV2 254 aa13.27□□□□□ -0.29
GPNMB-203ENST00000409458 GTPBP2Q9BX10 602 aaKnown RBP13.27□□□□□ -0.29
GPNMB-203ENST00000409458 ARMC1Q9NVT9 282 aa13.27□□□□□ -0.29
GPNMB-203ENST00000409458 ANAPC2Q9UJX6 822 aa13.27□□□□□ -0.29
GPNMB-203ENST00000409458 GMEB2Q9UKD1 530 aa13.27□□□□□ -0.29
GPNMB-203ENST00000409458 MAP4K5Q9Y4K4 846 aa13.27□□□□□ -0.29
GPNMB-203ENST00000409458 WDFY4Q6ZS81 3184 aa13.27□□□□□ -0.29
GPNMB-203ENST00000409458 ASXL3Q9C0F0 2248 aa13.26□□□□□ -0.29
GPNMB-203ENST00000409458 RP1P56715 2156 aa13.26□□□□□ -0.29
GPNMB-203ENST00000409458 CPED1A4D0V7 1026 aa13.26□□□□□ -0.29
GPNMB-203ENST00000409458 TXNDC9O14530 226 aa13.26□□□□□ -0.29
GPNMB-203ENST00000409458 CASQ2O14958 399 aaPredicted RBP13.26□□□□□ -0.29
GPNMB-203ENST00000409458 TNFRSF21O75509 655 aa13.26□□□□□ -0.29
GPNMB-203ENST00000409458 KRT75O95678 551 aa13.26□□□□□ -0.29
GPNMB-203ENST00000409458 GPC1P35052 558 aa13.26□□□□□ -0.29
GPNMB-203ENST00000409458 SIM1P81133 766 aaPredicted RBP13.26□□□□□ -0.29
GPNMB-203ENST00000409458 SPIDRQ14159 915 aa13.26□□□□□ -0.29
GPNMB-203ENST00000409458 TRIP10Q15642 601 aa13.26□□□□□ -0.29
GPNMB-203ENST00000409458 SPDYE7PQ495Y7 208 aa13.26□□□□□ -0.29
GPNMB-203ENST00000409458 GCNT6Q5T4J0 391 aa13.26□□□□□ -0.29
GPNMB-203ENST00000409458 HMBOX1Q6NT76 420 aa13.26□□□□□ -0.29
GPNMB-203ENST00000409458 ERICH5Q6P6B1 374 aa13.26□□□□□ -0.29
GPNMB-203ENST00000409458 WDR74Q6RFH5 385 aaPredicted RBP13.26□□□□□ -0.29
GPNMB-203ENST00000409458 PRSS42Q7Z5A4 293 aa13.26□□□□□ -0.29
GPNMB-203ENST00000409458 FAM86B1Q8N7N1 296 aa13.26□□□□□ -0.29
GPNMB-203ENST00000409458 TMEM102Q8N9M5 508 aaPredicted RBP13.26□□□□□ -0.29
GPNMB-203ENST00000409458 TMEM52Q8NDY8 209 aa13.26□□□□□ -0.29
GPNMB-203ENST00000409458 OR52E4Q8NGH9 312 aa13.26□□□□□ -0.29
GPNMB-203ENST00000409458 ZFP28Q8NHY6 868 aa13.26□□□□□ -0.29
GPNMB-203ENST00000409458 FBXO30Q8TB52 745 aa13.26□□□□□ -0.29
GPNMB-203ENST00000409458 NEURL3Q96EH8 262 aa13.26□□□□□ -0.29
GPNMB-203ENST00000409458 ANKHQ9HCJ1 492 aa13.26□□□□□ -0.29
GPNMB-203ENST00000409458 IRAK4Q9NWZ3 460 aa13.26□□□□□ -0.29
GPNMB-203ENST00000409458 MS4A12Q9NXJ0 267 aa13.26□□□□□ -0.29
GPNMB-203ENST00000409458 A0A0A6YYC8 382 aaPredicted RBP13.25□□□□□ -0.29
GPNMB-203ENST00000409458 FAM86C2PA6NEL3 165 aa13.25□□□□□ -0.29
GPNMB-203ENST00000409458 I3L1I5 382 aaPredicted RBP13.25□□□□□ -0.29
GPNMB-203ENST00000409458 FOXS1O43638 330 aa13.25□□□□□ -0.29
GPNMB-203ENST00000409458 SERPINA1P01009 418 aa13.25□□□□□ -0.29
GPNMB-203ENST00000409458 RETP07949 1114 aa13.25□□□□□ -0.29
GPNMB-203ENST00000409458 SYPP08247 313 aa13.25□□□□□ -0.29
GPNMB-203ENST00000409458 UMPSP11172 480 aa13.25□□□□□ -0.29
GPNMB-203ENST00000409458 CSNK2A2P19784 350 aaPredicted RBP13.25□□□□□ -0.29
GPNMB-203ENST00000409458 MPLP40238 635 aa13.25□□□□□ -0.29
GPNMB-203ENST00000409458 RPS26P62854 115 aaKnown RBP13.25□□□□□ -0.29
GPNMB-203ENST00000409458 VAC14Q08AM6 782 aa13.25□□□□□ -0.29
GPNMB-203ENST00000409458 FADDQ13158 208 aa13.25□□□□□ -0.29
GPNMB-203ENST00000409458 MAP7Q14244 749 aa13.25□□□□□ -0.29
GPNMB-203ENST00000409458 TCEAL6Q6IPX3 200 aa13.25□□□□□ -0.29
GPNMB-203ENST00000409458 ENPP6Q6UWR7 440 aa13.25□□□□□ -0.29
GPNMB-203ENST00000409458 TMPRSS9Q7Z410 1059 aa13.25□□□□□ -0.29
GPNMB-203ENST00000409458 KBTBD2Q8IY47 623 aa13.25□□□□□ -0.29
GPNMB-203ENST00000409458 CCDC116Q8IYX3 515 aa13.25□□□□□ -0.29
GPNMB-203ENST00000409458 OR6C4Q8NGE1 309 aa13.25□□□□□ -0.29
GPNMB-203ENST00000409458 TCEAL3Q969E4 200 aa13.25□□□□□ -0.29
GPNMB-203ENST00000409458 SEPHS2Q99611 448 aa13.25□□□□□ -0.29
GPNMB-203ENST00000409458 EFHD1Q9BUP0 239 aa13.25□□□□□ -0.29
GPNMB-203ENST00000409458 NPLQ9BXD5 320 aaPredicted RBP13.25□□□□□ -0.29
GPNMB-203ENST00000409458 SPRTNQ9H040 489 aaPredicted RBP13.25□□□□□ -0.29
GPNMB-203ENST00000409458 RAD21L1Q9H4I0 556 aa13.25□□□□□ -0.29
GPNMB-203ENST00000409458 GIMAP4Q9NUV9 329 aa13.25□□□□□ -0.29
GPNMB-203ENST00000409458 SEMA5BQ9P283 1151 aa13.25□□□□□ -0.29
GPNMB-203ENST00000409458 ATXN7L1Q9ULK2 861 aaPredicted RBP13.25□□□□□ -0.29
GPNMB-203ENST00000409458 FAF1Q9UNN5 650 aaPredicted RBP13.25□□□□□ -0.29
GPNMB-203ENST00000409458 ZNF780BQ9Y6R6 833 aa13.25□□□□□ -0.29
GPNMB-203ENST00000409458 HYKKA2RU49 373 aa13.24□□□□□ -0.29
GPNMB-203ENST00000409458 EME2A4GXA9 379 aaPredicted RBP13.24□□□□□ -0.29
GPNMB-203ENST00000409458 FITM1A5D6W6 292 aa13.24□□□□□ -0.29
GPNMB-203ENST00000409458 A8MU76 341 aa13.24□□□□□ -0.29
GPNMB-203ENST00000409458 CYR61O00622 381 aa13.24□□□□□ -0.29
GPNMB-203ENST00000409458 TPST1O60507 370 aa13.24□□□□□ -0.29
GPNMB-203ENST00000409458 IL10P22301 178 aa13.24□□□□□ -0.29
GPNMB-203ENST00000409458 TLX1P31314 330 aaPredicted RBP13.24□□□□□ -0.29
GPNMB-203ENST00000409458 PCGF2P35227 344 aa13.24□□□□□ -0.29
GPNMB-203ENST00000409458 RAB38P57729 211 aa13.24□□□□□ -0.29
GPNMB-203ENST00000409458 HSD11B2P80365 405 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms