RNA–Protein interactions for RNA: ENST00000409403.6

CLK1-202, Transcript of CDC like kinase 1, humanhuman

TSL 5

Gene CLK1, Length 1,664 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-202ENST00000409403 NSMCE2Q96MF7 247 aa5.22□□□□□ -1.57
CLK1-202ENST00000409403 GAD1Q99259 594 aa5.22□□□□□ -1.57
CLK1-202ENST00000409403 SLC30A2Q9BRI3 323 aa5.22□□□□□ -1.57
CLK1-202ENST00000409403 LXNQ9BS40 222 aa5.22□□□□□ -1.57
CLK1-202ENST00000409403 TEKT3Q9BXF9 490 aa5.22□□□□□ -1.57
CLK1-202ENST00000409403 TOR3AQ9H497 397 aa5.22□□□□□ -1.57
CLK1-202ENST00000409403 PLAC1Q9HBJ0 212 aa5.22□□□□□ -1.57
CLK1-202ENST00000409403 FANCFQ9NPI8 374 aa5.22□□□□□ -1.57
CLK1-202ENST00000409403 ENTPD7Q9NQZ7 604 aa5.22□□□□□ -1.57
CLK1-202ENST00000409403 PLSCR3Q9NRY6 295 aa5.22□□□□□ -1.57
CLK1-202ENST00000409403 FAM49BQ9NUQ9 324 aa5.22□□□□□ -1.57
CLK1-202ENST00000409403 TMEM74BQ9NUR3 256 aa5.22□□□□□ -1.57
CLK1-202ENST00000409403 PARPBPQ9NWS1 579 aa5.22□□□□□ -1.57
CLK1-202ENST00000409403 DCAF16Q9NXF7 216 aa5.22□□□□□ -1.57
CLK1-202ENST00000409403 LOC100130705A0A1B0GUX0 176 aa5.21□□□□□ -1.57
CLK1-202ENST00000409403 EFCAB10A6NFE3 127 aa5.21□□□□□ -1.57
CLK1-202ENST00000409403 A8MX80 341 aa5.21□□□□□ -1.57
CLK1-202ENST00000409403 G3V2T6 193 aa5.21□□□□□ -1.57
CLK1-202ENST00000409403 NME4O00746 187 aa5.21□□□□□ -1.57
CLK1-202ENST00000409403 BCKDKO14874 412 aa5.21□□□□□ -1.57
CLK1-202ENST00000409403 RGS5O15539 181 aa5.21□□□□□ -1.57
CLK1-202ENST00000409403 PROM1O43490 865 aa5.21□□□□□ -1.57
CLK1-202ENST00000409403 PRPSAP2O60256 369 aa5.21□□□□□ -1.57
CLK1-202ENST00000409403 ACSL4O60488 711 aa5.21□□□□□ -1.57
CLK1-202ENST00000409403 PSMD10O75832 226 aa5.21□□□□□ -1.57
CLK1-202ENST00000409403 F9P00740 461 aa5.21□□□□□ -1.57
CLK1-202ENST00000409403 TNNC2P02585 160 aa5.21□□□□□ -1.57
CLK1-202ENST00000409403 CHRNGP07510 517 aa5.21□□□□□ -1.57
CLK1-202ENST00000409403 RBP1P09455 135 aa5.21□□□□□ -1.57
CLK1-202ENST00000409403 ZP3P21754 424 aa5.21□□□□□ -1.57
CLK1-202ENST00000409403 CPN2P22792 545 aa5.21□□□□□ -1.57
CLK1-202ENST00000409403 MYL9P24844 172 aa5.21□□□□□ -1.57
CLK1-202ENST00000409403 GTF2E2P29084 291 aaKnown RBP5.21□□□□□ -1.57
CLK1-202ENST00000409403 FMO4P31512 558 aa5.21□□□□□ -1.57
CLK1-202ENST00000409403 EVI2BP34910 448 aa5.21□□□□□ -1.57
CLK1-202ENST00000409403 HMGCLP35914 325 aa5.21□□□□□ -1.57
CLK1-202ENST00000409403 SERPINF1P36955 418 aa5.21□□□□□ -1.57
CLK1-202ENST00000409403 GRIA1P42261 906 aa5.21□□□□□ -1.57
CLK1-202ENST00000409403 NR2C2P49116 596 aa5.21□□□□□ -1.57
CLK1-202ENST00000409403 HOXA1P49639 335 aaPredicted RBP5.21□□□□□ -1.57
CLK1-202ENST00000409403 NCS1P62166 190 aa5.21□□□□□ -1.57
CLK1-202ENST00000409403 CD47Q08722 323 aa5.21□□□□□ -1.57
CLK1-202ENST00000409403 MGAT3Q09327 533 aa5.21□□□□□ -1.57
CLK1-202ENST00000409403 SNTA1Q13424 505 aa5.21□□□□□ -1.57
CLK1-202ENST00000409403 KEAP1Q14145 624 aa5.21□□□□□ -1.57
CLK1-202ENST00000409403 EFR3AQ14156 821 aa5.21□□□□□ -1.57
CLK1-202ENST00000409403 COL28A1Q2UY09 1125 aa5.21□□□□□ -1.57
CLK1-202ENST00000409403 HSDL1Q3SXM5 330 aa5.21□□□□□ -1.57
CLK1-202ENST00000409403 EEF1AKMT2Q5JPI9 291 aaKnown RBP5.21□□□□□ -1.57
CLK1-202ENST00000409403 OTUD3Q5T2D3 398 aaPredicted RBP5.21□□□□□ -1.57
CLK1-202ENST00000409403 MRNIPQ6NTE8 343 aa5.21□□□□□ -1.57
CLK1-202ENST00000409403 TMEM65Q6PI78 240 aa5.21□□□□□ -1.57
CLK1-202ENST00000409403 BRAT1Q6PJG6 821 aa5.21□□□□□ -1.57
CLK1-202ENST00000409403 C19orf48Q6RUI8 117 aa5.21□□□□□ -1.57
CLK1-202ENST00000409403 TMEM270Q6UE05 265 aa5.21□□□□□ -1.57
CLK1-202ENST00000409403 ZNF600Q6ZNG1 722 aa5.21□□□□□ -1.57
CLK1-202ENST00000409403 C15orf39Q6ZRI6 1047 aa5.21□□□□□ -1.57
CLK1-202ENST00000409403 CCDC190Q86UF4 302 aa5.21□□□□□ -1.57
CLK1-202ENST00000409403 FAM160B2Q86V87 743 aa5.21□□□□□ -1.57
CLK1-202ENST00000409403 HIPK1Q86Z02 1210 aa5.21□□□□□ -1.57
CLK1-202ENST00000409403 CBWD2Q8IUF1 395 aa5.21□□□□□ -1.57
CLK1-202ENST00000409403 BBS7Q8IWZ6 715 aa5.21□□□□□ -1.57
CLK1-202ENST00000409403 RDH10Q8IZV5 341 aa5.21□□□□□ -1.57
CLK1-202ENST00000409403 OR8H2Q8N162 312 aa5.21□□□□□ -1.57
CLK1-202ENST00000409403 GDPD1Q8N9F7 314 aa5.21□□□□□ -1.57
CLK1-202ENST00000409403 KDM1BQ8NB78 822 aa5.21□□□□□ -1.57
CLK1-202ENST00000409403 SUMF1Q8NBK3 374 aa5.21□□□□□ -1.57
CLK1-202ENST00000409403 GPRC5AQ8NFJ5 357 aa5.21□□□□□ -1.57
CLK1-202ENST00000409403 SLC22A8Q8TCC7 542 aa5.21□□□□□ -1.57
CLK1-202ENST00000409403 STYXQ8WUJ0 223 aa5.21□□□□□ -1.57
CLK1-202ENST00000409403 PTP4A1Q93096 173 aa5.21□□□□□ -1.57
CLK1-202ENST00000409403 CERS2Q96G23 380 aa5.21□□□□□ -1.57
CLK1-202ENST00000409403 C20orf173Q96LM9 149 aa5.21□□□□□ -1.57
CLK1-202ENST00000409403 C8orf49Q96NF6 230 aa5.21□□□□□ -1.57
CLK1-202ENST00000409403 MRPL57Q9BQC6 102 aaKnown RBP5.21□□□□□ -1.57
CLK1-202ENST00000409403 SPNS1Q9H2V7 528 aa5.21□□□□□ -1.57
CLK1-202ENST00000409403 DUSP21Q9H596 190 aa5.21□□□□□ -1.57
CLK1-202ENST00000409403 TASP1Q9H6P5 420 aa5.21□□□□□ -1.57
CLK1-202ENST00000409403 NTN4Q9HB63 628 aa5.21□□□□□ -1.57
CLK1-202ENST00000409403 SMPD4Q9NXE4 827 aa5.21□□□□□ -1.57
CLK1-202ENST00000409403 GTSE1Q9NYZ3 720 aa5.21□□□□□ -1.57
CLK1-202ENST00000409403 ZNF224Q9NZL3 707 aa5.21□□□□□ -1.57
CLK1-202ENST00000409403 CCDC167Q9P0B6 97 aa5.21□□□□□ -1.57
CLK1-202ENST00000409403 DNAJB9Q9UBS3 223 aa5.21□□□□□ -1.57
CLK1-202ENST00000409403 FBXO40Q9UH90 709 aa5.21□□□□□ -1.57
CLK1-202ENST00000409403 ZDHHC2Q9UIJ5 367 aa5.21□□□□□ -1.57
CLK1-202ENST00000409403 CDH9Q9ULB4 789 aa5.21□□□□□ -1.57
CLK1-202ENST00000409403 FKBP7Q9Y680 259 aa5.21□□□□□ -1.57
CLK1-202ENST00000409403 FBN3Q75N90 2809 aa5.21□□□□□ -1.58
CLK1-202ENST00000409403 RALGAPA1Q6GYQ0 2036 aa5.21□□□□□ -1.58
CLK1-202ENST00000409403 TRGV11A0A075B6L2 103 aa5.21□□□□□ -1.58
CLK1-202ENST00000409403 WDR27A2RRH5 827 aa5.21□□□□□ -1.58
CLK1-202ENST00000409403 OR2A25A4D2G3 310 aa5.21□□□□□ -1.58
CLK1-202ENST00000409403 ZNF98A6NK75 572 aa5.21□□□□□ -1.58
CLK1-202ENST00000409403 E5RI56 91 aa5.21□□□□□ -1.58
CLK1-202ENST00000409403 SNAP23O00161 211 aa5.21□□□□□ -1.58
CLK1-202ENST00000409403 ACKR2O00590 384 aa5.21□□□□□ -1.58
CLK1-202ENST00000409403 PIP5K1BO14986 540 aa5.21□□□□□ -1.58
CLK1-202ENST00000409403 B4GAT1O43505 415 aa5.21□□□□□ -1.58
CLK1-202ENST00000409403 PTP4A3O75365 173 aa5.21□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms