RNA–Protein interactions for RNA: ENST00000409219.5

CHRNA1-203, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 3 BASIC

Gene CHRNA1, Length 1,466 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-203ENST00000409219 C1orf54Q8WWF1 131 aa11.78□□□□□ -0.52
CHRNA1-203ENST00000409219 TMEM158Q8WZ71 300 aa11.78□□□□□ -0.52
CHRNA1-203ENST00000409219 GAL3ST3Q96A11 431 aa11.78□□□□□ -0.52
CHRNA1-203ENST00000409219 JSRP1Q96MG2 331 aaPredicted RBP11.78□□□□□ -0.52
CHRNA1-203ENST00000409219 SECISBP2Q96T21 854 aaKnown RBP11.78□□□□□ -0.52
CHRNA1-203ENST00000409219 HOMER3Q9NSC5 361 aa11.78□□□□□ -0.52
CHRNA1-203ENST00000409219 ZNF446Q9NWS9 450 aa11.78□□□□□ -0.52
CHRNA1-203ENST00000409219 RNF14Q9UBS8 474 aa11.78□□□□□ -0.52
CHRNA1-203ENST00000409219 VTI1BQ9UEU0 232 aa11.78□□□□□ -0.52
CHRNA1-203ENST00000409219 AMFRQ9UKV5 643 aa11.78□□□□□ -0.52
CHRNA1-203ENST00000409219 CAMK2AQ9UQM7 478 aa11.78□□□□□ -0.52
CHRNA1-203ENST00000409219 MRPS33Q9Y291 106 aaKnown RBP11.78□□□□□ -0.52
CHRNA1-203ENST00000409219 CHCHD2Q9Y6H1 151 aaPredicted RBP11.78□□□□□ -0.52
CHRNA1-203ENST00000409219 MED12Q93074 2177 aa11.78□□□□□ -0.52
CHRNA1-203ENST00000409219 USF3Q68DE3 2245 aa11.77□□□□□ -0.52
CHRNA1-203ENST00000409219 SYNDIG1LA6NDD5 238 aa11.77□□□□□ -0.52
CHRNA1-203ENST00000409219 MIF4GDA9UHW6 222 aaKnown RBP11.77□□□□□ -0.52
CHRNA1-203ENST00000409219 AP3B1O00203 1094 aa11.77□□□□□ -0.52
CHRNA1-203ENST00000409219 CASKO14936 926 aa11.77□□□□□ -0.52
CHRNA1-203ENST00000409219 ERN1O75460 977 aaKnown RBP11.77□□□□□ -0.52
CHRNA1-203ENST00000409219 LRATO95237 230 aa11.77□□□□□ -0.52
CHRNA1-203ENST00000409219 PAMP19021 973 aa11.77□□□□□ -0.52
CHRNA1-203ENST00000409219 FPR1P21462 350 aa11.77□□□□□ -0.52
CHRNA1-203ENST00000409219 SAT1P21673 171 aa11.77□□□□□ -0.52
CHRNA1-203ENST00000409219 PTH2RP49190 550 aa11.77□□□□□ -0.52
CHRNA1-203ENST00000409219 TIAL1Q01085 375 aaKnown RBP eCLIP11.77□□□□□ -0.52
CHRNA1-203ENST00000409219 FOXF2Q12947 444 aa11.77□□□□□ -0.52
CHRNA1-203ENST00000409219 RBBP5Q15291 538 aaKnown RBP11.77□□□□□ -0.52
CHRNA1-203ENST00000409219 ACKR1Q16570 336 aa11.77□□□□□ -0.52
CHRNA1-203ENST00000409219 PIGGQ5H8A4 983 aa11.77□□□□□ -0.52
CHRNA1-203ENST00000409219 DCST1Q5T197 706 aa11.77□□□□□ -0.52
CHRNA1-203ENST00000409219 TMPRSS11BQ86T26 416 aa11.77□□□□□ -0.52
CHRNA1-203ENST00000409219 SPACA9Q96E40 222 aaPredicted RBP11.77□□□□□ -0.52
CHRNA1-203ENST00000409219 OSBPL9Q96SU4 736 aa11.77□□□□□ -0.52
CHRNA1-203ENST00000409219 NPLQ9BXD5 320 aaPredicted RBP11.77□□□□□ -0.52
CHRNA1-203ENST00000409219 PELI2Q9HAT8 420 aa11.77□□□□□ -0.52
CHRNA1-203ENST00000409219 TRMT6Q9UJA5 497 aaKnown RBP11.77□□□□□ -0.52
CHRNA1-203ENST00000409219 COMMD10Q9Y6G5 202 aa11.77□□□□□ -0.52
CHRNA1-203ENST00000409219 ABCA1O95477 2261 aa11.77□□□□□ -0.52
CHRNA1-203ENST00000409219 TCRBV7S3A2A0A539 114 aa11.76□□□□□ -0.53
CHRNA1-203ENST00000409219 C17orf105B2RV13 164 aa11.76□□□□□ -0.53
CHRNA1-203ENST00000409219 CYR61O00622 381 aa11.76□□□□□ -0.53
CHRNA1-203ENST00000409219 ERI3O43414 337 aaKnown RBP11.76□□□□□ -0.53
CHRNA1-203ENST00000409219 ETHE1O95571 254 aa11.76□□□□□ -0.53
CHRNA1-203ENST00000409219 FTCDO95954 541 aa11.76□□□□□ -0.53
CHRNA1-203ENST00000409219 TMIGD3P0DMS9 266 aaPredicted RBP11.76□□□□□ -0.53
CHRNA1-203ENST00000409219 HNRNPH1P31943 449 aaKnown RBP11.76□□□□□ -0.53
CHRNA1-203ENST00000409219 CPA2P48052 419 aa11.76□□□□□ -0.53
CHRNA1-203ENST00000409219 DMTNQ08495 405 aa11.76□□□□□ -0.53
CHRNA1-203ENST00000409219 TBL3Q12788 808 aaKnown RBP11.76□□□□□ -0.53
CHRNA1-203ENST00000409219 SF3B4Q15427 424 aaKnown RBP eCLIP11.76□□□□□ -0.53
CHRNA1-203ENST00000409219 VASNQ6EMK4 673 aa11.76□□□□□ -0.53
CHRNA1-203ENST00000409219 WDR93Q6P2C0 686 aa11.76□□□□□ -0.53
CHRNA1-203ENST00000409219 C9orf40Q8IXQ3 194 aa11.76□□□□□ -0.53
CHRNA1-203ENST00000409219 PALM2Q8IXS6 379 aa11.76□□□□□ -0.53
CHRNA1-203ENST00000409219 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP11.76□□□□□ -0.53
CHRNA1-203ENST00000409219 NOA1Q8NC60 698 aaKnown RBP11.76□□□□□ -0.53
CHRNA1-203ENST00000409219 FAM13CQ8NE31 585 aa11.76□□□□□ -0.53
CHRNA1-203ENST00000409219 OR10G3Q8NGC4 313 aa11.76□□□□□ -0.53
CHRNA1-203ENST00000409219 SLC22A8Q8TCC7 542 aa11.76□□□□□ -0.53
CHRNA1-203ENST00000409219 ZNF721Q8TF20 911 aa11.76□□□□□ -0.53
CHRNA1-203ENST00000409219 NTNG2Q96CW9 530 aa11.76□□□□□ -0.53
CHRNA1-203ENST00000409219 FAR2Q96K12 515 aa11.76□□□□□ -0.53
CHRNA1-203ENST00000409219 ZNF597Q96LX8 424 aa11.76□□□□□ -0.53
CHRNA1-203ENST00000409219 RUNDC3BQ96NL0 473 aa11.76□□□□□ -0.53
CHRNA1-203ENST00000409219 AIF1LQ9BQI0 150 aa11.76□□□□□ -0.53
CHRNA1-203ENST00000409219 ALOXE3Q9BYJ1 711 aa11.76□□□□□ -0.53
CHRNA1-203ENST00000409219 FRMD8P1Q9BZ68 369 aaPredicted RBP11.76□□□□□ -0.53
CHRNA1-203ENST00000409219 ARL15Q9NXU5 204 aa11.76□□□□□ -0.53
CHRNA1-203ENST00000409219 COPS7AQ9UBW8 275 aa11.76□□□□□ -0.53
CHRNA1-203ENST00000409219 CNOT11Q9UKZ1 510 aaKnown RBP11.76□□□□□ -0.53
CHRNA1-203ENST00000409219 SLC6A5Q9Y345 797 aa11.76□□□□□ -0.53
CHRNA1-203ENST00000409219 MED12LQ86YW9 2145 aa11.76□□□□□ -0.53
CHRNA1-203ENST00000409219 CR1P17927 2039 aa11.76□□□□□ -0.53
CHRNA1-203ENST00000409219 B3GALT2O43825 422 aa11.76□□□□□ -0.53
CHRNA1-203ENST00000409219 IFNA2P01563 188 aa11.76□□□□□ -0.53
CHRNA1-203ENST00000409219 C1QAP02745 245 aa11.76□□□□□ -0.53
CHRNA1-203ENST00000409219 ROS1P08922 2347 aa11.76□□□□□ -0.53
CHRNA1-203ENST00000409219 SOX18P35713 384 aa11.76□□□□□ -0.53
CHRNA1-203ENST00000409219 SLCO1A2P46721 670 aa11.76□□□□□ -0.53
CHRNA1-203ENST00000409219 RGS4P49798 205 aa11.76□□□□□ -0.53
CHRNA1-203ENST00000409219 STXBP1P61764 594 aaKnown RBP11.76□□□□□ -0.53
CHRNA1-203ENST00000409219 THOC5Q13769 683 aaKnown RBP11.76□□□□□ -0.53
CHRNA1-203ENST00000409219 DHX34Q14147 1143 aaKnown RBP11.76□□□□□ -0.53
CHRNA1-203ENST00000409219 CAPRIN1Q14444 709 aaKnown RBP11.76□□□□□ -0.53
CHRNA1-203ENST00000409219 UGT3A1Q6NUS8 523 aa11.76□□□□□ -0.53
CHRNA1-203ENST00000409219 SYDE1Q6ZW31 735 aaPredicted RBP11.76□□□□□ -0.53
CHRNA1-203ENST00000409219 MYO1HQ8N1T3 1032 aa11.76□□□□□ -0.53
CHRNA1-203ENST00000409219 MMGT1Q8N4V1 131 aa11.76□□□□□ -0.53
CHRNA1-203ENST00000409219 NUBPLQ8TB37 319 aa11.76□□□□□ -0.53
CHRNA1-203ENST00000409219 ZNF669Q96BR6 464 aaPredicted RBP11.76□□□□□ -0.53
CHRNA1-203ENST00000409219 MS4A6EQ96DS6 147 aa11.76□□□□□ -0.53
CHRNA1-203ENST00000409219 WDYHV1Q96HA8 205 aa11.76□□□□□ -0.53
CHRNA1-203ENST00000409219 QRFPRQ96P65 431 aa11.76□□□□□ -0.53
CHRNA1-203ENST00000409219 DOHHQ9BU89 302 aa11.76□□□□□ -0.53
CHRNA1-203ENST00000409219 SFXN3Q9BWM7 321 aa11.76□□□□□ -0.53
CHRNA1-203ENST00000409219 UGT2B28Q9BY64 529 aa11.76□□□□□ -0.53
CHRNA1-203ENST00000409219 CNIH4Q9P003 139 aa11.76□□□□□ -0.53
CHRNA1-203ENST00000409219 NDRG3Q9UGV2 375 aa11.76□□□□□ -0.53
CHRNA1-203ENST00000409219 CTNSO60931 367 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms