RNA–Protein interactions for RNA: ENST00000409020.5

NIF3L1-202, Transcript of NGG1 interacting factor 3 like 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene NIF3L1, Length 1,680 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-202ENST00000409020 CELA2AP08217 269 aa9.14□□□□□ -0.95
NIF3L1-202ENST00000409020 RNF224P0DH78 156 aa9.14□□□□□ -0.95
NIF3L1-202ENST00000409020 RPS2P15880 293 aaKnown RBP9.14□□□□□ -0.95
NIF3L1-202ENST00000409020 CHN1P15882 459 aa9.14□□□□□ -0.95
NIF3L1-202ENST00000409020 SAT1P21673 171 aa9.14□□□□□ -0.95
NIF3L1-202ENST00000409020 FBLP22087 321 aaKnown RBP9.14□□□□□ -0.95
NIF3L1-202ENST00000409020 FDXRP22570 491 aa9.14□□□□□ -0.95
NIF3L1-202ENST00000409020 ITGA3P26006 1051 aa9.14□□□□□ -0.95
NIF3L1-202ENST00000409020 LSM11P83369 360 aaKnown RBP eCLIP9.14□□□□□ -0.95
NIF3L1-202ENST00000409020 MEF2AQ02078 507 aaPredicted RBP9.14□□□□□ -0.95
NIF3L1-202ENST00000409020 INPP5JQ15735 1006 aaPredicted RBP9.14□□□□□ -0.95
NIF3L1-202ENST00000409020 HIF1AQ16665 826 aa9.14□□□□□ -0.95
NIF3L1-202ENST00000409020 LSM12Q3MHD2 195 aaKnown RBP9.14□□□□□ -0.95
NIF3L1-202ENST00000409020 VWA5B1Q5TIE3 1220 aa9.14□□□□□ -0.95
NIF3L1-202ENST00000409020 PRAMEF13Q5VWM6 474 aa9.14□□□□□ -0.95
NIF3L1-202ENST00000409020 AGTRAPQ6RW13 159 aa9.14□□□□□ -0.95
NIF3L1-202ENST00000409020 CLEC18BQ6UXF7 455 aa9.14□□□□□ -0.95
NIF3L1-202ENST00000409020 LINC00518Q8N0U6 118 aa9.14□□□□□ -0.95
NIF3L1-202ENST00000409020 PDIK1LQ8N165 341 aa9.14□□□□□ -0.95
NIF3L1-202ENST00000409020 FITM2Q8N6M3 262 aa9.14□□□□□ -0.95
NIF3L1-202ENST00000409020 CLEC18CQ8NCF0 446 aa9.14□□□□□ -0.95
NIF3L1-202ENST00000409020 PRR7Q8TB68 274 aa9.14□□□□□ -0.95
NIF3L1-202ENST00000409020 FANK1Q8TC84 345 aa9.14□□□□□ -0.95
NIF3L1-202ENST00000409020 SLC47A1Q96FL8 570 aa9.14□□□□□ -0.95
NIF3L1-202ENST00000409020 LRGUKQ96M69 825 aa9.14□□□□□ -0.95
NIF3L1-202ENST00000409020 FER1L6-AS2Q96M78 137 aa9.14□□□□□ -0.95
NIF3L1-202ENST00000409020 MNTQ99583 582 aa9.14□□□□□ -0.95
NIF3L1-202ENST00000409020 CRB3Q9BUF7 120 aa9.14□□□□□ -0.95
NIF3L1-202ENST00000409020 ZNF160Q9HCG1 818 aa9.14□□□□□ -0.95
NIF3L1-202ENST00000409020 SMYD2Q9NRG4 433 aa9.14□□□□□ -0.95
NIF3L1-202ENST00000409020 INTS9Q9NV88 658 aaKnown RBP9.14□□□□□ -0.95
NIF3L1-202ENST00000409020 TAS2R13Q9NYV9 303 aa9.14□□□□□ -0.95
NIF3L1-202ENST00000409020 C3orf18Q9UK00 162 aa9.14□□□□□ -0.95
NIF3L1-202ENST00000409020 NFU1Q9UMS0 254 aa9.14□□□□□ -0.95
NIF3L1-202ENST00000409020 TRIM33Q9UPN9 1127 aa9.14□□□□□ -0.95
NIF3L1-202ENST00000409020 ADGRG4Q8IZF6 3080 aa9.14□□□□□ -0.95
NIF3L1-202ENST00000409020 DOPEY1Q5JWR5 2465 aa9.14□□□□□ -0.95
NIF3L1-202ENST00000409020 IGLV3-12A0A075B6K2 115 aa9.13□□□□□ -0.95
NIF3L1-202ENST00000409020 TCP11X1B4DZS4 312 aa9.13□□□□□ -0.95
NIF3L1-202ENST00000409020 H3BUI4 141 aa9.13□□□□□ -0.95
NIF3L1-202ENST00000409020 LCMT2O60294 686 aaKnown RBP9.13□□□□□ -0.95
NIF3L1-202ENST00000409020 DPM1O60762 260 aa9.13□□□□□ -0.95
NIF3L1-202ENST00000409020 TSC22D2O75157 780 aa9.13□□□□□ -0.95
NIF3L1-202ENST00000409020 SMIM18P0DKX4 95 aa9.13□□□□□ -0.95
NIF3L1-202ENST00000409020 CDH1P12830 882 aa9.13□□□□□ -0.95
NIF3L1-202ENST00000409020 UQCRBP14927 111 aa9.13□□□□□ -0.95
NIF3L1-202ENST00000409020 BCL6P41182 706 aa9.13□□□□□ -0.95
NIF3L1-202ENST00000409020 NR1H2P55055 460 aa9.13□□□□□ -0.95
NIF3L1-202ENST00000409020 RAC1P63000 192 aa9.13□□□□□ -0.95
NIF3L1-202ENST00000409020 CSNK1G2P78368 415 aa9.13□□□□□ -0.95
NIF3L1-202ENST00000409020 EEF1A2Q05639 463 aaKnown RBP9.13□□□□□ -0.95
NIF3L1-202ENST00000409020 PDIA2Q13087 525 aaKnown RBP9.13□□□□□ -0.95
NIF3L1-202ENST00000409020 MRPL49Q13405 166 aaKnown RBP9.13□□□□□ -0.95
NIF3L1-202ENST00000409020 NAE1Q13564 534 aa9.13□□□□□ -0.95
NIF3L1-202ENST00000409020 UBAP2LQ14157 1087 aaKnown RBP9.13□□□□□ -0.95
NIF3L1-202ENST00000409020 EFTUD2Q15029 972 aaKnown RBP eCLIP9.13□□□□□ -0.952e-11■■■■■ 41.9
NIF3L1-202ENST00000409020 RBBP7Q16576 425 aa9.13□□□□□ -0.95
NIF3L1-202ENST00000409020 AGAP7PQ5VUJ5 663 aa9.13□□□□□ -0.95
NIF3L1-202ENST00000409020 ANGPTL8Q6UXH0 198 aa9.13□□□□□ -0.95
NIF3L1-202ENST00000409020 KIAA0408Q6ZU52 694 aa9.13□□□□□ -0.95
NIF3L1-202ENST00000409020 SYDE1Q6ZW31 735 aaPredicted RBP9.13□□□□□ -0.95
NIF3L1-202ENST00000409020 CUZD1Q86UP6 607 aa9.13□□□□□ -0.95
NIF3L1-202ENST00000409020 ZC3H7AQ8IWR0 971 aaKnown RBP9.13□□□□□ -0.95
NIF3L1-202ENST00000409020 CCNYL1Q8N7R7 359 aa9.13□□□□□ -0.95
NIF3L1-202ENST00000409020 FBXO36Q8NEA4 188 aa9.13□□□□□ -0.95
NIF3L1-202ENST00000409020 OR9A4Q8NGU2 314 aa9.13□□□□□ -0.95
NIF3L1-202ENST00000409020 ZFP28Q8NHY6 868 aa9.13□□□□□ -0.95
NIF3L1-202ENST00000409020 PNPLA2Q96AD5 504 aa9.13□□□□□ -0.95
NIF3L1-202ENST00000409020 MMABQ96EY8 250 aaPredicted RBP9.13□□□□□ -0.95
NIF3L1-202ENST00000409020 ZNF486Q96H40 463 aaPredicted RBP9.13□□□□□ -0.95
NIF3L1-202ENST00000409020 IP6K3Q96PC2 410 aa9.13□□□□□ -0.95
NIF3L1-202ENST00000409020 BTBD9Q96Q07 612 aa9.13□□□□□ -0.95
NIF3L1-202ENST00000409020 OR4K3Q96R72 315 aa9.13□□□□□ -0.95
NIF3L1-202ENST00000409020 USB1Q9BQ65 265 aaKnown RBP9.13□□□□□ -0.95
NIF3L1-202ENST00000409020 NAT9Q9BTE0 207 aa9.13□□□□□ -0.95
NIF3L1-202ENST00000409020 SPNS1Q9H2V7 528 aa9.13□□□□□ -0.95
NIF3L1-202ENST00000409020 NTN4Q9HB63 628 aa9.13□□□□□ -0.95
NIF3L1-202ENST00000409020 ATP13A2Q9NQ11 1180 aa9.13□□□□□ -0.95
NIF3L1-202ENST00000409020 SLAMF7Q9NQ25 335 aa9.13□□□□□ -0.95
NIF3L1-202ENST00000409020 SAR1AQ9NR31 198 aa9.13□□□□□ -0.95
NIF3L1-202ENST00000409020 TRPC4Q9UBN4 977 aa9.13□□□□□ -0.95
NIF3L1-202ENST00000409020 REV1Q9UBZ9 1251 aa9.13□□□□□ -0.95
NIF3L1-202ENST00000409020 ZNF282Q9UDV7 671 aaPredicted RBP9.13□□□□□ -0.95
NIF3L1-202ENST00000409020 VPS4AQ9UN37 437 aa9.13□□□□□ -0.95
NIF3L1-202ENST00000409020 NTNG1Q9Y2I2 539 aa9.13□□□□□ -0.95
NIF3L1-202ENST00000409020 SNX8Q9Y5X2 465 aa9.13□□□□□ -0.95
NIF3L1-202ENST00000409020 CACNG2Q9Y698 323 aa9.13□□□□□ -0.95
NIF3L1-202ENST00000409020 DCHS2Q6V1P9 2916 aa9.13□□□□□ -0.95
NIF3L1-202ENST00000409020 PCM1Q15154 2024 aa9.13□□□□□ -0.95
NIF3L1-202ENST00000409020 CCDC160A6NGH7 325 aa9.13□□□□□ -0.95
NIF3L1-202ENST00000409020 ZNF839A8K0R7 811 aa9.13□□□□□ -0.95
NIF3L1-202ENST00000409020 CDC7O00311 574 aa9.13□□□□□ -0.95
NIF3L1-202ENST00000409020 RAD51CO43502 376 aa9.13□□□□□ -0.95
NIF3L1-202ENST00000409020 CCDC22O60826 627 aa9.13□□□□□ -0.95
NIF3L1-202ENST00000409020 CCNDBP1O95273 360 aa9.13□□□□□ -0.95
NIF3L1-202ENST00000409020 GUCA1CO95843 209 aa9.13□□□□□ -0.95
NIF3L1-202ENST00000409020 SHBGP04278 402 aa9.13□□□□□ -0.95
NIF3L1-202ENST00000409020 TFAP2AP05549 437 aa9.13□□□□□ -0.95
NIF3L1-202ENST00000409020 CD63P08962 238 aa9.13□□□□□ -0.95
NIF3L1-202ENST00000409020 TFPTP0C1Z6 253 aa9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms