RNA–Protein interactions for RNA: ENST00000406938.2

CHKB-201, Transcript of choline kinase beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHKB, Length 1,638 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-201ENST00000406938 FGF17O60258 216 aa19.26■□□□□ 0.67
CHKB-201ENST00000406938 LDB3O75112 727 aa19.26■□□□□ 0.67
CHKB-201ENST00000406938 JRKO75564 520 aa19.26■□□□□ 0.67
CHKB-201ENST00000406938 FHP07954 510 aa19.26■□□□□ 0.67
CHKB-201ENST00000406938 KRT16P08779 473 aa19.26■□□□□ 0.67
CHKB-201ENST00000406938 C8orf89P0DMQ9 161 aa19.26■□□□□ 0.67
CHKB-201ENST00000406938 NTSP30990 170 aa19.26■□□□□ 0.67
CHKB-201ENST00000406938 CPOXP36551 454 aa19.26■□□□□ 0.67
CHKB-201ENST00000406938 FRKP42685 505 aaPredicted RBP19.26■□□□□ 0.67
CHKB-201ENST00000406938 CDKN2CP42773 168 aa19.26■□□□□ 0.67
CHKB-201ENST00000406938 RASSF2P50749 326 aa19.26■□□□□ 0.67
CHKB-201ENST00000406938 PCBP4P57723 403 aaKnown RBP19.26■□□□□ 0.67
CHKB-201ENST00000406938 DCDP81605 110 aaKnown RBP19.26■□□□□ 0.67
CHKB-201ENST00000406938 FOLH1Q04609 750 aa19.26■□□□□ 0.67
CHKB-201ENST00000406938 ERV3-1Q14264 604 aa19.26■□□□□ 0.67
CHKB-201ENST00000406938 ZNF750Q32MQ0 723 aa19.26■□□□□ 0.67
CHKB-201ENST00000406938 TRMT5Q32P41 509 aaKnown RBP19.26■□□□□ 0.67
CHKB-201ENST00000406938 DHDDSQ86SQ9 333 aa19.26■□□□□ 0.67
CHKB-201ENST00000406938 OR4N5Q8IXE1 308 aa19.26■□□□□ 0.67
CHKB-201ENST00000406938 NATD1Q8N6N6 113 aa19.26■□□□□ 0.67
CHKB-201ENST00000406938 TANKQ92844 425 aa19.26■□□□□ 0.67
CHKB-201ENST00000406938 ROPN1LQ96C74 230 aa19.26■□□□□ 0.67
CHKB-201ENST00000406938 CCDC115Q96NT0 180 aa19.26■□□□□ 0.67
CHKB-201ENST00000406938 OR1F2PQ96R84 312 aa19.26■□□□□ 0.67
CHKB-201ENST00000406938 SLC39A3Q9BRY0 314 aa19.26■□□□□ 0.67
CHKB-201ENST00000406938 ZPBPQ9BS86 351 aa19.26■□□□□ 0.67
CHKB-201ENST00000406938 ASPSCR1Q9BZE9 553 aa19.26■□□□□ 0.67
CHKB-201ENST00000406938 GIMAP4Q9NUV9 329 aa19.26■□□□□ 0.67
CHKB-201ENST00000406938 CTSFQ9UBX1 484 aa19.26■□□□□ 0.67
CHKB-201ENST00000406938 BTNL2Q9UIR0 455 aa19.26■□□□□ 0.67
CHKB-201ENST00000406938 FER1L5A0AVI2 2057 aa19.26■□□□□ 0.67
CHKB-201ENST00000406938 A0A1W2PRB8 838 aa19.25■□□□□ 0.67
CHKB-201ENST00000406938 BLACEA4D250 179 aa19.25■□□□□ 0.67
CHKB-201ENST00000406938 MEN1O00255 615 aa19.25■□□□□ 0.67
CHKB-201ENST00000406938 RFXANKO14593 260 aa19.25■□□□□ 0.67
CHKB-201ENST00000406938 B4GALT2O60909 372 aa19.25■□□□□ 0.67
CHKB-201ENST00000406938 KCNH1O95259 989 aa19.25■□□□□ 0.67
CHKB-201ENST00000406938 C6orf47O95873 294 aa19.25■□□□□ 0.67
CHKB-201ENST00000406938 PTPN4P29074 926 aa19.25■□□□□ 0.67
CHKB-201ENST00000406938 DMTNQ08495 405 aa19.25■□□□□ 0.67
CHKB-201ENST00000406938 HACD2Q6Y1H2 254 aa19.25■□□□□ 0.67
CHKB-201ENST00000406938 MARCH9Q86YJ5 346 aa19.25■□□□□ 0.67
CHKB-201ENST00000406938 ZC3H7AQ8IWR0 971 aaKnown RBP19.25■□□□□ 0.67
CHKB-201ENST00000406938 ZNF595Q8IYB9 648 aa19.25■□□□□ 0.67
CHKB-201ENST00000406938 OR4K14Q8NGD5 310 aa19.25■□□□□ 0.67
CHKB-201ENST00000406938 ADAMTS14Q8WXS8 1223 aa19.25■□□□□ 0.67
CHKB-201ENST00000406938 ZBED6CLQ96FA7 236 aaPredicted RBP19.25■□□□□ 0.67
CHKB-201ENST00000406938 PANX1Q96RD7 426 aa19.25■□□□□ 0.67
CHKB-201ENST00000406938 BBS4Q96RK4 519 aa19.25■□□□□ 0.67
CHKB-201ENST00000406938 C1orf21Q9H246 121 aa19.25■□□□□ 0.67
CHKB-201ENST00000406938 LRMDAQ9H2I8 198 aa19.25■□□□□ 0.67
CHKB-201ENST00000406938 MKKSQ9NPJ1 570 aaPredicted RBP19.25■□□□□ 0.67
CHKB-201ENST00000406938 LANCL2Q9NS86 450 aa19.25■□□□□ 0.67
CHKB-201ENST00000406938 ZNF780BQ9Y6R6 833 aa19.25■□□□□ 0.67
CHKB-201ENST00000406938 CPSF4O95639 269 aaKnown RBP19.25■□□□□ 0.67
CHKB-201ENST00000406938 FEN1P39748 380 aaKnown RBP19.25■□□□□ 0.67
CHKB-201ENST00000406938 ID2Q02363 134 aa19.25■□□□□ 0.67
CHKB-201ENST00000406938 DUSP2Q05923 314 aa19.25■□□□□ 0.67
CHKB-201ENST00000406938 LRRC74AQ0VAA2 488 aa19.25■□□□□ 0.67
CHKB-201ENST00000406938 CAPRIN1Q14444 709 aaKnown RBP19.25■□□□□ 0.67
CHKB-201ENST00000406938 CEBPEQ15744 281 aa19.25■□□□□ 0.67
CHKB-201ENST00000406938 DLEU7Q6UYE1 221 aa19.25■□□□□ 0.67
CHKB-201ENST00000406938 OR4A15Q8NGL6 344 aa19.25■□□□□ 0.67
CHKB-201ENST00000406938 ZNF681Q96N22 645 aa19.25■□□□□ 0.67
CHKB-201ENST00000406938 LRFN5Q96NI6 719 aa19.25■□□□□ 0.67
CHKB-201ENST00000406938 BTBD10Q9BSF8 475 aa19.25■□□□□ 0.67
CHKB-201ENST00000406938 PAIP1Q9H074 479 aaKnown RBP19.25■□□□□ 0.67
CHKB-201ENST00000406938 SLC6A13Q9NSD5 602 aa19.25■□□□□ 0.67
CHKB-201ENST00000406938 ACSS1Q9NUB1 689 aaPredicted RBP19.25■□□□□ 0.67
CHKB-201ENST00000406938 GID8Q9NWU2 228 aa19.25■□□□□ 0.67
CHKB-201ENST00000406938 DLL3Q9NYJ7 618 aa19.25■□□□□ 0.67
CHKB-201ENST00000406938 ZNF282Q9UDV7 671 aaPredicted RBP19.25■□□□□ 0.67
CHKB-201ENST00000406938 ERVK-11Q9UQG0 969 aa19.25■□□□□ 0.67
CHKB-201ENST00000406938 PCDHGA3Q9Y5H0 932 aa19.25■□□□□ 0.67
CHKB-201ENST00000406938 CFAP54Q96N23 3096 aa19.25■□□□□ 0.67
CHKB-201ENST00000406938 A0A096LPI6 279 aa19.24■□□□□ 0.67
CHKB-201ENST00000406938 MYO1GB0I1T2 1018 aa19.24■□□□□ 0.67
CHKB-201ENST00000406938 C9orf172C9J069 976 aa19.24■□□□□ 0.67
CHKB-201ENST00000406938 CLDN4O14493 209 aa19.24■□□□□ 0.67
CHKB-201ENST00000406938 GYG2O15488 501 aa19.24■□□□□ 0.67
CHKB-201ENST00000406938 BMP10O95393 424 aa19.24■□□□□ 0.67
CHKB-201ENST00000406938 ONECUT2O95948 504 aa19.24■□□□□ 0.67
CHKB-201ENST00000406938 ABCB1P08183 1280 aaPredicted RBP19.24■□□□□ 0.67
CHKB-201ENST00000406938 PPP2R1BP30154 601 aa19.24■□□□□ 0.67
CHKB-201ENST00000406938 NCBP2P52298 156 aaKnown RBP eCLIP19.24■□□□□ 0.672e-12■■■■■ 41
CHKB-201ENST00000406938 MANFP55145 182 aaKnown RBP19.24■□□□□ 0.67
CHKB-201ENST00000406938 HBA1P69905 142 aa19.24■□□□□ 0.67
CHKB-201ENST00000406938 HSPB3Q12988 150 aa19.24■□□□□ 0.67
CHKB-201ENST00000406938 SLC13A2Q13183 592 aa19.24■□□□□ 0.67
CHKB-201ENST00000406938 GTDC1Q4AE62 458 aa19.24■□□□□ 0.67
CHKB-201ENST00000406938 VWA2Q5GFL6 755 aa19.24■□□□□ 0.67
CHKB-201ENST00000406938 LRIF1Q5T3J3 769 aa19.24■□□□□ 0.67
CHKB-201ENST00000406938 ZNF551Q7Z340 670 aaPredicted RBP19.24■□□□□ 0.67
CHKB-201ENST00000406938 SUN3Q8TAQ9 357 aa19.24■□□□□ 0.67
CHKB-201ENST00000406938 ANKRD9Q96BM1 317 aaPredicted RBP19.24■□□□□ 0.67
CHKB-201ENST00000406938 LRRC58Q96CX6 371 aa19.24■□□□□ 0.67
CHKB-201ENST00000406938 AMDHD1Q96NU7 426 aa19.24■□□□□ 0.67
CHKB-201ENST00000406938 GLIPR2Q9H4G4 154 aa19.24■□□□□ 0.67
CHKB-201ENST00000406938 PRTFDC1Q9NRG1 225 aa19.24■□□□□ 0.67
CHKB-201ENST00000406938 NDE1Q9NXR1 346 aa19.24■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms