RNA–Protein interactions for RNA: ENST00000406019.1

HMGB1P13-201, Transcript of high mobility group box 1 pseudogene 13, humanhuman

BASIC

Gene HMGB1P13, Length 642 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P13-201ENST00000406019 FICDQ9BVA6 458 aa4.29□□□□□ -1.72
HMGB1P13-201ENST00000406019 TDRD1Q9BXT4 1180 aaKnown RBP4.29□□□□□ -1.72
HMGB1P13-201ENST00000406019 ACTR8Q9H981 624 aa4.29□□□□□ -1.72
HMGB1P13-201ENST00000406019 VAT1LQ9HCJ6 419 aa4.29□□□□□ -1.72
HMGB1P13-201ENST00000406019 MAN2C1Q9NTJ4 1040 aa4.29□□□□□ -1.72
HMGB1P13-201ENST00000406019 DCAF16Q9NXF7 216 aa4.29□□□□□ -1.72
HMGB1P13-201ENST00000406019 AATFQ9NY61 560 aaKnown RBP eCLIP4.29□□□□□ -1.72
HMGB1P13-201ENST00000406019 MRTO4Q9UKD2 239 aaKnown RBP4.29□□□□□ -1.72
HMGB1P13-201ENST00000406019 POMT2Q9UKY4 750 aa4.29□□□□□ -1.72
HMGB1P13-201ENST00000406019 DIMT1Q9UNQ2 313 aaKnown RBP4.29□□□□□ -1.72
HMGB1P13-201ENST00000406019 MFHAS1Q9Y4C4 1052 aa4.29□□□□□ -1.72
HMGB1P13-201ENST00000406019 GIMAP1-GIMAP5A0A087WTJ2 511 aa4.28□□□□□ -1.72
HMGB1P13-201ENST00000406019 SYNJ2BP-COX16A0A087WUM0 186 aa4.28□□□□□ -1.72
HMGB1P13-201ENST00000406019 A0A0U1RQV5 110 aa4.28□□□□□ -1.72
HMGB1P13-201ENST00000406019 A0A1B0GUL7 405 aa4.28□□□□□ -1.72
HMGB1P13-201ENST00000406019 FAM230AA0A1W2PPH8 454 aa4.28□□□□□ -1.72
HMGB1P13-201ENST00000406019 ERVV-2B6SEH9 535 aa4.28□□□□□ -1.72
HMGB1P13-201ENST00000406019 LINC01565O15544 149 aa4.28□□□□□ -1.72
HMGB1P13-201ENST00000406019 ECE2O60344 883 aa4.28□□□□□ -1.72
HMGB1P13-201ENST00000406019 LMX1BO60663 402 aa4.28□□□□□ -1.72
HMGB1P13-201ENST00000406019 VPS26AO75436 327 aa4.28□□□□□ -1.72
HMGB1P13-201ENST00000406019 EML2O95834 649 aa4.28□□□□□ -1.72
HMGB1P13-201ENST00000406019 CLPTM1O96005 669 aa4.28□□□□□ -1.72
HMGB1P13-201ENST00000406019 HIST1H2AGP0C0S8 130 aaPredicted RBP4.28□□□□□ -1.72
HMGB1P13-201ENST00000406019 KRT13P13646 458 aa4.28□□□□□ -1.72
HMGB1P13-201ENST00000406019 AADACP22760 399 aa4.28□□□□□ -1.72
HMGB1P13-201ENST00000406019 CYP2F1P24903 491 aa4.28□□□□□ -1.72
HMGB1P13-201ENST00000406019 HLA-FP30511 346 aa4.28□□□□□ -1.72
HMGB1P13-201ENST00000406019 TIMP3P35625 211 aa4.28□□□□□ -1.72
HMGB1P13-201ENST00000406019 ANP32AP39687 249 aaKnown RBP4.28□□□□□ -1.72
HMGB1P13-201ENST00000406019 LIMK2P53671 638 aa4.28□□□□□ -1.72
HMGB1P13-201ENST00000406019 CSNK2BP67870 215 aa4.28□□□□□ -1.72
HMGB1P13-201ENST00000406019 HSF2Q03933 536 aa4.28□□□□□ -1.72
HMGB1P13-201ENST00000406019 OVGP1Q12889 678 aa4.28□□□□□ -1.72
HMGB1P13-201ENST00000406019 LIPJQ5W064 366 aa4.28□□□□□ -1.72
HMGB1P13-201ENST00000406019 CCDC73Q6ZRK6 1079 aa4.28□□□□□ -1.72
HMGB1P13-201ENST00000406019 RFPL4BQ6ZWI9 263 aa4.28□□□□□ -1.72
HMGB1P13-201ENST00000406019 HIST2H2ABQ8IUE6 130 aaPredicted RBP4.28□□□□□ -1.72
HMGB1P13-201ENST00000406019 BANPQ8N9N5 519 aa4.28□□□□□ -1.72
HMGB1P13-201ENST00000406019 ADAD2Q8NCV1 583 aaKnown RBP4.28□□□□□ -1.72
HMGB1P13-201ENST00000406019 OR2T34Q8NGX1 318 aa4.28□□□□□ -1.72
HMGB1P13-201ENST00000406019 C8orf46Q8TAG6 207 aa4.28□□□□□ -1.72
HMGB1P13-201ENST00000406019 ZNRF4Q8WWF5 429 aa4.28□□□□□ -1.72
HMGB1P13-201ENST00000406019 SLC5A11Q8WWX8 675 aa4.28□□□□□ -1.72
HMGB1P13-201ENST00000406019 TM9SF4Q92544 642 aa4.28□□□□□ -1.72
HMGB1P13-201ENST00000406019 FCGR1BQ92637 280 aa4.28□□□□□ -1.72
HMGB1P13-201ENST00000406019 HIST1H2ACQ93077 130 aa4.28□□□□□ -1.72
HMGB1P13-201ENST00000406019 CCDC51Q96ER9 411 aa4.28□□□□□ -1.72
HMGB1P13-201ENST00000406019 GIMAP5Q96F15 307 aa4.28□□□□□ -1.72
HMGB1P13-201ENST00000406019 WWP1Q9H0M0 922 aa4.28□□□□□ -1.72
HMGB1P13-201ENST00000406019 VPS33BQ9H267 617 aa4.28□□□□□ -1.72
HMGB1P13-201ENST00000406019 HOXC10Q9NYD6 342 aa4.28□□□□□ -1.72
HMGB1P13-201ENST00000406019 ATG4BQ9Y4P1 393 aa4.28□□□□□ -1.72
HMGB1P13-201ENST00000406019 ABCC4O15439 1325 aa4.27□□□□□ -1.73
HMGB1P13-201ENST00000406019 CUX2O14529 1486 aa4.27□□□□□ -1.73
HMGB1P13-201ENST00000406019 SH3PXD2BA1X283 911 aa4.27□□□□□ -1.73
HMGB1P13-201ENST00000406019 TRIM49BA6NDI0 452 aa4.27□□□□□ -1.73
HMGB1P13-201ENST00000406019 PRR23AA6NEV1 266 aa4.27□□□□□ -1.73
HMGB1P13-201ENST00000406019 YJEFN3A6XGL0 299 aa4.27□□□□□ -1.73
HMGB1P13-201ENST00000406019 P2RY10O00398 339 aa4.27□□□□□ -1.73
HMGB1P13-201ENST00000406019 CIDEAO60543 219 aa4.27□□□□□ -1.73
HMGB1P13-201ENST00000406019 CSO75390 466 aaKnown RBP4.27□□□□□ -1.73
HMGB1P13-201ENST00000406019 KHDRBS3O75525 346 aaKnown RBP4.27□□□□□ -1.73
HMGB1P13-201ENST00000406019 CSDE1O75534 798 aaKnown RBP4.27□□□□□ -1.73
HMGB1P13-201ENST00000406019 SPAG6O75602 509 aa4.27□□□□□ -1.73
HMGB1P13-201ENST00000406019 TOM1L1O75674 476 aa4.27□□□□□ -1.73
HMGB1P13-201ENST00000406019 FGF19O95750 216 aa4.27□□□□□ -1.73
HMGB1P13-201ENST00000406019 TPM2P07951 284 aa4.27□□□□□ -1.73
HMGB1P13-201ENST00000406019 RPL35AP18077 110 aaKnown RBP4.27□□□□□ -1.73
HMGB1P13-201ENST00000406019 LBX1P52954 281 aa4.27□□□□□ -1.73
HMGB1P13-201ENST00000406019 TMEM132DQ14C87 1099 aa4.27□□□□□ -1.73
HMGB1P13-201ENST00000406019 C3AR1Q16581 482 aa4.27□□□□□ -1.73
HMGB1P13-201ENST00000406019 ADPRMQ3LIE5 342 aa4.27□□□□□ -1.73
HMGB1P13-201ENST00000406019 KIAA1644Q3SXP7 199 aa4.27□□□□□ -1.73
HMGB1P13-201ENST00000406019 FAM106AQ4KMX7 169 aa4.27□□□□□ -1.73
HMGB1P13-201ENST00000406019 SPANXN4Q5MJ08 99 aa4.27□□□□□ -1.73
HMGB1P13-201ENST00000406019 LCE1EQ5T753 118 aa4.27□□□□□ -1.73
HMGB1P13-201ENST00000406019 ATP1A1-AS1Q5TC04 95 aa4.27□□□□□ -1.73
HMGB1P13-201ENST00000406019 CDC42EP5Q6NZY7 148 aa4.27□□□□□ -1.73
HMGB1P13-201ENST00000406019 WDR49Q8IV35 697 aa4.27□□□□□ -1.73
HMGB1P13-201ENST00000406019 MISPQ8IVT2 679 aa4.27□□□□□ -1.73
HMGB1P13-201ENST00000406019 DND1Q8IYX4 353 aaKnown RBP4.27□□□□□ -1.73
HMGB1P13-201ENST00000406019 ELMOD1Q8N336 334 aa4.27□□□□□ -1.73
HMGB1P13-201ENST00000406019 STPG4Q8N801 248 aa4.27□□□□□ -1.73
HMGB1P13-201ENST00000406019 FAM133AQ8N9E0 248 aa4.27□□□□□ -1.73
HMGB1P13-201ENST00000406019 FADS6Q8N9I5 356 aa4.27□□□□□ -1.73
HMGB1P13-201ENST00000406019 CCDC197Q8NCU1 140 aa4.27□□□□□ -1.73
HMGB1P13-201ENST00000406019 GPR148Q8TDV2 347 aa4.27□□□□□ -1.73
HMGB1P13-201ENST00000406019 PHYHIPQ92561 330 aa4.27□□□□□ -1.73
HMGB1P13-201ENST00000406019 THRSPQ92748 146 aa4.27□□□□□ -1.73
HMGB1P13-201ENST00000406019 N4BP2L2Q92802 583 aaPredicted RBP4.27□□□□□ -1.73
HMGB1P13-201ENST00000406019 OMA1Q96E52 524 aa4.27□□□□□ -1.73
HMGB1P13-201ENST00000406019 ZNF396Q96N95 335 aaPredicted RBP4.27□□□□□ -1.73
HMGB1P13-201ENST00000406019 NKX3-1Q99801 234 aaPredicted RBP4.27□□□□□ -1.73
HMGB1P13-201ENST00000406019 TPPP3Q9BW30 176 aa4.27□□□□□ -1.73
HMGB1P13-201ENST00000406019 ZNF416Q9BWM5 594 aa4.27□□□□□ -1.73
HMGB1P13-201ENST00000406019 MRPL13Q9BYD1 178 aaKnown RBP4.27□□□□□ -1.73
HMGB1P13-201ENST00000406019 S100A14Q9HCY8 104 aa4.27□□□□□ -1.73
HMGB1P13-201ENST00000406019 YAE1D1Q9NRH1 226 aa4.27□□□□□ -1.73
HMGB1P13-201ENST00000406019 RABL2AQ9UBK7 228 aaPredicted RBP4.27□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms