RNA–Protein interactions for RNA: ENST00000405655.7

PRAME-205, Transcript of preferentially expressed antigen in melanoma, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PRAME, Length 2,179 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAME-205ENST00000405655 SIM1P81133 766 aaPredicted RBP13.3□□□□□ -0.28
PRAME-205ENST00000405655 PPP2R2BQ00005 443 aa13.3□□□□□ -0.28
PRAME-205ENST00000405655 PIGFQ07326 219 aa13.3□□□□□ -0.28
PRAME-205ENST00000405655 SAXO2Q658L1 398 aa13.3□□□□□ -0.28
PRAME-205ENST00000405655 MRM1Q6IN84 353 aaKnown RBP13.3□□□□□ -0.28
PRAME-205ENST00000405655 TRIM40Q6P9F5 258 aa13.3□□□□□ -0.28
PRAME-205ENST00000405655 Q6ZPB1 254 aaPredicted RBP13.3□□□□□ -0.28
PRAME-205ENST00000405655 ASPGQ86U10 573 aa13.3□□□□□ -0.28
PRAME-205ENST00000405655 RBM45Q8IUH3 476 aaKnown RBP13.3□□□□□ -0.28
PRAME-205ENST00000405655 PACRGLQ8N7B6 248 aa13.3□□□□□ -0.28
PRAME-205ENST00000405655 KLHL6Q8WZ60 621 aa13.3□□□□□ -0.28
PRAME-205ENST00000405655 MTERF3Q96E29 417 aa13.3□□□□□ -0.28
PRAME-205ENST00000405655 KCNC2Q96PR1 638 aa13.3□□□□□ -0.28
PRAME-205ENST00000405655 UCKL1Q9NWZ5 548 aa13.3□□□□□ -0.28
PRAME-205ENST00000405655 AP3M1Q9Y2T2 418 aa13.3□□□□□ -0.28
PRAME-205ENST00000405655 SH3GLB1Q9Y371 365 aa13.3□□□□□ -0.28
PRAME-205ENST00000405655 OR2W5A6NFC9 320 aa13.3□□□□□ -0.28
PRAME-205ENST00000405655 CHURC1-FNTBB4DL54 471 aa13.3□□□□□ -0.28
PRAME-205ENST00000405655 H0YGG7 62 aa13.3□□□□□ -0.28
PRAME-205ENST00000405655 HMGN4O00479 90 aa13.3□□□□□ -0.28
PRAME-205ENST00000405655 SUV39H1O43463 412 aa13.3□□□□□ -0.28
PRAME-205ENST00000405655 ST6GAL1P15907 406 aa13.3□□□□□ -0.28
PRAME-205ENST00000405655 MYF6P23409 242 aa13.3□□□□□ -0.28
PRAME-205ENST00000405655 GPC1P35052 558 aa13.3□□□□□ -0.28
PRAME-205ENST00000405655 AHRP35869 848 aa13.3□□□□□ -0.28
PRAME-205ENST00000405655 GSSP48637 474 aa13.3□□□□□ -0.28
PRAME-205ENST00000405655 CSNK1EP49674 416 aaKnown RBP13.3□□□□□ -0.28
PRAME-205ENST00000405655 DSTNP60981 165 aa13.3□□□□□ -0.28
PRAME-205ENST00000405655 ARF3P61204 181 aaPredicted RBP13.3□□□□□ -0.28
PRAME-205ENST00000405655 RPL6Q02878 288 aaKnown RBP13.3□□□□□ -0.28
PRAME-205ENST00000405655 HHEXQ03014 270 aa13.3□□□□□ -0.28
PRAME-205ENST00000405655 KCNAB2Q13303 367 aa13.3□□□□□ -0.28
PRAME-205ENST00000405655 VEZF1Q14119 521 aa13.3□□□□□ -0.28
PRAME-205ENST00000405655 GANABQ14697 944 aaKnown RBP13.3□□□□□ -0.28
PRAME-205ENST00000405655 NADK2Q4G0N4 442 aa13.3□□□□□ -0.28
PRAME-205ENST00000405655 OR2T5Q6IEZ7 315 aa13.3□□□□□ -0.28
PRAME-205ENST00000405655 ERICH5Q6P6B1 374 aa13.3□□□□□ -0.28
PRAME-205ENST00000405655 TRIML2Q8N7C3 387 aa13.3□□□□□ -0.28
PRAME-205ENST00000405655 TMEM52Q8NDY8 209 aa13.3□□□□□ -0.28
PRAME-205ENST00000405655 OR9A2Q8NGT5 310 aa13.3□□□□□ -0.28
PRAME-205ENST00000405655 OR2T29Q8NH02 315 aa13.3□□□□□ -0.28
PRAME-205ENST00000405655 LMX1AQ8TE12 382 aa13.3□□□□□ -0.28
PRAME-205ENST00000405655 OR5P2Q8WZ92 322 aa13.3□□□□□ -0.28
PRAME-205ENST00000405655 UBE2FQ969M7 185 aa13.3□□□□□ -0.28
PRAME-205ENST00000405655 COL26A1Q96A83 441 aa13.3□□□□□ -0.28
PRAME-205ENST00000405655 HSPA12BQ96MM6 686 aa13.3□□□□□ -0.28
PRAME-205ENST00000405655 BBS4Q96RK4 519 aa13.3□□□□□ -0.28
PRAME-205ENST00000405655 QRSL1Q9H0R6 528 aaKnown RBP13.3□□□□□ -0.28
PRAME-205ENST00000405655 MAGIXQ9H6Y5 334 aa13.3□□□□□ -0.28
PRAME-205ENST00000405655 PDP2Q9P2J9 529 aa13.3□□□□□ -0.28
PRAME-205ENST00000405655 CES1P1Q9UKY3 287 aa13.3□□□□□ -0.28
PRAME-205ENST00000405655 SEC16AO15027 2179 aa13.29□□□□□ -0.28
PRAME-205ENST00000405655 PI4KAP42356 2102 aa13.29□□□□□ -0.28
PRAME-205ENST00000405655 A0A1W2PPC1 479 aa13.29□□□□□ -0.28
PRAME-205ENST00000405655 PROM1O43490 865 aa13.29□□□□□ -0.28
PRAME-205ENST00000405655 NDUFS2O75306 463 aa13.29□□□□□ -0.28
PRAME-205ENST00000405655 TNFAIP8O95379 198 aa13.29□□□□□ -0.28
PRAME-205ENST00000405655 FRKP42685 505 aaPredicted RBP13.29□□□□□ -0.28
PRAME-205ENST00000405655 RNF144AP50876 292 aaPredicted RBP13.29□□□□□ -0.28
PRAME-205ENST00000405655 SIM2Q14190 667 aaPredicted RBP13.29□□□□□ -0.28
PRAME-205ENST00000405655 DEFB133Q30KQ1 61 aa13.29□□□□□ -0.28
PRAME-205ENST00000405655 OR5K1Q8NHB7 308 aa13.29□□□□□ -0.28
PRAME-205ENST00000405655 XAGE5Q8WWM1 108 aa13.29□□□□□ -0.28
PRAME-205ENST00000405655 TMEM19Q96HH6 336 aa13.29□□□□□ -0.28
PRAME-205ENST00000405655 GSDMCQ9BYG8 508 aa13.29□□□□□ -0.28
PRAME-205ENST00000405655 RUBCNLQ9H714 662 aa13.29□□□□□ -0.28
PRAME-205ENST00000405655 ZNF696Q9H7X3 374 aa13.29□□□□□ -0.28
PRAME-205ENST00000405655 GPR27Q9NS67 375 aa13.29□□□□□ -0.28
PRAME-205ENST00000405655 RLIMQ9NVW2 624 aa13.29□□□□□ -0.28
PRAME-205ENST00000405655 FAM118AQ9NWS6 357 aa13.29□□□□□ -0.28
PRAME-205ENST00000405655 PDP1Q9P0J1 537 aaPredicted RBP13.29□□□□□ -0.28
PRAME-205ENST00000405655 ANKMY1Q9P2S6 941 aa13.29□□□□□ -0.28
PRAME-205ENST00000405655 TRPC4Q9UBN4 977 aa13.29□□□□□ -0.28
PRAME-205ENST00000405655 PILRAQ9UKJ1 303 aa13.29□□□□□ -0.28
PRAME-205ENST00000405655 SAMHD1Q9Y3Z3 626 aaKnown RBP13.29□□□□□ -0.28
PRAME-205ENST00000405655 MED26O95402 600 aa13.28□□□□□ -0.28
PRAME-205ENST00000405655 CLPTM1O96005 669 aa13.28□□□□□ -0.28
PRAME-205ENST00000405655 PDGFBP01127 241 aaPredicted RBP13.28□□□□□ -0.28
PRAME-205ENST00000405655 ALBP02768 609 aa13.28□□□□□ -0.28
PRAME-205ENST00000405655 ARAFP10398 606 aa13.28□□□□□ -0.28
PRAME-205ENST00000405655 NDUFS1P28331 727 aa13.28□□□□□ -0.28
PRAME-205ENST00000405655 RRM2P31350 389 aa13.28□□□□□ -0.28
PRAME-205ENST00000405655 RPL3P39023 403 aaKnown RBP13.28□□□□□ -0.28
PRAME-205ENST00000405655 VSX2P58304 361 aaPredicted RBP13.28□□□□□ -0.28
PRAME-205ENST00000405655 SELENOWP63302 87 aa13.28□□□□□ -0.28
PRAME-205ENST00000405655 APOFQ13790 326 aa13.28□□□□□ -0.28
PRAME-205ENST00000405655 CTU2Q2VPK5 515 aaKnown RBP13.28□□□□□ -0.28
PRAME-205ENST00000405655 LEXMQ3ZCV2 418 aa13.28□□□□□ -0.28
PRAME-205ENST00000405655 LIN52Q52LA3 116 aa13.28□□□□□ -0.28
PRAME-205ENST00000405655 NKAIN2Q5VXU1 208 aa13.28□□□□□ -0.28
PRAME-205ENST00000405655 TTC33Q6PID6 262 aaPredicted RBP13.28□□□□□ -0.28
PRAME-205ENST00000405655 DCP2Q8IU60 420 aaKnown RBP13.28□□□□□ -0.28
PRAME-205ENST00000405655 ADHFE1Q8IWW8 467 aa13.28□□□□□ -0.28
PRAME-205ENST00000405655 OR4D11Q8NGI4 311 aa13.28□□□□□ -0.28
PRAME-205ENST00000405655 NEURL3Q96EH8 262 aa13.28□□□□□ -0.28
PRAME-205ENST00000405655 MSANTD3Q96H12 275 aa13.28□□□□□ -0.28
PRAME-205ENST00000405655 QRFPRQ96P65 431 aa13.28□□□□□ -0.28
PRAME-205ENST00000405655 DOHHQ9BU89 302 aa13.28□□□□□ -0.28
PRAME-205ENST00000405655 RBCK1Q9BYM8 510 aa13.28□□□□□ -0.28
PRAME-205ENST00000405655 PITHD1Q9GZP4 211 aaPredicted RBP13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms