RNA–Protein interactions for RNA: ENST00000403971.2

HMGB3P19-201, Transcript of high mobility group box 3 pseudogene 19, humanhuman

BASIC

Gene HMGB3P19, Length 560 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P19-201ENST00000403971 TOM1L1O75674 476 aa4.4□□□□□ -1.71
HMGB3P19-201ENST00000403971 DFFBO76075 338 aa4.4□□□□□ -1.71
HMGB3P19-201ENST00000403971 MOCS3O95396 460 aa4.4□□□□□ -1.71
HMGB3P19-201ENST00000403971 VTNP04004 478 aa4.4□□□□□ -1.71
HMGB3P19-201ENST00000403971 TPM3P06753 285 aa4.4□□□□□ -1.71
HMGB3P19-201ENST00000403971 FAM157CP0CG43 387 aa4.4□□□□□ -1.71
HMGB3P19-201ENST00000403971 LHCGRP22888 699 aa4.4□□□□□ -1.71
HMGB3P19-201ENST00000403971 PSMA3P25788 255 aa4.4□□□□□ -1.71
HMGB3P19-201ENST00000403971 AXLP30530 894 aa4.4□□□□□ -1.71
HMGB3P19-201ENST00000403971 HSD17B3P37058 310 aa4.4□□□□□ -1.71
HMGB3P19-201ENST00000403971 RGS7P49802 495 aa4.4□□□□□ -1.71
HMGB3P19-201ENST00000403971 STX17P56962 302 aa4.4□□□□□ -1.71
HMGB3P19-201ENST00000403971 NLRP11P59045 1033 aaKnown RBP4.4□□□□□ -1.71
HMGB3P19-201ENST00000403971 MRPS6P82932 125 aaKnown RBP4.4□□□□□ -1.71
HMGB3P19-201ENST00000403971 KRTAP1-1Q07627 177 aa4.4□□□□□ -1.71
HMGB3P19-201ENST00000403971 NCBP1Q09161 790 aaKnown RBP4.4□□□□□ -1.71
HMGB3P19-201ENST00000403971 TUBB2AQ13885 445 aa4.4□□□□□ -1.71
HMGB3P19-201ENST00000403971 TAZQ16635 292 aa4.4□□□□□ -1.71
HMGB3P19-201ENST00000403971 KYAT1Q16773 422 aa4.4□□□□□ -1.71
HMGB3P19-201ENST00000403971 ZNF876PQ49A33 203 aa4.4□□□□□ -1.71
HMGB3P19-201ENST00000403971 OR4A47Q6IF82 309 aa4.4□□□□□ -1.71
HMGB3P19-201ENST00000403971 TMEM182Q6ZP80 229 aaPredicted RBP4.4□□□□□ -1.71
HMGB3P19-201ENST00000403971 APTXQ7Z2E3 356 aaKnown RBP4.4□□□□□ -1.71
HMGB3P19-201ENST00000403971 ANKRD33Q7Z3H0 272 aa4.4□□□□□ -1.71
HMGB3P19-201ENST00000403971 NRARPQ7Z6K4 114 aa4.4□□□□□ -1.71
HMGB3P19-201ENST00000403971 NELFCDQ8IXH7 590 aa4.4□□□□□ -1.71
HMGB3P19-201ENST00000403971 KIRREL3Q8IZU9 778 aa4.4□□□□□ -1.71
HMGB3P19-201ENST00000403971 RYBPQ8N488 228 aaPredicted RBP4.4□□□□□ -1.71
HMGB3P19-201ENST00000403971 OR13C3Q8NGS6 347 aa4.4□□□□□ -1.71
HMGB3P19-201ENST00000403971 DNAJB3Q8WWF6 145 aa4.4□□□□□ -1.71
HMGB3P19-201ENST00000403971 FBXO17Q96EF6 278 aa4.4□□□□□ -1.71
HMGB3P19-201ENST00000403971 CCDC51Q96ER9 411 aa4.4□□□□□ -1.71
HMGB3P19-201ENST00000403971 GIMAP5Q96F15 307 aa4.4□□□□□ -1.71
HMGB3P19-201ENST00000403971 CITED2Q99967 270 aaPredicted RBP4.4□□□□□ -1.71
HMGB3P19-201ENST00000403971 TUBB2BQ9BVA1 445 aa4.4□□□□□ -1.71
HMGB3P19-201ENST00000403971 GCOM2Q9BZD3 368 aaPredicted RBP4.4□□□□□ -1.71
HMGB3P19-201ENST00000403971 SNX25Q9H3E2 840 aa4.4□□□□□ -1.71
HMGB3P19-201ENST00000403971 ZNF696Q9H7X3 374 aa4.4□□□□□ -1.71
HMGB3P19-201ENST00000403971 RAB9BQ9NP90 201 aa4.4□□□□□ -1.71
HMGB3P19-201ENST00000403971 AGPAT3Q9NRZ7 376 aa4.4□□□□□ -1.71
HMGB3P19-201ENST00000403971 SAMSN1Q9NSI8 373 aaKnown RBP4.4□□□□□ -1.71
HMGB3P19-201ENST00000403971 INTS10Q9NVR2 710 aaKnown RBP4.4□□□□□ -1.71
HMGB3P19-201ENST00000403971 DNAJB9Q9UBS3 223 aa4.4□□□□□ -1.71
HMGB3P19-201ENST00000403971 KCNK7Q9Y2U2 307 aa4.4□□□□□ -1.71
HMGB3P19-201ENST00000403971 R4GN57 208 aa4.4□□□□□ -1.71
HMGB3P19-201ENST00000403971 MYH10P35580 1976 aa4.4□□□□□ -1.71
HMGB3P19-201ENST00000403971 KIF26BQ2KJY2 2108 aa4.39□□□□□ -1.71
HMGB3P19-201ENST00000403971 A0A1B0GUA9 196 aa4.39□□□□□ -1.71
HMGB3P19-201ENST00000403971 ANKRD63C9JTQ0 380 aa4.39□□□□□ -1.71
HMGB3P19-201ENST00000403971 M0QZ92 97 aa4.39□□□□□ -1.71
HMGB3P19-201ENST00000403971 OGTO15294 1046 aa4.39□□□□□ -1.71
HMGB3P19-201ENST00000403971 CLDN3O15551 220 aa4.39□□□□□ -1.71
HMGB3P19-201ENST00000403971 EXTL3O43909 919 aa4.39□□□□□ -1.71
HMGB3P19-201ENST00000403971 CDC123O75794 336 aaPredicted RBP4.39□□□□□ -1.71
HMGB3P19-201ENST00000403971 ERLIN2O94905 339 aa4.39□□□□□ -1.71
HMGB3P19-201ENST00000403971 SERPING1P05155 500 aa4.39□□□□□ -1.71
HMGB3P19-201ENST00000403971 TPM2P07951 284 aa4.39□□□□□ -1.71
HMGB3P19-201ENST00000403971 IQCF3P0C7M6 154 aa4.39□□□□□ -1.71
HMGB3P19-201ENST00000403971 EPB41P11171 864 aaKnown RBP4.39□□□□□ -1.71
HMGB3P19-201ENST00000403971 CEACAM1P13688 526 aa4.39□□□□□ -1.71
HMGB3P19-201ENST00000403971 GNB3P16520 340 aa4.39□□□□□ -1.71
HMGB3P19-201ENST00000403971 ARF4P18085 180 aaPredicted RBP4.39□□□□□ -1.71
HMGB3P19-201ENST00000403971 TCEA1P23193 301 aaKnown RBP4.39□□□□□ -1.71
HMGB3P19-201ENST00000403971 PSMB4P28070 264 aa4.39□□□□□ -1.71
HMGB3P19-201ENST00000403971 ADSSP30520 456 aa4.39□□□□□ -1.71
HMGB3P19-201ENST00000403971 ALDH3A2P51648 485 aa4.39□□□□□ -1.71
HMGB3P19-201ENST00000403971 NAGLUP54802 743 aa4.39□□□□□ -1.71
HMGB3P19-201ENST00000403971 GNB1P62873 340 aa4.39□□□□□ -1.71
HMGB3P19-201ENST00000403971 KCNJ10P78508 379 aa4.39□□□□□ -1.71
HMGB3P19-201ENST00000403971 MGAT3Q09327 533 aa4.39□□□□□ -1.71
HMGB3P19-201ENST00000403971 ILF2Q12905 390 aaKnown RBP4.39□□□□□ -1.71
HMGB3P19-201ENST00000403971 BFSP1Q12934 665 aa4.39□□□□□ -1.71
HMGB3P19-201ENST00000403971 TNK1Q13470 666 aa4.39□□□□□ -1.71
HMGB3P19-201ENST00000403971 GPR33Q49SQ1 333 aa4.39□□□□□ -1.71
HMGB3P19-201ENST00000403971 FILIP1LQ4L180 1135 aa4.39□□□□□ -1.71
HMGB3P19-201ENST00000403971 ATF7IP2Q5U623 682 aa4.39□□□□□ -1.71
HMGB3P19-201ENST00000403971 SHEQ5VZ18 495 aa4.39□□□□□ -1.71
HMGB3P19-201ENST00000403971 UGT3A1Q6NUS8 523 aa4.39□□□□□ -1.71
HMGB3P19-201ENST00000403971 ARMCX5Q6P1M9 558 aa4.39□□□□□ -1.71
HMGB3P19-201ENST00000403971 SLC39A4Q6P5W5 647 aa4.39□□□□□ -1.71
HMGB3P19-201ENST00000403971 TMEM207Q6UWW9 146 aa4.39□□□□□ -1.71
HMGB3P19-201ENST00000403971 NDUFAF2Q8N183 169 aa4.39□□□□□ -1.71
HMGB3P19-201ENST00000403971 GPD1LQ8N335 351 aa4.39□□□□□ -1.71
HMGB3P19-201ENST00000403971 TMEM178AQ8NBL3 297 aa4.39□□□□□ -1.71
HMGB3P19-201ENST00000403971 TRAF3IP1Q8TDR0 691 aaPredicted RBP4.39□□□□□ -1.71
HMGB3P19-201ENST00000403971 ANP32BQ92688 251 aaKnown RBP4.39□□□□□ -1.71
HMGB3P19-201ENST00000403971 CORO2AQ92828 525 aa4.39□□□□□ -1.71
HMGB3P19-201ENST00000403971 MR1Q95460 341 aa4.39□□□□□ -1.71
HMGB3P19-201ENST00000403971 CNOT6LQ96LI5 555 aaKnown RBP4.39□□□□□ -1.71
HMGB3P19-201ENST00000403971 CBWD1Q9BRT8 395 aa4.39□□□□□ -1.71
HMGB3P19-201ENST00000403971 INPP5KQ9BT40 448 aa4.39□□□□□ -1.71
HMGB3P19-201ENST00000403971 FAM49AQ9H0Q0 323 aaPredicted RBP4.39□□□□□ -1.71
HMGB3P19-201ENST00000403971 ATP13A3Q9H7F0 1226 aa4.39□□□□□ -1.71
HMGB3P19-201ENST00000403971 MINDY3Q9H8M7 445 aa4.39□□□□□ -1.71
HMGB3P19-201ENST00000403971 SCRT2Q9NQ03 307 aa4.39□□□□□ -1.71
HMGB3P19-201ENST00000403971 PHPT1Q9NRX4 125 aaPredicted RBP4.39□□□□□ -1.71
HMGB3P19-201ENST00000403971 AGPAT5Q9NUQ2 364 aa4.39□□□□□ -1.71
HMGB3P19-201ENST00000403971 DDX43Q9NXZ2 648 aaKnown RBP4.39□□□□□ -1.71
HMGB3P19-201ENST00000403971 ARMCX3Q9UH62 379 aaPredicted RBP4.39□□□□□ -1.71
HMGB3P19-201ENST00000403971 GTF3C4Q9UKN8 822 aa4.39□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms