RNA–Protein interactions for RNA: ENST00000403904.5

CSNK1E-204, Transcript of casein kinase 1 epsilon, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CSNK1E, Length 1,580 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-204ENST00000403904 DMXL2Q8TDJ6 3036 aa31.27■■■□□ 2.6
CSNK1E-204ENST00000403904 MYOCOSA0A1B0GUC4 107 aa31.26■■■□□ 2.6
CSNK1E-204ENST00000403904 TGFBR3LH3BV60 316 aa31.26■■■□□ 2.6
CSNK1E-204ENST00000403904 LIFP15018 202 aa31.26■■■□□ 2.6
CSNK1E-204ENST00000403904 HPCAL1P37235 193 aa31.26■■■□□ 2.6
CSNK1E-204ENST00000403904 EMP2P54851 167 aa31.26■■■□□ 2.6
CSNK1E-204ENST00000403904 STX1BP61266 288 aa31.26■■■□□ 2.6
CSNK1E-204ENST00000403904 PRSS53Q2L4Q9 553 aa31.26■■■□□ 2.6
CSNK1E-204ENST00000403904 FAAH2Q6GMR7 532 aa31.26■■■□□ 2.6
CSNK1E-204ENST00000403904 MIER2Q8N344 545 aa31.26■■■□□ 2.6
CSNK1E-204ENST00000403904 KCNE4Q8WWG9 221 aa31.26■■■□□ 2.6
CSNK1E-204ENST00000403904 TSLPQ969D9 159 aa31.26■■■□□ 2.6
CSNK1E-204ENST00000403904 EXOSC8Q96B26 276 aaKnown RBP31.26■■■□□ 2.6
CSNK1E-204ENST00000403904 EHD3Q9NZN3 535 aa31.26■■■□□ 2.6
CSNK1E-204ENST00000403904 MMACHCQ9Y4U1 282 aa31.26■■■□□ 2.6
CSNK1E-204ENST00000403904 PCDHGA6Q9Y5G7 932 aa31.26■■■□□ 2.6
CSNK1E-204ENST00000403904 GABRR3A8MPY1 467 aa31.26■■■□□ 2.59
CSNK1E-204ENST00000403904 SCAMP2O15127 329 aaKnown RBP31.26■■■□□ 2.59
CSNK1E-204ENST00000403904 ERAL1O75616 437 aaKnown RBP31.26■■■□□ 2.59
CSNK1E-204ENST00000403904 SRSF6Q13247 344 aaKnown RBP31.26■■■□□ 2.59
CSNK1E-204ENST00000403904 OR7A2PQ8NGA2 310 aa31.26■■■□□ 2.59
CSNK1E-204ENST00000403904 KLHL29Q96CT2 875 aa31.26■■■□□ 2.59
CSNK1E-204ENST00000403904 FAM117AQ9C073 453 aa31.26■■■□□ 2.59
CSNK1E-204ENST00000403904 PSME2Q9UL46 239 aa31.26■■■□□ 2.59
CSNK1E-204ENST00000403904 CLDN16Q9Y5I7 305 aa31.26■■■□□ 2.59
CSNK1E-204ENST00000403904 APC2O95996 2303 aa31.25■■■□□ 2.59
CSNK1E-204ENST00000403904 C9JVG2 144 aa31.25■■■□□ 2.59
CSNK1E-204ENST00000403904 GPX3P22352 226 aa31.25■■■□□ 2.59
CSNK1E-204ENST00000403904 PDE7AQ13946 482 aa31.25■■■□□ 2.59
CSNK1E-204ENST00000403904 NSDHLQ15738 373 aa31.25■■■□□ 2.59
CSNK1E-204ENST00000403904 UGT8Q16880 541 aa31.25■■■□□ 2.59
CSNK1E-204ENST00000403904 GKAP1Q5VSY0 366 aaPredicted RBP31.25■■■□□ 2.59
CSNK1E-204ENST00000403904 PAOXQ6QHF9 649 aa31.25■■■□□ 2.59
CSNK1E-204ENST00000403904 PLPP5Q8NEB5 264 aa31.25■■■□□ 2.59
CSNK1E-204ENST00000403904 OR9I1Q8NGQ6 314 aa31.25■■■□□ 2.59
CSNK1E-204ENST00000403904 BCAS4Q8TDM0 211 aa31.25■■■□□ 2.59
CSNK1E-204ENST00000403904 PPCDCQ96CD2 204 aa31.25■■■□□ 2.59
CSNK1E-204ENST00000403904 ZNF385DQ9H6B1 395 aa31.25■■■□□ 2.59
CSNK1E-204ENST00000403904 SH3BP4Q9P0V3 963 aa31.25■■■□□ 2.59
CSNK1E-204ENST00000403904 A0A1W2PS29 197 aa31.24■■■□□ 2.59
CSNK1E-204ENST00000403904 SLC22A3O75751 556 aa31.24■■■□□ 2.59
CSNK1E-204ENST00000403904 GPR75O95800 540 aa31.24■■■□□ 2.59
CSNK1E-204ENST00000403904 CAPNS1P04632 268 aa31.24■■■□□ 2.59
CSNK1E-204ENST00000403904 C8orf89P0DMQ9 161 aa31.24■■■□□ 2.59
CSNK1E-204ENST00000403904 COX7A2P14406 83 aa31.24■■■□□ 2.59
CSNK1E-204ENST00000403904 PCSK2P16519 638 aa31.24■■■□□ 2.59
CSNK1E-204ENST00000403904 C21orf58P58505 322 aa31.24■■■□□ 2.59
CSNK1E-204ENST00000403904 STX4Q12846 297 aa31.24■■■□□ 2.59
CSNK1E-204ENST00000403904 SQLEQ14534 574 aa31.24■■■□□ 2.59
CSNK1E-204ENST00000403904 ZNF750Q32MQ0 723 aa31.24■■■□□ 2.59
CSNK1E-204ENST00000403904 R3HCC1LQ7Z5L2 792 aaKnown RBP31.24■■■□□ 2.59
CSNK1E-204ENST00000403904 OR4K14Q8NGD5 310 aa31.24■■■□□ 2.59
CSNK1E-204ENST00000403904 MTERF3Q96E29 417 aa31.24■■■□□ 2.59
CSNK1E-204ENST00000403904 ZIM2Q9NZV7 527 aa31.24■■■□□ 2.59
CSNK1E-204ENST00000403904 ATP6V1HQ9UI12 483 aa31.24■■■□□ 2.59
CSNK1E-204ENST00000403904 ARL2BPQ9Y2Y0 163 aa31.24■■■□□ 2.59
CSNK1E-204ENST00000403904 C1QTNF9BB2RNN3 333 aa31.23■■■□□ 2.59
CSNK1E-204ENST00000403904 C1QTNF9P0C862 333 aa31.23■■■□□ 2.59
CSNK1E-204ENST00000403904 PIK3R1P27986 724 aa31.23■■■□□ 2.59
CSNK1E-204ENST00000403904 IL12AP29459 219 aa31.23■■■□□ 2.59
CSNK1E-204ENST00000403904 PPP2R1BP30154 601 aa31.23■■■□□ 2.59
CSNK1E-204ENST00000403904 ATP4BP51164 291 aa31.23■■■□□ 2.59
CSNK1E-204ENST00000403904 ZNF385BQ569K4 471 aa31.23■■■□□ 2.59
CSNK1E-204ENST00000403904 MESP1Q9BRJ9 268 aa31.23■■■□□ 2.59
CSNK1E-204ENST00000403904 IGKV3D-11A0A0A0MRZ8 115 aa31.22■■■□□ 2.59
CSNK1E-204ENST00000403904 NDUFAB1O14561 156 aa31.22■■■□□ 2.59
CSNK1E-204ENST00000403904 ALOX12BO75342 701 aa31.22■■■□□ 2.59
CSNK1E-204ENST00000403904 RPL3P39023 403 aaKnown RBP31.22■■■□□ 2.59
CSNK1E-204ENST00000403904 MRPL19P49406 292 aaKnown RBP31.22■■■□□ 2.59
CSNK1E-204ENST00000403904 LANCL3Q6ZV70 420 aa31.22■■■□□ 2.59
CSNK1E-204ENST00000403904 CNRIP1Q96F85 164 aaPredicted RBP31.22■■■□□ 2.59
CSNK1E-204ENST00000403904 ALOXE3Q9BYJ1 711 aa31.22■■■□□ 2.59
CSNK1E-204ENST00000403904 NMUR2Q9GZQ4 415 aa31.22■■■□□ 2.59
CSNK1E-204ENST00000403904 CLMPQ9H6B4 373 aa31.22■■■□□ 2.59
CSNK1E-204ENST00000403904 SLC35C2Q9NQQ7 365 aa31.22■■■□□ 2.59
CSNK1E-204ENST00000403904 SAR1AQ9NR31 198 aa31.22■■■□□ 2.59
CSNK1E-204ENST00000403904 TAS2R7Q9NYW3 318 aa31.22■■■□□ 2.59
CSNK1E-204ENST00000403904 ACACAQ13085 2346 aa31.22■■■□□ 2.59
CSNK1E-204ENST00000403904 KLK10O43240 276 aa31.22■■■□□ 2.59
CSNK1E-204ENST00000403904 FEN1P39748 380 aaKnown RBP31.22■■■□□ 2.59
CSNK1E-204ENST00000403904 XKP51811 444 aa31.22■■■□□ 2.59
CSNK1E-204ENST00000403904 CLNS1AP54105 237 aaKnown RBP31.22■■■□□ 2.59
CSNK1E-204ENST00000403904 CBX1P83916 185 aa31.22■■■□□ 2.59
CSNK1E-204ENST00000403904 METTL21AQ8WXB1 218 aa31.22■■■□□ 2.59
CSNK1E-204ENST00000403904 SEMA3GQ9NS98 782 aa31.22■■■□□ 2.59
CSNK1E-204ENST00000403904 MAPRE3Q9UPY8 281 aa31.22■■■□□ 2.59
CSNK1E-204ENST00000403904 ZNF780BQ9Y6R6 833 aa31.22■■■□□ 2.59
CSNK1E-204ENST00000403904 CFAP47Q6ZTR5 3102 aa31.21■■■□□ 2.59
CSNK1E-204ENST00000403904 TBX19O60806 448 aa31.21■■■□□ 2.59
CSNK1E-204ENST00000403904 LAMP1P11279 417 aa31.21■■■□□ 2.59
CSNK1E-204ENST00000403904 UBAP2LQ14157 1087 aaKnown RBP31.21■■■□□ 2.59
CSNK1E-204ENST00000403904 PGS1Q32NB8 556 aa31.21■■■□□ 2.59
CSNK1E-204ENST00000403904 CPTPQ5TA50 214 aa31.21■■■□□ 2.59
CSNK1E-204ENST00000403904 MTDHQ86UE4 582 aaKnown RBP31.21■■■□□ 2.59
CSNK1E-204ENST00000403904 CPSF7Q8N684 471 aaKnown RBP31.21■■■□□ 2.59
CSNK1E-204ENST00000403904 STARD8Q92502 1023 aa31.21■■■□□ 2.59
CSNK1E-204ENST00000403904 ZBTB18Q99592 522 aa31.21■■■□□ 2.59
CSNK1E-204ENST00000403904 PRPF18Q99633 342 aaKnown RBP31.21■■■□□ 2.59
CSNK1E-204ENST00000403904 EFHD1Q9BUP0 239 aa31.21■■■□□ 2.59
CSNK1E-204ENST00000403904 DPH1Q9BZG8 443 aa31.21■■■□□ 2.59
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms