RNA–Protein interactions for RNA: ENST00000403136.1

CEACAM1-206, Transcript of carcinoembryonic antigen related cell adhesion molecule 1, humanhuman

TSL 1 (best)

Gene CEACAM1, Length 1,778 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM1-206ENST00000403136 C11orf65Q8NCR3 313 aa12.56□□□□□ -0.4
CEACAM1-206ENST00000403136 CATSPER1Q8NEC5 780 aa12.56□□□□□ -0.4
CEACAM1-206ENST00000403136 MAL2Q969L2 176 aa12.56□□□□□ -0.4
CEACAM1-206ENST00000403136 C10orf90Q96M02 699 aa12.56□□□□□ -0.4
CEACAM1-206ENST00000403136 ZNF681Q96N22 645 aa12.56□□□□□ -0.4
CEACAM1-206ENST00000403136 TMEM121BQ9BXQ6 578 aaPredicted RBP12.56□□□□□ -0.4
CEACAM1-206ENST00000403136 PDE7BQ9NP56 450 aa12.56□□□□□ -0.4
CEACAM1-206ENST00000403136 FSCN3Q9NQT6 498 aa12.56□□□□□ -0.4
CEACAM1-206ENST00000403136 PRDM9Q9NQV7 894 aa12.56□□□□□ -0.4
CEACAM1-206ENST00000403136 GIMAP4Q9NUV9 329 aa12.56□□□□□ -0.4
CEACAM1-206ENST00000403136 PLCL2Q9UPR0 1127 aa12.56□□□□□ -0.4
CEACAM1-206ENST00000403136 ENTPD4Q9Y227 616 aa12.56□□□□□ -0.4
CEACAM1-206ENST00000403136 NAALAD2Q9Y3Q0 740 aa12.56□□□□□ -0.4
CEACAM1-206ENST00000403136 DTNAQ9Y4J8 743 aa12.56□□□□□ -0.4
CEACAM1-206ENST00000403136 ZNF780BQ9Y6R6 833 aa12.56□□□□□ -0.4
CEACAM1-206ENST00000403136 ZBTB11O95625 1053 aaPredicted RBP12.55□□□□□ -0.4
CEACAM1-206ENST00000403136 CFIP05156 583 aa12.55□□□□□ -0.4
CEACAM1-206ENST00000403136 ALPPL2P10696 532 aa12.55□□□□□ -0.4
CEACAM1-206ENST00000403136 GPC1P35052 558 aa12.55□□□□□ -0.4
CEACAM1-206ENST00000403136 HOXD12P35452 270 aa12.55□□□□□ -0.4
CEACAM1-206ENST00000403136 FEN1P39748 380 aaKnown RBP12.55□□□□□ -0.4
CEACAM1-206ENST00000403136 OLR1P78380 273 aa12.55□□□□□ -0.4
CEACAM1-206ENST00000403136 GPLD1P80108 840 aa12.55□□□□□ -0.4
CEACAM1-206ENST00000403136 CFHR1Q03591 330 aa12.55□□□□□ -0.4
CEACAM1-206ENST00000403136 SPIDRQ14159 915 aa12.55□□□□□ -0.4
CEACAM1-206ENST00000403136 AMZ1Q400G9 498 aa12.55□□□□□ -0.4
CEACAM1-206ENST00000403136 SPDYE7PQ495Y7 208 aa12.55□□□□□ -0.4
CEACAM1-206ENST00000403136 GCNT6Q5T4J0 391 aa12.55□□□□□ -0.4
CEACAM1-206ENST00000403136 USP53Q70EK8 1073 aa12.55□□□□□ -0.4
CEACAM1-206ENST00000403136 PLXDC1Q8IUK5 500 aa12.55□□□□□ -0.4
CEACAM1-206ENST00000403136 FAM86B1Q8N7N1 296 aa12.55□□□□□ -0.4
CEACAM1-206ENST00000403136 ANKFN1Q8N957 763 aa12.55□□□□□ -0.4
CEACAM1-206ENST00000403136 Q8N9G6 341 aaPredicted RBP12.55□□□□□ -0.4
CEACAM1-206ENST00000403136 SUN3Q8TAQ9 357 aa12.55□□□□□ -0.4
CEACAM1-206ENST00000403136 CENPNQ96H22 339 aaPredicted RBP12.55□□□□□ -0.4
CEACAM1-206ENST00000403136 PYURFQ96I23 114 aa12.55□□□□□ -0.4
CEACAM1-206ENST00000403136 ZNF285Q96NJ3 590 aa12.55□□□□□ -0.4
CEACAM1-206ENST00000403136 NPLQ9BXD5 320 aaPredicted RBP12.55□□□□□ -0.4
CEACAM1-206ENST00000403136 TMEM38AQ9H6F2 299 aa12.55□□□□□ -0.4
CEACAM1-206ENST00000403136 ZSCAN32Q9NX65 697 aa12.55□□□□□ -0.4
CEACAM1-206ENST00000403136 KLHL3Q9UH77 587 aa12.55□□□□□ -0.4
CEACAM1-206ENST00000403136 ARID1BQ8NFD5 2236 aaPredicted RBP12.54□□□□□ -0.4
CEACAM1-206ENST00000403136 FAM149AA5PLN7 773 aa12.54□□□□□ -0.4
CEACAM1-206ENST00000403136 ZNF860A6NHJ4 632 aa12.54□□□□□ -0.4
CEACAM1-206ENST00000403136 DUX1O43812 170 aa12.54□□□□□ -0.4
CEACAM1-206ENST00000403136 B4GALT2O60909 372 aa12.54□□□□□ -0.4
CEACAM1-206ENST00000403136 CD1CP29017 333 aa12.54□□□□□ -0.4
CEACAM1-206ENST00000403136 PCGF2P35227 344 aa12.54□□□□□ -0.4
CEACAM1-206ENST00000403136 MLLT3P42568 568 aaPredicted RBP12.54□□□□□ -0.4
CEACAM1-206ENST00000403136 DUSP2Q05923 314 aa12.54□□□□□ -0.4
CEACAM1-206ENST00000403136 COL9A2Q14055 689 aaPredicted RBP12.54□□□□□ -0.4
CEACAM1-206ENST00000403136 NKG7Q16617 165 aa12.54□□□□□ -0.4
CEACAM1-206ENST00000403136 CARFQ8N187 725 aa12.54□□□□□ -0.4
CEACAM1-206ENST00000403136 OR4K14Q8NGD5 310 aa12.54□□□□□ -0.4
CEACAM1-206ENST00000403136 OR4C6Q8NH72 309 aa12.54□□□□□ -0.4
CEACAM1-206ENST00000403136 CEP76Q8TAP6 659 aa12.54□□□□□ -0.4
CEACAM1-206ENST00000403136 EME1Q96AY2 570 aa12.54□□□□□ -0.4
CEACAM1-206ENST00000403136 NAF1Q96HR8 494 aaKnown RBP12.54□□□□□ -0.4
CEACAM1-206ENST00000403136 ASPSCR1Q9BZE9 553 aa12.54□□□□□ -0.4
CEACAM1-206ENST00000403136 GAREM1Q9H706 876 aa12.54□□□□□ -0.4
CEACAM1-206ENST00000403136 YY1AP1Q9H869 796 aa12.54□□□□□ -0.4
CEACAM1-206ENST00000403136 CAPN10Q9HC96 672 aa12.54□□□□□ -0.4
CEACAM1-206ENST00000403136 ANKHQ9HCJ1 492 aa12.54□□□□□ -0.4
CEACAM1-206ENST00000403136 SEMA3GQ9NS98 782 aa12.54□□□□□ -0.4
CEACAM1-206ENST00000403136 DNAAF2Q9NVR5 837 aaKnown RBP12.54□□□□□ -0.4
CEACAM1-206ENST00000403136 SOHLH2Q9NX45 425 aa12.54□□□□□ -0.4
CEACAM1-206ENST00000403136 SAMD4AQ9UPU9 718 aaKnown RBP12.54□□□□□ -0.4
CEACAM1-206ENST00000403136 SPACA6W5XKT8 324 aa12.54□□□□□ -0.4
CEACAM1-206ENST00000403136 SCN3AQ9NY46 2000 aa12.54□□□□□ -0.4
CEACAM1-206ENST00000403136 PI4KAP42356 2102 aa12.54□□□□□ -0.4
CEACAM1-206ENST00000403136 A0A1W2PS29 197 aa12.53□□□□□ -0.4
CEACAM1-206ENST00000403136 SGK494L7N484 410 aa12.53□□□□□ -0.4
CEACAM1-206ENST00000403136 YKT6O15498 198 aa12.53□□□□□ -0.4
CEACAM1-206ENST00000403136 LDLRP01130 860 aa12.53□□□□□ -0.4
CEACAM1-206ENST00000403136 ACADSP16219 412 aa12.53□□□□□ -0.4
CEACAM1-206ENST00000403136 HOXB6P17509 224 aaKnown RBP12.53□□□□□ -0.4
CEACAM1-206ENST00000403136 ATP6V1C1P21283 382 aa12.53□□□□□ -0.4
CEACAM1-206ENST00000403136 XKP51811 444 aa12.53□□□□□ -0.4
CEACAM1-206ENST00000403136 SIM1P81133 766 aaPredicted RBP12.53□□□□□ -0.4
CEACAM1-206ENST00000403136 EEF1A2Q05639 463 aaKnown RBP12.53□□□□□ -0.4
CEACAM1-206ENST00000403136 ATP6AP1Q15904 470 aa12.53□□□□□ -0.4
CEACAM1-206ENST00000403136 NDUFA9Q16795 377 aa12.53□□□□□ -0.4
CEACAM1-206ENST00000403136 ZNF528Q3MIS6 628 aa12.53□□□□□ -0.4
CEACAM1-206ENST00000403136 LRRC23Q53EV4 343 aaPredicted RBP12.53□□□□□ -0.4
CEACAM1-206ENST00000403136 CMPK2Q5EBM0 449 aa12.53□□□□□ -0.4
CEACAM1-206ENST00000403136 OR52E8Q6IFG1 317 aa12.53□□□□□ -0.4
CEACAM1-206ENST00000403136 TMEM64Q6YI46 380 aa12.53□□□□□ -0.4
CEACAM1-206ENST00000403136 RABEPKQ7Z6M1 372 aa12.53□□□□□ -0.4
CEACAM1-206ENST00000403136 ZC3H7AQ8IWR0 971 aaKnown RBP12.53□□□□□ -0.4
CEACAM1-206ENST00000403136 SAMD14Q8IZD0 417 aaPredicted RBP12.53□□□□□ -0.4
CEACAM1-206ENST00000403136 CA13Q8N1Q1 262 aa12.53□□□□□ -0.4
CEACAM1-206ENST00000403136 ZBTB44Q8NCP5 570 aa12.53□□□□□ -0.4
CEACAM1-206ENST00000403136 ICA1LQ8NDH6 482 aa12.53□□□□□ -0.4
CEACAM1-206ENST00000403136 OR6C4Q8NGE1 309 aa12.53□□□□□ -0.4
CEACAM1-206ENST00000403136 OR5T3Q8NGG3 340 aa12.53□□□□□ -0.4
CEACAM1-206ENST00000403136 SLC47A1Q96FL8 570 aa12.53□□□□□ -0.4
CEACAM1-206ENST00000403136 CSF3RQ99062 836 aa12.53□□□□□ -0.4
CEACAM1-206ENST00000403136 MAGIXQ9H6Y5 334 aa12.53□□□□□ -0.4
CEACAM1-206ENST00000403136 COQ10BQ9H8M1 238 aa12.53□□□□□ -0.4
CEACAM1-206ENST00000403136 RPS6KA6Q9UK32 745 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms