RNA–Protein interactions for RNA: ENST00000399299.5

SMIM11A-203, Transcript of small integral membrane protein 11A, humanhuman

TSL 1 (best) BASIC

Gene SMIM11A, Length 1,033 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11A-203ENST00000399299 TNNI3P19429 210 aa13.82□□□□□ -0.2
SMIM11A-203ENST00000399299 NEK2P51955 445 aa13.82□□□□□ -0.2
SMIM11A-203ENST00000399299 PLIN5Q00G26 463 aa13.82□□□□□ -0.2
SMIM11A-203ENST00000399299 ID2Q02363 134 aa13.82□□□□□ -0.2
SMIM11A-203ENST00000399299 FOLH1Q04609 750 aa13.82□□□□□ -0.2
SMIM11A-203ENST00000399299 IFT88Q13099 833 aa13.82□□□□□ -0.2
SMIM11A-203ENST00000399299 C18orf63Q68DL7 685 aa13.82□□□□□ -0.2
SMIM11A-203ENST00000399299 CYP20A1Q6UW02 462 aa13.82□□□□□ -0.2
SMIM11A-203ENST00000399299 MILR1Q7Z6M3 343 aa13.82□□□□□ -0.2
SMIM11A-203ENST00000399299 PNPLA5Q7Z6Z6 429 aaPredicted RBP13.82□□□□□ -0.2
SMIM11A-203ENST00000399299 ST13P4Q8IZP2 240 aaPredicted RBP13.82□□□□□ -0.2
SMIM11A-203ENST00000399299 OR4F6Q8NGB9 312 aa13.82□□□□□ -0.2
SMIM11A-203ENST00000399299 ART5Q96L15 291 aa13.82□□□□□ -0.2
SMIM11A-203ENST00000399299 DGAT2Q96PD7 388 aa13.82□□□□□ -0.2
SMIM11A-203ENST00000399299 PELOQ9BRX2 385 aaKnown RBP13.82□□□□□ -0.2
SMIM11A-203ENST00000399299 L2HGDHQ9H9P8 463 aa13.82□□□□□ -0.2
SMIM11A-203ENST00000399299 SEMA4BQ9NPR2 832 aaPredicted RBP13.82□□□□□ -0.2
SMIM11A-203ENST00000399299 COPS7AQ9UBW8 275 aa13.82□□□□□ -0.2
SMIM11A-203ENST00000399299 ADAM29Q9UKF5 820 aa13.82□□□□□ -0.2
SMIM11A-203ENST00000399299 NBPF19A0A087WUL8 3843 aa13.81□□□□□ -0.2
SMIM11A-203ENST00000399299 A1L4Q6 167 aa13.81□□□□□ -0.2
SMIM11A-203ENST00000399299 KLRC4-KLRK1H3BQV0 150 aa13.81□□□□□ -0.2
SMIM11A-203ENST00000399299 OR2J2O76002 312 aa13.81□□□□□ -0.2
SMIM11A-203ENST00000399299 CLDN1O95832 211 aa13.81□□□□□ -0.2
SMIM11A-203ENST00000399299 IGKV3-11P04433 115 aa13.81□□□□□ -0.2
SMIM11A-203ENST00000399299 GSTA1P08263 222 aa13.81□□□□□ -0.2
SMIM11A-203ENST00000399299 NR2F6P10588 404 aa13.81□□□□□ -0.2
SMIM11A-203ENST00000399299 ALOX15P16050 662 aaPredicted RBP13.81□□□□□ -0.2
SMIM11A-203ENST00000399299 ZNF24P17028 368 aa13.81□□□□□ -0.2
SMIM11A-203ENST00000399299 TAC1P20366 129 aa13.81□□□□□ -0.2
SMIM11A-203ENST00000399299 CA7P43166 264 aa13.81□□□□□ -0.2
SMIM11A-203ENST00000399299 HK2P52789 917 aa13.81□□□□□ -0.2
SMIM11A-203ENST00000399299 HERVK_113P63132 956 aa13.81□□□□□ -0.2
SMIM11A-203ENST00000399299 RNF4P78317 190 aa13.81□□□□□ -0.2
SMIM11A-203ENST00000399299 SRSF11Q05519 484 aaKnown RBP13.81□□□□□ -0.2
SMIM11A-203ENST00000399299 C1QL3Q5VWW1 255 aa13.81□□□□□ -0.2
SMIM11A-203ENST00000399299 TTC19Q6DKK2 380 aaPredicted RBP13.81□□□□□ -0.2
SMIM11A-203ENST00000399299 FJX1Q86VR8 437 aa13.81□□□□□ -0.2
SMIM11A-203ENST00000399299 OR4N5Q8IXE1 308 aa13.81□□□□□ -0.2
SMIM11A-203ENST00000399299 CPSF7Q8N684 471 aaKnown RBP13.81□□□□□ -0.2
SMIM11A-203ENST00000399299 ZNF321PQ8N8H1 164 aa13.81□□□□□ -0.2
SMIM11A-203ENST00000399299 LRRN4CLQ8ND94 238 aa13.81□□□□□ -0.2
SMIM11A-203ENST00000399299 OR5L2Q8NGL0 311 aa13.81□□□□□ -0.2
SMIM11A-203ENST00000399299 ZNF721Q8TF20 911 aa13.81□□□□□ -0.2
SMIM11A-203ENST00000399299 ASB15Q8WXK1 588 aa13.81□□□□□ -0.2
SMIM11A-203ENST00000399299 RBM18Q96H35 190 aaKnown RBP13.81□□□□□ -0.2
SMIM11A-203ENST00000399299 FBXL20Q96IG2 436 aa13.81□□□□□ -0.2
SMIM11A-203ENST00000399299 ERVK-6Q9BXR3 956 aa13.81□□□□□ -0.2
SMIM11A-203ENST00000399299 ELOVL6Q9H5J4 265 aa13.81□□□□□ -0.2
SMIM11A-203ENST00000399299 WDR41Q9HAD4 459 aa13.81□□□□□ -0.2
SMIM11A-203ENST00000399299 TIMMDC1Q9NPL8 285 aa13.81□□□□□ -0.2
SMIM11A-203ENST00000399299 RYDENQ9NUL5 291 aaKnown RBP13.81□□□□□ -0.2
SMIM11A-203ENST00000399299 AHSPQ9NZD4 102 aa13.81□□□□□ -0.2
SMIM11A-203ENST00000399299 TMEM216Q9P0N5 145 aa13.81□□□□□ -0.2
SMIM11A-203ENST00000399299 TRPS1Q9UHF7 1281 aa13.81□□□□□ -0.2
SMIM11A-203ENST00000399299 MYO7BQ6PIF6 2116 aa13.81□□□□□ -0.2
SMIM11A-203ENST00000399299 A0A1W2PR48 441 aa13.8□□□□□ -0.2
SMIM11A-203ENST00000399299 A8MVJ9 347 aa13.8□□□□□ -0.2
SMIM11A-203ENST00000399299 ASNA1O43681 348 aa13.8□□□□□ -0.2
SMIM11A-203ENST00000399299 SLC19A2O60779 497 aa13.8□□□□□ -0.2
SMIM11A-203ENST00000399299 WISP2O76076 250 aa13.8□□□□□ -0.2
SMIM11A-203ENST00000399299 GPR75O95800 540 aa13.8□□□□□ -0.2
SMIM11A-203ENST00000399299 AIFM1O95831 613 aa13.8□□□□□ -0.2
SMIM11A-203ENST00000399299 TNFRSF8P28908 595 aa13.8□□□□□ -0.2
SMIM11A-203ENST00000399299 GALNSP34059 522 aa13.8□□□□□ -0.2
SMIM11A-203ENST00000399299 MEOX1P50221 254 aa13.8□□□□□ -0.2
SMIM11A-203ENST00000399299 CLCQ05315 142 aa13.8□□□□□ -0.2
SMIM11A-203ENST00000399299 SPRED3Q2MJR0 410 aa13.8□□□□□ -0.2
SMIM11A-203ENST00000399299 LETMD1Q6P1Q0 360 aa13.8□□□□□ -0.2
SMIM11A-203ENST00000399299 MTFR2Q6P444 385 aa13.8□□□□□ -0.2
SMIM11A-203ENST00000399299 BNC2Q6ZN30 1099 aaPredicted RBP13.8□□□□□ -0.2
SMIM11A-203ENST00000399299 Q6ZPB1 254 aaPredicted RBP13.8□□□□□ -0.2
SMIM11A-203ENST00000399299 RPS27LQ71UM5 84 aaKnown RBP13.8□□□□□ -0.2
SMIM11A-203ENST00000399299 PAGE2Q7Z2X7 111 aa13.8□□□□□ -0.2
SMIM11A-203ENST00000399299 METTL4Q8N3J2 472 aa13.8□□□□□ -0.2
SMIM11A-203ENST00000399299 ZFP62Q8NB50 900 aaPredicted RBP13.8□□□□□ -0.2
SMIM11A-203ENST00000399299 NUBPLQ8TB37 319 aa13.8□□□□□ -0.2
SMIM11A-203ENST00000399299 MZB1Q8WU39 189 aa13.8□□□□□ -0.2
SMIM11A-203ENST00000399299 MTFMTQ96DP5 389 aaKnown RBP13.8□□□□□ -0.2
SMIM11A-203ENST00000399299 SENP5Q96HI0 755 aaPredicted RBP13.8□□□□□ -0.2
SMIM11A-203ENST00000399299 RASL10BQ96S79 203 aa13.8□□□□□ -0.2
SMIM11A-203ENST00000399299 BRF2Q9HAW0 419 aa13.8□□□□□ -0.2
SMIM11A-203ENST00000399299 SDAD1Q9NVU7 687 aaKnown RBP eCLIP13.8□□□□□ -0.2
SMIM11A-203ENST00000399299 HPF1Q9NWY4 346 aa13.8□□□□□ -0.2
SMIM11A-203ENST00000399299 SNX6Q9UNH7 406 aa13.8□□□□□ -0.2
SMIM11A-203ENST00000399299 ERVK-11Q9UQG0 969 aa13.8□□□□□ -0.2
SMIM11A-203ENST00000399299 ZNF835Q9Y2P0 537 aa13.8□□□□□ -0.2
SMIM11A-203ENST00000399299 NOTCH2Q04721 2471 aa13.8□□□□□ -0.2
SMIM11A-203ENST00000399299 GTF3C1Q12789 2109 aa13.79□□□□□ -0.2
SMIM11A-203ENST00000399299 TRGV8A0A0C4DH27 118 aa13.79□□□□□ -0.2
SMIM11A-203ENST00000399299 A0A1B0GTL3 188 aa13.79□□□□□ -0.2
SMIM11A-203ENST00000399299 NPIPA5E9PKD4 350 aa13.79□□□□□ -0.2
SMIM11A-203ENST00000399299 WWP2O00308 870 aa13.79□□□□□ -0.2
SMIM11A-203ENST00000399299 PEX1O43933 1283 aa13.79□□□□□ -0.2
SMIM11A-203ENST00000399299 DLX3O60479 287 aa13.79□□□□□ -0.2
SMIM11A-203ENST00000399299 ZG16O60844 167 aa13.79□□□□□ -0.2
SMIM11A-203ENST00000399299 PRKRAO75569 313 aaKnown RBP13.79□□□□□ -0.2
SMIM11A-203ENST00000399299 ATP5F1P24539 256 aaPredicted RBP13.79□□□□□ -0.2
SMIM11A-203ENST00000399299 HSD17B3P37058 310 aa13.79□□□□□ -0.2
SMIM11A-203ENST00000399299 SOX3P41225 446 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms