RNA–Protein interactions for RNA: ENST00000397827.7

CHRFAM7A-202, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

TSL 5 BASIC

Gene CHRFAM7A, Length 2,794 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-202ENST00000397827 LRRTM4Q86VH4 590 aa17.45■□□□□ 0.38
CHRFAM7A-202ENST00000397827 GGHQ92820 318 aa17.45■□□□□ 0.38
CHRFAM7A-202ENST00000397827 LGALS12Q96DT0 336 aa17.45■□□□□ 0.38
CHRFAM7A-202ENST00000397827 MED30Q96HR3 178 aa17.45■□□□□ 0.38
CHRFAM7A-202ENST00000397827 EPS8L2Q9H6S3 715 aa17.45■□□□□ 0.38
CHRFAM7A-202ENST00000397827 ZNF226Q9NYT6 803 aa17.45■□□□□ 0.38
CHRFAM7A-202ENST00000397827 RGS13O14921 159 aa17.45■□□□□ 0.38
CHRFAM7A-202ENST00000397827 TPPPO94811 219 aa17.45■□□□□ 0.38
CHRFAM7A-202ENST00000397827 PCDH8O95206 1070 aa17.45■□□□□ 0.38
CHRFAM7A-202ENST00000397827 GADD45GO95257 159 aa17.45■□□□□ 0.38
CHRFAM7A-202ENST00000397827 TGM1P22735 817 aa17.45■□□□□ 0.38
CHRFAM7A-202ENST00000397827 BSGP35613 385 aa17.45■□□□□ 0.38
CHRFAM7A-202ENST00000397827 ARMC8Q8IUR7 673 aa17.45■□□□□ 0.38
CHRFAM7A-202ENST00000397827 SLC38A6Q8IZM9 456 aa17.45■□□□□ 0.38
CHRFAM7A-202ENST00000397827 DNAJC22Q8N4W6 341 aa17.45■□□□□ 0.38
CHRFAM7A-202ENST00000397827 DYNC2LI1Q8TCX1 351 aa17.45■□□□□ 0.38
CHRFAM7A-202ENST00000397827 RSPO3Q9BXY4 272 aaPredicted RBP17.45■□□□□ 0.38
CHRFAM7A-202ENST00000397827 MS4A8Q9BY19 250 aa17.45■□□□□ 0.38
CHRFAM7A-202ENST00000397827 AHSPQ9NZD4 102 aa17.45■□□□□ 0.38
CHRFAM7A-202ENST00000397827 C1QTNF3-AMACRE9PGA6 284 aa17.44■□□□□ 0.38
CHRFAM7A-202ENST00000397827 CRYZL1O95825 349 aa17.44■□□□□ 0.38
CHRFAM7A-202ENST00000397827 CLCNKAP51800 687 aa17.44■□□□□ 0.38
CHRFAM7A-202ENST00000397827 PUM1Q14671 1186 aaKnown RBP eCLIP17.44■□□□□ 0.38
CHRFAM7A-202ENST00000397827 ADCK1Q86TW2 530 aa17.44■□□□□ 0.38
CHRFAM7A-202ENST00000397827 PHF10Q8WUB8 498 aaKnown RBP17.44■□□□□ 0.38
CHRFAM7A-202ENST00000397827 SLC38A5Q8WUX1 472 aa17.44■□□□□ 0.38
CHRFAM7A-202ENST00000397827 SMARCD2Q92925 531 aa17.44■□□□□ 0.38
CHRFAM7A-202ENST00000397827 EXOSC8Q96B26 276 aaKnown RBP17.44■□□□□ 0.38
CHRFAM7A-202ENST00000397827 AIF1LQ9BQI0 150 aa17.44■□□□□ 0.38
CHRFAM7A-202ENST00000397827 MBNL1Q9NR56 388 aaKnown RBP17.44■□□□□ 0.38
CHRFAM7A-202ENST00000397827 PRKAG2Q9UGJ0 569 aa17.44■□□□□ 0.38
CHRFAM7A-202ENST00000397827 ALPK3Q96L96 1907 aa17.44■□□□□ 0.38
CHRFAM7A-202ENST00000397827 PPM1DO15297 605 aa17.44■□□□□ 0.38
CHRFAM7A-202ENST00000397827 IFNA14P01570 189 aa17.44■□□□□ 0.38
CHRFAM7A-202ENST00000397827 ELOAQ14241 798 aaKnown RBP17.44■□□□□ 0.38
CHRFAM7A-202ENST00000397827 DGUOKQ16854 277 aa17.44■□□□□ 0.38
CHRFAM7A-202ENST00000397827 METRNLQ641Q3 311 aa17.44■□□□□ 0.38
CHRFAM7A-202ENST00000397827 AMER3Q8N944 861 aa17.44■□□□□ 0.38
CHRFAM7A-202ENST00000397827 BCL7BQ9BQE9 202 aa17.44■□□□□ 0.38
CHRFAM7A-202ENST00000397827 MENTQ9BUN1 341 aa17.44■□□□□ 0.38
CHRFAM7A-202ENST00000397827 ITPAQ9BY32 194 aa17.44■□□□□ 0.38
CHRFAM7A-202ENST00000397827 ZNF556Q9HAH1 456 aa17.44■□□□□ 0.38
CHRFAM7A-202ENST00000397827 MOV10Q9HCE1 1003 aaKnown RBP17.44■□□□□ 0.38
CHRFAM7A-202ENST00000397827 AKIP1Q9NQ31 210 aa17.44■□□□□ 0.38
CHRFAM7A-202ENST00000397827 LHX9Q9NQ69 397 aa17.44■□□□□ 0.38
CHRFAM7A-202ENST00000397827 POLE4Q9NR33 117 aa17.44■□□□□ 0.38
CHRFAM7A-202ENST00000397827 ICKQ9UPZ9 632 aa17.44■□□□□ 0.38
CHRFAM7A-202ENST00000397827 ENPP4Q9Y6X5 453 aa17.44■□□□□ 0.38
CHRFAM7A-202ENST00000397827 MYO10Q9HD67 2058 aa17.43■□□□□ 0.38
CHRFAM7A-202ENST00000397827 CLCA1A8K7I4 914 aa17.43■□□□□ 0.38
CHRFAM7A-202ENST00000397827 GRXCR1A8MXD5 290 aa17.43■□□□□ 0.38
CHRFAM7A-202ENST00000397827 CENPBD1B2RD01 187 aa17.43■□□□□ 0.38
CHRFAM7A-202ENST00000397827 B4GALT2O60909 372 aa17.43■□□□□ 0.38
CHRFAM7A-202ENST00000397827 STATHP02808 62 aa17.43■□□□□ 0.38
CHRFAM7A-202ENST00000397827 SERPIND1P05546 499 aa17.43■□□□□ 0.38
CHRFAM7A-202ENST00000397827 DRD3P35462 400 aa17.43■□□□□ 0.38
CHRFAM7A-202ENST00000397827 RPA4Q13156 261 aa17.43■□□□□ 0.38
CHRFAM7A-202ENST00000397827 UBE2UQ5VVX9 321 aa17.43■□□□□ 0.38
CHRFAM7A-202ENST00000397827 REEP3Q6NUK4 255 aa17.43■□□□□ 0.38
CHRFAM7A-202ENST00000397827 ADAMTSL4Q6UY14 1074 aa17.43■□□□□ 0.38
CHRFAM7A-202ENST00000397827 AKAP14Q86UN6 197 aa17.43■□□□□ 0.38
CHRFAM7A-202ENST00000397827 AQP11Q8NBQ7 271 aa17.43■□□□□ 0.38
CHRFAM7A-202ENST00000397827 MINDY2Q8NBR6 621 aa17.43■□□□□ 0.38
CHRFAM7A-202ENST00000397827 HMG20AQ9NP66 347 aa17.43■□□□□ 0.38
CHRFAM7A-202ENST00000397827 TEX10Q9NXF1 929 aaPredicted RBP17.43■□□□□ 0.38
CHRFAM7A-202ENST00000397827 SATB2Q9UPW6 733 aa17.43■□□□□ 0.38
CHRFAM7A-202ENST00000397827 M0R082 166 aa17.43■□□□□ 0.38
CHRFAM7A-202ENST00000397827 TMPRSS11DO60235 418 aa17.43■□□□□ 0.38
CHRFAM7A-202ENST00000397827 SH3BP5O60239 455 aa17.43■□□□□ 0.38
CHRFAM7A-202ENST00000397827 ICMTO60725 284 aa17.43■□□□□ 0.38
CHRFAM7A-202ENST00000397827 MRPS14O60783 128 aaKnown RBP17.43■□□□□ 0.38
CHRFAM7A-202ENST00000397827 GASTP01350 101 aa17.43■□□□□ 0.38
CHRFAM7A-202ENST00000397827 STSP08842 583 aa17.43■□□□□ 0.38
CHRFAM7A-202ENST00000397827 LIM2P55344 173 aa17.43■□□□□ 0.38
CHRFAM7A-202ENST00000397827 TAS2R38P59533 333 aa17.43■□□□□ 0.38
CHRFAM7A-202ENST00000397827 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP17.43■□□□□ 0.38
CHRFAM7A-202ENST00000397827 ADCK2Q7Z695 626 aa17.43■□□□□ 0.38
CHRFAM7A-202ENST00000397827 ZNF605Q86T29 641 aa17.43■□□□□ 0.38
CHRFAM7A-202ENST00000397827 GRAMD2AQ8IUY3 354 aa17.43■□□□□ 0.38
CHRFAM7A-202ENST00000397827 LINC01555Q8NAE3 123 aa17.43■□□□□ 0.38
CHRFAM7A-202ENST00000397827 KLK6Q92876 244 aa17.43■□□□□ 0.38
CHRFAM7A-202ENST00000397827 RHBGQ9H310 441 aa17.43■□□□□ 0.38
CHRFAM7A-202ENST00000397827 CERS4Q9HA82 394 aa17.43■□□□□ 0.38
CHRFAM7A-202ENST00000397827 ZBTB20Q9HC78 741 aaPredicted RBP17.43■□□□□ 0.38
CHRFAM7A-202ENST00000397827 CRNNQ9UBG3 495 aaPredicted RBP17.43■□□□□ 0.38
CHRFAM7A-202ENST00000397827 HCN4Q9Y3Q4 1203 aa17.43■□□□□ 0.38
CHRFAM7A-202ENST00000397827 A0A1W2PPV9 198 aa17.42■□□□□ 0.38
CHRFAM7A-202ENST00000397827 WASHC1A8K0Z3 465 aa17.42■□□□□ 0.38
CHRFAM7A-202ENST00000397827 EFCAB9A8MZ26 197 aa17.42■□□□□ 0.38
CHRFAM7A-202ENST00000397827 FFAR1O14842 300 aa17.42■□□□□ 0.38
CHRFAM7A-202ENST00000397827 MID1O15344 667 aa17.42■□□□□ 0.38
CHRFAM7A-202ENST00000397827 PDPK1O15530 556 aa17.42■□□□□ 0.38
CHRFAM7A-202ENST00000397827 OR1F1O43749 312 aa17.42■□□□□ 0.38
CHRFAM7A-202ENST00000397827 IFNW1P05000 195 aa17.42■□□□□ 0.38
CHRFAM7A-202ENST00000397827 ERGP11308 486 aa17.42■□□□□ 0.38
CHRFAM7A-202ENST00000397827 OPRD1P41143 372 aa17.42■□□□□ 0.38
CHRFAM7A-202ENST00000397827 LIMS1P48059 325 aa17.42■□□□□ 0.38
CHRFAM7A-202ENST00000397827 PXNP49023 591 aaPredicted RBP17.42■□□□□ 0.38
CHRFAM7A-202ENST00000397827 CSNK2BP67870 215 aa17.42■□□□□ 0.38
CHRFAM7A-202ENST00000397827 PTGES3Q15185 160 aaKnown RBP17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms