RNA–Protein interactions for RNA: ENST00000397411.6

TSPAN4-207, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TSPAN4, Length 1,025 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-207ENST00000397411 PCDH7O60245 1069 aa23.71■■□□□ 1.39
TSPAN4-207ENST00000397411 GPR75O95800 540 aa23.71■■□□□ 1.39
TSPAN4-207ENST00000397411 PIK3R1P27986 724 aa23.71■■□□□ 1.39
TSPAN4-207ENST00000397411 TRA2BP62995 288 aaKnown RBP23.71■■□□□ 1.39
TSPAN4-207ENST00000397411 ARG2P78540 354 aa23.71■■□□□ 1.39
TSPAN4-207ENST00000397411 TERF2Q15554 542 aa23.71■■□□□ 1.39
TSPAN4-207ENST00000397411 CHI3L2Q15782 390 aa23.71■■□□□ 1.39
TSPAN4-207ENST00000397411 OR52E8Q6IFG1 317 aa23.71■■□□□ 1.39
TSPAN4-207ENST00000397411 IGFL3Q6UXB1 125 aa23.71■■□□□ 1.39
TSPAN4-207ENST00000397411 ATG14Q6ZNE5 492 aa23.71■■□□□ 1.39
TSPAN4-207ENST00000397411 TRIM46Q7Z4K8 759 aa23.71■■□□□ 1.39
TSPAN4-207ENST00000397411 SLC5A8Q8N695 610 aa23.71■■□□□ 1.39
TSPAN4-207ENST00000397411 RBMXL3Q8N7X1 1067 aaKnown RBP23.71■■□□□ 1.39
TSPAN4-207ENST00000397411 DNAJB14Q8TBM8 379 aa23.71■■□□□ 1.39
TSPAN4-207ENST00000397411 AGR3Q8TD06 166 aa23.71■■□□□ 1.39
TSPAN4-207ENST00000397411 APIPQ96GX9 242 aa23.71■■□□□ 1.39
TSPAN4-207ENST00000397411 DEFB126Q9BYW3 111 aa23.71■■□□□ 1.39
TSPAN4-207ENST00000397411 SLAMF7Q9NQ25 335 aa23.71■■□□□ 1.39
TSPAN4-207ENST00000397411 TEX10Q9NXF1 929 aaPredicted RBP23.71■■□□□ 1.39
TSPAN4-207ENST00000397411 NKIRAS1Q9NYS0 192 aa23.71■■□□□ 1.39
TSPAN4-207ENST00000397411 ABI3Q9P2A4 366 aa23.71■■□□□ 1.39
TSPAN4-207ENST00000397411 MCM8Q9UJA3 840 aa23.71■■□□□ 1.39
TSPAN4-207ENST00000397411 C17orf105B2RV13 164 aa23.7■■□□□ 1.38
TSPAN4-207ENST00000397411 PGRMC2O15173 223 aa23.7■■□□□ 1.38
TSPAN4-207ENST00000397411 SUV39H1O43463 412 aa23.7■■□□□ 1.38
TSPAN4-207ENST00000397411 SLC28A2O43868 658 aa23.7■■□□□ 1.38
TSPAN4-207ENST00000397411 OR10H2O60403 315 aa23.7■■□□□ 1.38
TSPAN4-207ENST00000397411 HSPA4LO95757 839 aa23.7■■□□□ 1.38
TSPAN4-207ENST00000397411 SERPINE1P05121 402 aa23.7■■□□□ 1.38
TSPAN4-207ENST00000397411 ALOX15P16050 662 aaPredicted RBP23.7■■□□□ 1.38
TSPAN4-207ENST00000397411 CLCN2P51788 898 aa23.7■■□□□ 1.38
TSPAN4-207ENST00000397411 MPP2Q14168 576 aa23.7■■□□□ 1.38
TSPAN4-207ENST00000397411 SH2D4BQ5SQS7 431 aa23.7■■□□□ 1.38
TSPAN4-207ENST00000397411 FCRLBQ6BAA4 426 aa23.7■■□□□ 1.38
TSPAN4-207ENST00000397411 DDIASQ8IXT1 998 aa23.7■■□□□ 1.38
TSPAN4-207ENST00000397411 NFAM1Q8NET5 270 aaPredicted RBP23.7■■□□□ 1.38
TSPAN4-207ENST00000397411 OR14A16Q8NHC5 309 aa23.7■■□□□ 1.38
TSPAN4-207ENST00000397411 MGARPQ8TDB4 240 aa23.7■■□□□ 1.38
TSPAN4-207ENST00000397411 TM4SF18Q96CE8 201 aa23.7■■□□□ 1.38
TSPAN4-207ENST00000397411 VMP1Q96GC9 406 aa23.7■■□□□ 1.38
TSPAN4-207ENST00000397411 PLA2G3Q9NZ20 509 aa23.7■■□□□ 1.38
TSPAN4-207ENST00000397411 PSME2Q9UL46 239 aa23.7■■□□□ 1.38
TSPAN4-207ENST00000397411 CLDN16Q9Y5I7 305 aa23.7■■□□□ 1.38
TSPAN4-207ENST00000397411 TMEM120BA0PK00 339 aa23.69■■□□□ 1.38
TSPAN4-207ENST00000397411 C1orf226A1L170 272 aa23.69■■□□□ 1.38
TSPAN4-207ENST00000397411 WASHC1A8K0Z3 465 aa23.69■■□□□ 1.38
TSPAN4-207ENST00000397411 SEC22BO75396 215 aa23.69■■□□□ 1.38
TSPAN4-207ENST00000397411 FGF4P08620 206 aa23.69■■□□□ 1.38
TSPAN4-207ENST00000397411 SOX11P35716 441 aa23.69■■□□□ 1.38
TSPAN4-207ENST00000397411 STT3AP46977 705 aa23.69■■□□□ 1.38
TSPAN4-207ENST00000397411 ALDH9A1P49189 494 aa23.69■■□□□ 1.38
TSPAN4-207ENST00000397411 PLIN5Q00G26 463 aa23.69■■□□□ 1.38
TSPAN4-207ENST00000397411 MEP1AQ16819 746 aa23.69■■□□□ 1.38
TSPAN4-207ENST00000397411 AGBL2Q5U5Z8 902 aa23.69■■□□□ 1.38
TSPAN4-207ENST00000397411 KIF2BQ8N4N8 673 aa23.69■■□□□ 1.38
TSPAN4-207ENST00000397411 MORN4Q8NDC4 146 aa23.69■■□□□ 1.38
TSPAN4-207ENST00000397411 OR4K14Q8NGD5 310 aa23.69■■□□□ 1.38
TSPAN4-207ENST00000397411 ELP5Q8TE02 316 aa23.69■■□□□ 1.38
TSPAN4-207ENST00000397411 UCN3Q969E3 161 aa23.69■■□□□ 1.38
TSPAN4-207ENST00000397411 NCLNQ969V3 563 aa23.69■■□□□ 1.38
TSPAN4-207ENST00000397411 PPWD1Q96BP3 646 aaKnown RBP23.69■■□□□ 1.38
TSPAN4-207ENST00000397411 PELOQ9BRX2 385 aaKnown RBP23.69■■□□□ 1.38
TSPAN4-207ENST00000397411 EBPLQ9BY08 206 aa23.69■■□□□ 1.38
TSPAN4-207ENST00000397411 OR8D2Q9GZM6 311 aa23.69■■□□□ 1.38
TSPAN4-207ENST00000397411 ILKAPQ9H0C8 392 aaPredicted RBP23.69■■□□□ 1.38
TSPAN4-207ENST00000397411 CDCP1Q9H5V8 836 aa23.69■■□□□ 1.38
TSPAN4-207ENST00000397411 TLN1Q9Y490 2541 aaKnown RBP23.69■■□□□ 1.38
TSPAN4-207ENST00000397411 SPTA1P02549 2419 aa23.68■■□□□ 1.38
TSPAN4-207ENST00000397411 TRBV11-1A0A0K0K1C0 115 aa23.68■■□□□ 1.38
TSPAN4-207ENST00000397411 ANXA4P09525 319 aaPredicted RBP23.68■■□□□ 1.38
TSPAN4-207ENST00000397411 LINC00032P0C843 101 aa23.68■■□□□ 1.38
TSPAN4-207ENST00000397411 H2AFXP16104 143 aaPredicted RBP23.68■■□□□ 1.38
TSPAN4-207ENST00000397411 ACER2Q5QJU3 275 aa23.68■■□□□ 1.38
TSPAN4-207ENST00000397411 KANK2Q63ZY3 851 aa23.68■■□□□ 1.38
TSPAN4-207ENST00000397411 H3F3CQ6NXT2 135 aa23.68■■□□□ 1.38
TSPAN4-207ENST00000397411 IGFL2Q6UWQ7 119 aa23.68■■□□□ 1.38
TSPAN4-207ENST00000397411 PTPMT1Q8WUK0 201 aaPredicted RBP23.68■■□□□ 1.38
TSPAN4-207ENST00000397411 TLCD1Q96CP7 247 aa23.68■■□□□ 1.38
TSPAN4-207ENST00000397411 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP23.68■■□□□ 1.382e-7■■■■■ 28.9
TSPAN4-207ENST00000397411 B3GNT3Q9Y2A9 372 aa23.68■■□□□ 1.38
TSPAN4-207ENST00000397411 PCDHA9Q9Y5H5 950 aa23.68■■□□□ 1.38
TSPAN4-207ENST00000397411 CROCCQ5TZA2 2017 aa23.67■■□□□ 1.38
TSPAN4-207ENST00000397411 CNTRLQ7Z7A1 2325 aa23.67■■□□□ 1.38
TSPAN4-207ENST00000397411 TTLL8A6PVC2 850 aa23.67■■□□□ 1.38
TSPAN4-207ENST00000397411 TMEM114B3SHH9 223 aa23.67■■□□□ 1.38
TSPAN4-207ENST00000397411 RSL1D1O76021 490 aaKnown RBP23.67■■□□□ 1.38
TSPAN4-207ENST00000397411 DHRS4L1P0CG22 281 aa23.67■■□□□ 1.38
TSPAN4-207ENST00000397411 GRK2P25098 689 aa23.67■■□□□ 1.38
TSPAN4-207ENST00000397411 TIA1P31483 386 aaKnown RBP eCLIP23.67■■□□□ 1.38
TSPAN4-207ENST00000397411 CASRP41180 1078 aa23.67■■□□□ 1.38
TSPAN4-207ENST00000397411 IGLV3-21P80748 117 aaPredicted RBP23.67■■□□□ 1.38
TSPAN4-207ENST00000397411 SLC6A19Q695T7 634 aa23.67■■□□□ 1.38
TSPAN4-207ENST00000397411 RPS19BP1Q86WX3 136 aaKnown RBP23.67■■□□□ 1.38
TSPAN4-207ENST00000397411 CRLF3Q8IUI8 442 aa23.67■■□□□ 1.38
TSPAN4-207ENST00000397411 CDC26Q8NHZ8 85 aa23.67■■□□□ 1.38
TSPAN4-207ENST00000397411 PNPLA2Q96AD5 504 aa23.67■■□□□ 1.38
TSPAN4-207ENST00000397411 PFDN4Q9NQP4 134 aa23.67■■□□□ 1.38
TSPAN4-207ENST00000397411 LUZP4Q9P127 313 aa23.67■■□□□ 1.38
TSPAN4-207ENST00000397411 DLGAP4Q9Y2H0 992 aa23.67■■□□□ 1.38
TSPAN4-207ENST00000397411 TMEM233B4DJY2 109 aa23.66■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms