RNA–Protein interactions for RNA: ENST00000397406.5

TSPAN4-205, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN4, Length 1,426 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-205ENST00000397406 FBXO8Q9NRD0 319 aa15.96■□□□□ 0.15
TSPAN4-205ENST00000397406 C5AR2Q9P296 337 aa15.96■□□□□ 0.15
TSPAN4-205ENST00000397406 MAN2B2Q9Y2E5 1009 aa15.96■□□□□ 0.15
TSPAN4-205ENST00000397406 A0A1B0GX78 115 aa15.95■□□□□ 0.14
TSPAN4-205ENST00000397406 GLOD5A6NK44 160 aa15.95■□□□□ 0.14
TSPAN4-205ENST00000397406 WASHC1A8K0Z3 465 aa15.95■□□□□ 0.14
TSPAN4-205ENST00000397406 B4E171 279 aa15.95■□□□□ 0.14
TSPAN4-205ENST00000397406 FXYD1O00168 92 aa15.95■□□□□ 0.14
TSPAN4-205ENST00000397406 KRT16P08779 473 aa15.95■□□□□ 0.14
TSPAN4-205ENST00000397406 TSPAN7P41732 249 aa15.95■□□□□ 0.14
TSPAN4-205ENST00000397406 FRKP42685 505 aaPredicted RBP15.95■□□□□ 0.14
TSPAN4-205ENST00000397406 ART3Q13508 389 aa15.95■□□□□ 0.14
TSPAN4-205ENST00000397406 C3orf38Q5JPI3 329 aa15.95■□□□□ 0.14
TSPAN4-205ENST00000397406 ANXA8L1Q5VT79 327 aa15.95■□□□□ 0.14
TSPAN4-205ENST00000397406 C8orf82Q6P1X6 216 aaPredicted RBP15.95■□□□□ 0.14
TSPAN4-205ENST00000397406 PRMT9Q6P2P2 845 aa15.95■□□□□ 0.14
TSPAN4-205ENST00000397406 ANKRD46Q86W74 232 aa15.95■□□□□ 0.14
TSPAN4-205ENST00000397406 SPACA3Q8IXA5 215 aa15.95■□□□□ 0.14
TSPAN4-205ENST00000397406 DSELQ8IZU8 1212 aa15.95■□□□□ 0.14
TSPAN4-205ENST00000397406 TMEM52Q8NDY8 209 aa15.95■□□□□ 0.14
TSPAN4-205ENST00000397406 DNAJB14Q8TBM8 379 aa15.95■□□□□ 0.14
TSPAN4-205ENST00000397406 CIDECQ96AQ7 238 aaPredicted RBP15.95■□□□□ 0.14
TSPAN4-205ENST00000397406 EXOSC8Q96B26 276 aaKnown RBP15.95■□□□□ 0.14
TSPAN4-205ENST00000397406 MIEF2Q96C03 454 aa15.95■□□□□ 0.14
TSPAN4-205ENST00000397406 ROPN1LQ96C74 230 aa15.95■□□□□ 0.14
TSPAN4-205ENST00000397406 LIN37Q96GY3 246 aaPredicted RBP15.95■□□□□ 0.14
TSPAN4-205ENST00000397406 NAF1Q96HR8 494 aaKnown RBP15.95■□□□□ 0.14
TSPAN4-205ENST00000397406 SLC46A1Q96NT5 459 aa15.95■□□□□ 0.14
TSPAN4-205ENST00000397406 CMKLR1Q99788 373 aa15.95■□□□□ 0.14
TSPAN4-205ENST00000397406 RMND5AQ9H871 391 aa15.95■□□□□ 0.14
TSPAN4-205ENST00000397406 SDAD1Q9NVU7 687 aaKnown RBP eCLIP15.95■□□□□ 0.14
TSPAN4-205ENST00000397406 HCN3Q9P1Z3 774 aa15.95■□□□□ 0.14
TSPAN4-205ENST00000397406 NDOR1Q9UHB4 597 aa15.95■□□□□ 0.14
TSPAN4-205ENST00000397406 BTNL2Q9UIR0 455 aa15.95■□□□□ 0.14
TSPAN4-205ENST00000397406 PCDHB3Q9Y5E6 796 aa15.95■□□□□ 0.14
TSPAN4-205ENST00000397406 SPACA6W5XKT8 324 aa15.95■□□□□ 0.14
TSPAN4-205ENST00000397406 SEC16AO15027 2179 aa15.94■□□□□ 0.14
TSPAN4-205ENST00000397406 PRSS51A0A1B0GVH4 220 aa15.94■□□□□ 0.14
TSPAN4-205ENST00000397406 RNASET2O00584 256 aaKnown RBP15.94■□□□□ 0.14
TSPAN4-205ENST00000397406 POLR1CO15160 346 aaPredicted RBP15.94■□□□□ 0.14
TSPAN4-205ENST00000397406 SCRG1O75711 98 aa15.94■□□□□ 0.14
TSPAN4-205ENST00000397406 RNH1P13489 461 aaKnown RBP15.94■□□□□ 0.14
TSPAN4-205ENST00000397406 DDX5P17844 614 aaKnown RBP15.94■□□□□ 0.14
TSPAN4-205ENST00000397406 ALAS2P22557 587 aa15.94■□□□□ 0.14
TSPAN4-205ENST00000397406 TLX1P31314 330 aaPredicted RBP15.94■□□□□ 0.14
TSPAN4-205ENST00000397406 HNRNPFP52597 415 aaKnown RBP15.94■□□□□ 0.14
TSPAN4-205ENST00000397406 PCBP4P57723 403 aaKnown RBP15.94■□□□□ 0.14
TSPAN4-205ENST00000397406 MAT1AQ00266 395 aaKnown RBP15.94■□□□□ 0.14
TSPAN4-205ENST00000397406 ACTN3Q08043 901 aaPredicted RBP15.94■□□□□ 0.14
TSPAN4-205ENST00000397406 NFYCQ13952 458 aa15.94■□□□□ 0.14
TSPAN4-205ENST00000397406 SYT16Q17RD7 645 aa15.94■□□□□ 0.14
TSPAN4-205ENST00000397406 TRMT5Q32P41 509 aaKnown RBP15.94■□□□□ 0.14
TSPAN4-205ENST00000397406 LARP7Q4G0J3 582 aaKnown RBP eCLIP15.94■□□□□ 0.14
TSPAN4-205ENST00000397406 OR52E8Q6IFG1 317 aa15.94■□□□□ 0.14
TSPAN4-205ENST00000397406 IGF2-ASQ6U949 168 aa15.94■□□□□ 0.14
TSPAN4-205ENST00000397406 DLEU7Q6UYE1 221 aa15.94■□□□□ 0.14
TSPAN4-205ENST00000397406 TMEM126BQ8IUX1 230 aa15.94■□□□□ 0.14
TSPAN4-205ENST00000397406 CLECL1Q8IZS7 167 aa15.94■□□□□ 0.14
TSPAN4-205ENST00000397406 SLC38A9Q8NBW4 561 aa15.94■□□□□ 0.14
TSPAN4-205ENST00000397406 ZDHHC19Q8WVZ1 309 aaPredicted RBP15.94■□□□□ 0.14
TSPAN4-205ENST00000397406 ITCHQ96J02 903 aa15.94■□□□□ 0.14
TSPAN4-205ENST00000397406 CCDC115Q96NT0 180 aa15.94■□□□□ 0.14
TSPAN4-205ENST00000397406 CTRCQ99895 268 aa15.94■□□□□ 0.14
TSPAN4-205ENST00000397406 PAIP1Q9H074 479 aaKnown RBP15.94■□□□□ 0.14
TSPAN4-205ENST00000397406 RPF2Q9H7B2 306 aaKnown RBP15.94■□□□□ 0.14
TSPAN4-205ENST00000397406 ACTR5Q9H9F9 607 aaPredicted RBP15.94■□□□□ 0.14
TSPAN4-205ENST00000397406 WDR41Q9HAD4 459 aa15.94■□□□□ 0.14
TSPAN4-205ENST00000397406 SLAMF7Q9NQ25 335 aa15.94■□□□□ 0.14
TSPAN4-205ENST00000397406 SLC35C2Q9NQQ7 365 aa15.94■□□□□ 0.14
TSPAN4-205ENST00000397406 AKAP7Q9P0M2 348 aaPredicted RBP15.94■□□□□ 0.14
TSPAN4-205ENST00000397406 SLAMF8Q9P0V8 285 aa15.94■□□□□ 0.14
TSPAN4-205ENST00000397406 UTS2RQ9UKP6 389 aa15.94■□□□□ 0.14
TSPAN4-205ENST00000397406 CDC14AQ9UNH5 594 aa15.94■□□□□ 0.14
TSPAN4-205ENST00000397406 ERVK-11Q9UQG0 969 aa15.94■□□□□ 0.14
TSPAN4-205ENST00000397406 SSUH2Q9Y2M2 353 aa15.94■□□□□ 0.14
TSPAN4-205ENST00000397406 LOXL2Q9Y4K0 774 aa15.94■□□□□ 0.14
TSPAN4-205ENST00000397406 MAU2Q9Y6X3 613 aa15.94■□□□□ 0.14
TSPAN4-205ENST00000397406 CDRT15L2A8MXV6 281 aa15.94■□□□□ 0.14
TSPAN4-205ENST00000397406 FAM227AF5H4B4 570 aa15.94■□□□□ 0.14
TSPAN4-205ENST00000397406 GYG2O15488 501 aa15.94■□□□□ 0.14
TSPAN4-205ENST00000397406 PDPK1O15530 556 aa15.94■□□□□ 0.14
TSPAN4-205ENST00000397406 NPPAP01160 153 aa15.94■□□□□ 0.14
TSPAN4-205ENST00000397406 HOXB9P17482 250 aaPredicted RBP15.94■□□□□ 0.14
TSPAN4-205ENST00000397406 EFNA1P20827 205 aaPredicted RBP15.94■□□□□ 0.14
TSPAN4-205ENST00000397406 PTPN6P29350 595 aa15.94■□□□□ 0.14
TSPAN4-205ENST00000397406 CDKN2CP42773 168 aa15.94■□□□□ 0.14
TSPAN4-205ENST00000397406 OR1D4P47884 311 aa15.94■□□□□ 0.14
TSPAN4-205ENST00000397406 PLIN5Q00G26 463 aa15.94■□□□□ 0.14
TSPAN4-205ENST00000397406 DSG2Q14126 1118 aa15.94■□□□□ 0.14
TSPAN4-205ENST00000397406 LRIF1Q5T3J3 769 aa15.94■□□□□ 0.14
TSPAN4-205ENST00000397406 FAM180BQ6P0A1 224 aa15.94■□□□□ 0.14
TSPAN4-205ENST00000397406 DHDDSQ86SQ9 333 aa15.94■□□□□ 0.14
TSPAN4-205ENST00000397406 PGAM4Q8N0Y7 254 aa15.94■□□□□ 0.14
TSPAN4-205ENST00000397406 NATD1Q8N6N6 113 aa15.94■□□□□ 0.14
TSPAN4-205ENST00000397406 OR51Q1Q8NH59 317 aa15.94■□□□□ 0.14
TSPAN4-205ENST00000397406 ADAMTS18Q8TE60 1221 aa15.94■□□□□ 0.14
TSPAN4-205ENST00000397406 KLHL29Q96CT2 875 aa15.94■□□□□ 0.14
TSPAN4-205ENST00000397406 LRRC58Q96CX6 371 aa15.94■□□□□ 0.14
TSPAN4-205ENST00000397406 CNRIP1Q96F85 164 aaPredicted RBP15.94■□□□□ 0.14
TSPAN4-205ENST00000397406 PEX11GQ96HA9 241 aa15.94■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms