RNA–Protein interactions for RNA: ENST00000397397.6

TSPAN4-203, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN4, Length 1,423 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-203ENST00000397397 KLHL29Q96CT2 875 aa22.18■■□□□ 1.14
TSPAN4-203ENST00000397397 MTERF3Q96E29 417 aa22.18■■□□□ 1.14
TSPAN4-203ENST00000397397 NAF1Q96HR8 494 aaKnown RBP22.18■■□□□ 1.14
TSPAN4-203ENST00000397397 PTCHD1Q96NR3 888 aa22.18■■□□□ 1.14
TSPAN4-203ENST00000397397 ZBTB18Q99592 522 aa22.18■■□□□ 1.14
TSPAN4-203ENST00000397397 ZNF385DQ9H6B1 395 aa22.18■■□□□ 1.14
TSPAN4-203ENST00000397397 CCDC86Q9H6F5 360 aaKnown RBP22.18■■□□□ 1.14
TSPAN4-203ENST00000397397 GPN2Q9H9Y4 310 aaPredicted RBP22.18■■□□□ 1.14
TSPAN4-203ENST00000397397 EHD3Q9NZN3 535 aa22.18■■□□□ 1.14
TSPAN4-203ENST00000397397 SH3BP4Q9P0V3 963 aa22.18■■□□□ 1.14
TSPAN4-203ENST00000397397 ATP6V1HQ9UI12 483 aa22.18■■□□□ 1.14
TSPAN4-203ENST00000397397 C3orf18Q9UK00 162 aa22.18■■□□□ 1.14
TSPAN4-203ENST00000397397 KCND3Q9UK17 655 aa22.18■■□□□ 1.14
TSPAN4-203ENST00000397397 UTS2RQ9UKP6 389 aa22.18■■□□□ 1.14
TSPAN4-203ENST00000397397 TCFL5Q9UL49 500 aa22.18■■□□□ 1.14
TSPAN4-203ENST00000397397 CROCCQ5TZA2 2017 aa22.18■■□□□ 1.14
TSPAN4-203ENST00000397397 WDFY3Q8IZQ1 3526 aa22.17■■□□□ 1.14
TSPAN4-203ENST00000397397 GABRR3A8MPY1 467 aa22.17■■□□□ 1.14
TSPAN4-203ENST00000397397 IDSB3KWA1 339 aa22.17■■□□□ 1.14
TSPAN4-203ENST00000397397 TLX3O43711 291 aaPredicted RBP22.17■■□□□ 1.14
TSPAN4-203ENST00000397397 FGF17O60258 216 aa22.17■■□□□ 1.14
TSPAN4-203ENST00000397397 ERAL1O75616 437 aaKnown RBP22.17■■□□□ 1.14
TSPAN4-203ENST00000397397 RECKO95980 971 aa22.17■■□□□ 1.14
TSPAN4-203ENST00000397397 MAOAP21397 527 aa22.17■■□□□ 1.14
TSPAN4-203ENST00000397397 GPX3P22352 226 aa22.17■■□□□ 1.14
TSPAN4-203ENST00000397397 PPP2R1BP30154 601 aa22.17■■□□□ 1.14
TSPAN4-203ENST00000397397 MRPL19P49406 292 aaKnown RBP22.17■■□□□ 1.14
TSPAN4-203ENST00000397397 CLNS1AP54105 237 aaKnown RBP22.17■■□□□ 1.14
TSPAN4-203ENST00000397397 C21orf58P58505 322 aa22.17■■□□□ 1.14
TSPAN4-203ENST00000397397 ID2Q02363 134 aa22.17■■□□□ 1.14
TSPAN4-203ENST00000397397 FOLH1Q04609 750 aa22.17■■□□□ 1.14
TSPAN4-203ENST00000397397 PDE7AQ13946 482 aa22.17■■□□□ 1.14
TSPAN4-203ENST00000397397 PAOXQ6QHF9 649 aa22.17■■□□□ 1.14
TSPAN4-203ENST00000397397 SCUBE1Q8IWY4 988 aa22.17■■□□□ 1.14
TSPAN4-203ENST00000397397 OR7A2PQ8NGA2 310 aa22.17■■□□□ 1.14
TSPAN4-203ENST00000397397 OR4K14Q8NGD5 310 aa22.17■■□□□ 1.14
TSPAN4-203ENST00000397397 STARD8Q92502 1023 aa22.17■■□□□ 1.14
TSPAN4-203ENST00000397397 ANKRD9Q96BM1 317 aaPredicted RBP22.17■■□□□ 1.14
TSPAN4-203ENST00000397397 PPCDCQ96CD2 204 aa22.17■■□□□ 1.14
TSPAN4-203ENST00000397397 TEX37Q96LM6 180 aa22.17■■□□□ 1.14
TSPAN4-203ENST00000397397 FAM117AQ9C073 453 aa22.17■■□□□ 1.14
TSPAN4-203ENST00000397397 NECTIN3Q9NQS3 549 aa22.17■■□□□ 1.14
TSPAN4-203ENST00000397397 AHCTF1Q8WYP5 2266 aa22.17■■□□□ 1.14
TSPAN4-203ENST00000397397 GPR75O95800 540 aa22.16■■□□□ 1.14
TSPAN4-203ENST00000397397 PIK3R1P27986 724 aa22.16■■□□□ 1.14
TSPAN4-203ENST00000397397 EFNA3P52797 238 aa22.16■■□□□ 1.14
TSPAN4-203ENST00000397397 STX4Q12846 297 aa22.16■■□□□ 1.14
TSPAN4-203ENST00000397397 CLN3Q13286 438 aa22.16■■□□□ 1.14
TSPAN4-203ENST00000397397 UGT8Q16880 541 aa22.16■■□□□ 1.14
TSPAN4-203ENST00000397397 FAAH2Q6GMR7 532 aa22.16■■□□□ 1.14
TSPAN4-203ENST00000397397 VASH2Q86V25 355 aa22.16■■□□□ 1.14
TSPAN4-203ENST00000397397 CPSF7Q8N684 471 aaKnown RBP22.16■■□□□ 1.14
TSPAN4-203ENST00000397397 CCDC197Q8NCU1 140 aa22.16■■□□□ 1.14
TSPAN4-203ENST00000397397 PLPP5Q8NEB5 264 aa22.16■■□□□ 1.14
TSPAN4-203ENST00000397397 KCNE4Q8WWG9 221 aa22.16■■□□□ 1.14
TSPAN4-203ENST00000397397 ZCCHC14Q8WYQ9 949 aaKnown RBP22.16■■□□□ 1.14
TSPAN4-203ENST00000397397 TSLPQ969D9 159 aa22.16■■□□□ 1.14
TSPAN4-203ENST00000397397 PRPF18Q99633 342 aaKnown RBP22.16■■□□□ 1.14
TSPAN4-203ENST00000397397 SAR1AQ9NR31 198 aa22.16■■□□□ 1.14
TSPAN4-203ENST00000397397 DKK4Q9UBT3 224 aa22.16■■□□□ 1.14
TSPAN4-203ENST00000397397 ZMIZ1Q9ULJ6 1067 aa22.16■■□□□ 1.14
TSPAN4-203ENST00000397397 MAP1BP46821 2468 aaKnown RBP22.16■■□□□ 1.14
TSPAN4-203ENST00000397397 MYOCOSA0A1B0GUC4 107 aa22.15■■□□□ 1.14
TSPAN4-203ENST00000397397 C9JVG2 144 aa22.15■■□□□ 1.14
TSPAN4-203ENST00000397397 TBX19O60806 448 aa22.15■■□□□ 1.14
TSPAN4-203ENST00000397397 CCDC22O60826 627 aa22.15■■□□□ 1.14
TSPAN4-203ENST00000397397 UMODP07911 640 aa22.15■■□□□ 1.14
TSPAN4-203ENST00000397397 LIFP15018 202 aa22.15■■□□□ 1.14
TSPAN4-203ENST00000397397 DDX5P17844 614 aaKnown RBP22.15■■□□□ 1.14
TSPAN4-203ENST00000397397 IL12AP29459 219 aa22.15■■□□□ 1.14
TSPAN4-203ENST00000397397 PRSS53Q2L4Q9 553 aa22.15■■□□□ 1.14
TSPAN4-203ENST00000397397 PGS1Q32NB8 556 aa22.15■■□□□ 1.14
TSPAN4-203ENST00000397397 CPTPQ5TA50 214 aa22.15■■□□□ 1.14
TSPAN4-203ENST00000397397 ZNF248Q8NDW4 579 aa22.15■■□□□ 1.14
TSPAN4-203ENST00000397397 OR9I1Q8NGQ6 314 aa22.15■■□□□ 1.14
TSPAN4-203ENST00000397397 SNIP1Q8TAD8 396 aaKnown RBP22.15■■□□□ 1.14
TSPAN4-203ENST00000397397 NMUR2Q9GZQ4 415 aa22.15■■□□□ 1.14
TSPAN4-203ENST00000397397 CLMPQ9H6B4 373 aa22.15■■□□□ 1.14
TSPAN4-203ENST00000397397 SLC35C2Q9NQQ7 365 aa22.15■■□□□ 1.14
TSPAN4-203ENST00000397397 GIMAP4Q9NUV9 329 aa22.15■■□□□ 1.14
TSPAN4-203ENST00000397397 IL17BQ9UHF5 180 aa22.15■■□□□ 1.14
TSPAN4-203ENST00000397397 PCDHGA6Q9Y5G7 932 aa22.15■■□□□ 1.14
TSPAN4-203ENST00000397397 MRPS18BQ9Y676 258 aaKnown RBP22.15■■□□□ 1.14
TSPAN4-203ENST00000397397 ZNF780BQ9Y6R6 833 aa22.15■■□□□ 1.14
TSPAN4-203ENST00000397397 TGFBR3LH3BV60 316 aa22.14■■□□□ 1.14
TSPAN4-203ENST00000397397 FCHO1O14526 889 aa22.14■■□□□ 1.14
TSPAN4-203ENST00000397397 ALOX12BO75342 701 aa22.14■■□□□ 1.14
TSPAN4-203ENST00000397397 C8orf89P0DMQ9 161 aa22.14■■□□□ 1.14
TSPAN4-203ENST00000397397 UBAP2LQ14157 1087 aaKnown RBP22.14■■□□□ 1.14
TSPAN4-203ENST00000397397 NSDHLQ15738 373 aa22.14■■□□□ 1.14
TSPAN4-203ENST00000397397 AGKQ53H12 422 aa22.14■■□□□ 1.14
TSPAN4-203ENST00000397397 ZNF385BQ569K4 471 aa22.14■■□□□ 1.14
TSPAN4-203ENST00000397397 FAM180BQ6P0A1 224 aa22.14■■□□□ 1.14
TSPAN4-203ENST00000397397 MTDHQ86UE4 582 aaKnown RBP22.14■■□□□ 1.14
TSPAN4-203ENST00000397397 GLB1L3Q8NCI6 653 aaPredicted RBP22.14■■□□□ 1.14
TSPAN4-203ENST00000397397 METTL21AQ8WXB1 218 aa22.14■■□□□ 1.14
TSPAN4-203ENST00000397397 TESCQ96BS2 214 aa22.14■■□□□ 1.14
TSPAN4-203ENST00000397397 ZNF764Q96H86 408 aaPredicted RBP22.14■■□□□ 1.14
TSPAN4-203ENST00000397397 EFHD1Q9BUP0 239 aa22.14■■□□□ 1.14
TSPAN4-203ENST00000397397 ALOXE3Q9BYJ1 711 aa22.14■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms