RNA–Protein interactions for RNA: ENST00000397378.7

NEDD9-203, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 3

Gene NEDD9, Length 470 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-203ENST00000397378 ZNF10P21506 573 aaPredicted RBP8.64□□□□□ -1.03
NEDD9-203ENST00000397378 PIGAP37287 484 aa8.64□□□□□ -1.03
NEDD9-203ENST00000397378 CPA2P48052 419 aa8.64□□□□□ -1.03
NEDD9-203ENST00000397378 ATP5J2P56134 94 aa8.64□□□□□ -1.03
NEDD9-203ENST00000397378 EFTUD2Q15029 972 aaKnown RBP eCLIP8.64□□□□□ -1.03
NEDD9-203ENST00000397378 RBBP5Q15291 538 aaKnown RBP8.64□□□□□ -1.03
NEDD9-203ENST00000397378 SF3B4Q15427 424 aaKnown RBP eCLIP8.64□□□□□ -1.03
NEDD9-203ENST00000397378 CLEC12BQ2HXU8 276 aa8.64□□□□□ -1.03
NEDD9-203ENST00000397378 PIGGQ5H8A4 983 aa8.64□□□□□ -1.03
NEDD9-203ENST00000397378 NXPE4Q6UWF7 544 aa8.64□□□□□ -1.03
NEDD9-203ENST00000397378 GSTA5Q7RTV2 222 aa8.64□□□□□ -1.03
NEDD9-203ENST00000397378 TMPRSS11BQ86T26 416 aa8.64□□□□□ -1.03
NEDD9-203ENST00000397378 TXLNBQ8N3L3 684 aa8.64□□□□□ -1.03
NEDD9-203ENST00000397378 TTLQ8NG68 377 aa8.64□□□□□ -1.03
NEDD9-203ENST00000397378 SLC2A12Q8TD20 617 aa8.64□□□□□ -1.03
NEDD9-203ENST00000397378 PAQR8Q8TEZ7 354 aa8.64□□□□□ -1.03
NEDD9-203ENST00000397378 MS4A6EQ96DS6 147 aa8.64□□□□□ -1.03
NEDD9-203ENST00000397378 HSPBAP1Q96EW2 488 aa8.64□□□□□ -1.03
NEDD9-203ENST00000397378 LINGO1Q96FE5 620 aa8.64□□□□□ -1.03
NEDD9-203ENST00000397378 PIK3IP1Q96FE7 263 aa8.64□□□□□ -1.03
NEDD9-203ENST00000397378 TSNARE1Q96NA8 513 aa8.64□□□□□ -1.03
NEDD9-203ENST00000397378 QRFPRQ96P65 431 aa8.64□□□□□ -1.03
NEDD9-203ENST00000397378 RBM24Q9BX46 236 aaKnown RBP8.64□□□□□ -1.03
NEDD9-203ENST00000397378 ALOXE3Q9BYJ1 711 aa8.64□□□□□ -1.03
NEDD9-203ENST00000397378 TRIM5Q9C035 493 aa8.64□□□□□ -1.03
NEDD9-203ENST00000397378 OR8D2Q9GZM6 311 aa8.64□□□□□ -1.03
NEDD9-203ENST00000397378 SLC6A15Q9H2J7 730 aa8.64□□□□□ -1.03
NEDD9-203ENST00000397378 PROK2Q9HC23 129 aa8.64□□□□□ -1.03
NEDD9-203ENST00000397378 RYDENQ9NUL5 291 aaKnown RBP8.64□□□□□ -1.03
NEDD9-203ENST00000397378 JKAMPQ9P055 326 aa8.64□□□□□ -1.03
NEDD9-203ENST00000397378 DYRK1BQ9Y463 629 aa8.64□□□□□ -1.03
NEDD9-203ENST00000397378 LRIT2A6NDA9 550 aa8.63□□□□□ -1.03
NEDD9-203ENST00000397378 LRRC3CA6NJW4 275 aa8.63□□□□□ -1.03
NEDD9-203ENST00000397378 KDM4EB2RXH2 506 aaPredicted RBP8.63□□□□□ -1.03
NEDD9-203ENST00000397378 ERI3O43414 337 aaKnown RBP8.63□□□□□ -1.03
NEDD9-203ENST00000397378 B3GALT2O43825 422 aa8.63□□□□□ -1.03
NEDD9-203ENST00000397378 SOX30O94993 753 aa8.63□□□□□ -1.03
NEDD9-203ENST00000397378 IL18BPO95998 194 aa8.63□□□□□ -1.03
NEDD9-203ENST00000397378 ENO2P09104 434 aaPredicted RBP8.63□□□□□ -1.03
NEDD9-203ENST00000397378 SAT1P21673 171 aa8.63□□□□□ -1.03
NEDD9-203ENST00000397378 GSTM2P28161 218 aa8.63□□□□□ -1.03
NEDD9-203ENST00000397378 HNRNPH1P31943 449 aaKnown RBP8.63□□□□□ -1.03
NEDD9-203ENST00000397378 OPRM1P35372 400 aa8.63□□□□□ -1.03
NEDD9-203ENST00000397378 LIM2P55344 173 aa8.63□□□□□ -1.03
NEDD9-203ENST00000397378 IL2P60568 153 aa8.63□□□□□ -1.03
NEDD9-203ENST00000397378 KCNJ2P63252 427 aa8.63□□□□□ -1.03
NEDD9-203ENST00000397378 CRYZQ08257 329 aaKnown RBP8.63□□□□□ -1.03
NEDD9-203ENST00000397378 SERTAD2Q14140 314 aa8.63□□□□□ -1.03
NEDD9-203ENST00000397378 RCN2Q14257 317 aa8.63□□□□□ -1.03
NEDD9-203ENST00000397378 ADPRMQ3LIE5 342 aa8.63□□□□□ -1.03
NEDD9-203ENST00000397378 NSUN5P2Q63ZY6 315 aa8.63□□□□□ -1.03
NEDD9-203ENST00000397378 CLNKQ7Z7G1 428 aa8.63□□□□□ -1.03
NEDD9-203ENST00000397378 LUZP2Q86TE4 346 aa8.63□□□□□ -1.03
NEDD9-203ENST00000397378 THOC6Q86W42 341 aaKnown RBP8.63□□□□□ -1.03
NEDD9-203ENST00000397378 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP8.63□□□□□ -1.03
NEDD9-203ENST00000397378 KLHDC8AQ8IYD2 350 aa8.63□□□□□ -1.03
NEDD9-203ENST00000397378 PM20D2Q8IYS1 436 aa8.63□□□□□ -1.03
NEDD9-203ENST00000397378 DND1Q8IYX4 353 aaKnown RBP8.63□□□□□ -1.03
NEDD9-203ENST00000397378 LIX1Q8N485 282 aa8.63□□□□□ -1.03
NEDD9-203ENST00000397378 RNF10Q8N5U6 811 aaKnown RBP8.63□□□□□ -1.03
NEDD9-203ENST00000397378 SLC15A4Q8N697 577 aa8.63□□□□□ -1.03
NEDD9-203ENST00000397378 ZNF321PQ8N8H1 164 aa8.63□□□□□ -1.03
NEDD9-203ENST00000397378 FAM47BQ8NA70 645 aa8.63□□□□□ -1.03
NEDD9-203ENST00000397378 C2CD4AQ8NCU7 369 aaPredicted RBP8.63□□□□□ -1.03
NEDD9-203ENST00000397378 C7orf57Q8NEG2 295 aa8.63□□□□□ -1.03
NEDD9-203ENST00000397378 NUBPLQ8TB37 319 aa8.63□□□□□ -1.03
NEDD9-203ENST00000397378 ZNF721Q8TF20 911 aa8.63□□□□□ -1.03
NEDD9-203ENST00000397378 TMEM171Q8WVE6 324 aa8.63□□□□□ -1.03
NEDD9-203ENST00000397378 ZBED6CLQ96FA7 236 aaPredicted RBP8.63□□□□□ -1.03
NEDD9-203ENST00000397378 SERINC2Q96SA4 455 aa8.63□□□□□ -1.03
NEDD9-203ENST00000397378 NDNQ99608 321 aa8.63□□□□□ -1.03
NEDD9-203ENST00000397378 FAM167BQ9BTA0 163 aa8.63□□□□□ -1.03
NEDD9-203ENST00000397378 BEX2Q9BXY8 128 aa8.63□□□□□ -1.03
NEDD9-203ENST00000397378 REG4Q9BYZ8 158 aa8.63□□□□□ -1.03
NEDD9-203ENST00000397378 PRDM14Q9GZV8 571 aa8.63□□□□□ -1.03
NEDD9-203ENST00000397378 TSPY26PQ9H489 355 aa8.63□□□□□ -1.03
NEDD9-203ENST00000397378 XAB2Q9HCS7 855 aaKnown RBP8.63□□□□□ -1.03
NEDD9-203ENST00000397378 C20orf96Q9NUD7 363 aaPredicted RBP8.63□□□□□ -1.03
NEDD9-203ENST00000397378 GALNT8Q9NY28 637 aa8.63□□□□□ -1.03
NEDD9-203ENST00000397378 CNIH4Q9P003 139 aa8.63□□□□□ -1.03
NEDD9-203ENST00000397378 NDRG3Q9UGV2 375 aa8.63□□□□□ -1.03
NEDD9-203ENST00000397378 DAPP1Q9UN19 280 aa8.63□□□□□ -1.03
NEDD9-203ENST00000397378 KCNE2Q9Y6J6 123 aa8.63□□□□□ -1.03
NEDD9-203ENST00000397378 A0A0G2JN53 185 aa8.62□□□□□ -1.03
NEDD9-203ENST00000397378 MBD3L3A6NE82 208 aaPredicted RBP8.62□□□□□ -1.03
NEDD9-203ENST00000397378 CD8B2A6NJW9 211 aa8.62□□□□□ -1.03
NEDD9-203ENST00000397378 C17orf105B2RV13 164 aa8.62□□□□□ -1.03
NEDD9-203ENST00000397378 ERN1O75460 977 aaKnown RBP8.62□□□□□ -1.03
NEDD9-203ENST00000397378 GUCA1CO95843 209 aa8.62□□□□□ -1.03
NEDD9-203ENST00000397378 C1QAP02745 245 aa8.62□□□□□ -1.03
NEDD9-203ENST00000397378 CTSSP25774 331 aa8.62□□□□□ -1.03
NEDD9-203ENST00000397378 HPDP32754 393 aaPredicted RBP8.62□□□□□ -1.03
NEDD9-203ENST00000397378 MAGEA3P43357 314 aa8.62□□□□□ -1.03
NEDD9-203ENST00000397378 KCNJ1P48048 391 aa8.62□□□□□ -1.03
NEDD9-203ENST00000397378 CDKN2DP55273 166 aa8.62□□□□□ -1.03
NEDD9-203ENST00000397378 ASPHQ12797 758 aa8.62□□□□□ -1.03
NEDD9-203ENST00000397378 STX4Q12846 297 aa8.62□□□□□ -1.03
NEDD9-203ENST00000397378 DUSP8Q13202 625 aa8.62□□□□□ -1.03
NEDD9-203ENST00000397378 PDLIM3Q53GG5 364 aaPredicted RBP8.62□□□□□ -1.03
NEDD9-203ENST00000397378 HSP90AA5PQ58FG0 334 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms