RNA–Protein interactions for RNA: ENST00000397204.8

CAPN3-208, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,237 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-208ENST00000397204 PGGT1BP53609 377 aa8.09□□□□□ -1.11
CAPN3-208ENST00000397204 PLA2G16P53816 162 aa8.09□□□□□ -1.11
CAPN3-208ENST00000397204 MTTPP55157 894 aa8.09□□□□□ -1.11
CAPN3-208ENST00000397204 LIM2P55344 173 aa8.09□□□□□ -1.11
CAPN3-208ENST00000397204 TGM3Q08188 693 aa8.09□□□□□ -1.11
CAPN3-208ENST00000397204 STX4Q12846 297 aa8.09□□□□□ -1.11
CAPN3-208ENST00000397204 BIKQ13323 160 aa8.09□□□□□ -1.11
CAPN3-208ENST00000397204 SERTAD2Q14140 314 aa8.09□□□□□ -1.11
CAPN3-208ENST00000397204 FRG1Q14331 258 aaKnown RBP8.09□□□□□ -1.11
CAPN3-208ENST00000397204 MPEG1Q2M385 716 aa8.09□□□□□ -1.11
CAPN3-208ENST00000397204 PIGGQ5H8A4 983 aa8.09□□□□□ -1.11
CAPN3-208ENST00000397204 C1orf185Q5T7R7 199 aa8.09□□□□□ -1.11
CAPN3-208ENST00000397204 RIPPLY2Q5TAB7 128 aa8.09□□□□□ -1.11
CAPN3-208ENST00000397204 TRIM40Q6P9F5 258 aa8.09□□□□□ -1.11
CAPN3-208ENST00000397204 ABHD17CQ6PCB6 329 aa8.09□□□□□ -1.11
CAPN3-208ENST00000397204 FAM47EQ6ZV65 393 aa8.09□□□□□ -1.11
CAPN3-208ENST00000397204 CAMKMTQ7Z624 323 aa8.09□□□□□ -1.11
CAPN3-208ENST00000397204 GAS2L3Q86XJ1 694 aa8.09□□□□□ -1.11
CAPN3-208ENST00000397204 LIX1LQ8IVB5 337 aa8.09□□□□□ -1.11
CAPN3-208ENST00000397204 IGDCC3Q8IVU1 814 aa8.09□□□□□ -1.11
CAPN3-208ENST00000397204 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP8.09□□□□□ -1.11
CAPN3-208ENST00000397204 SRFBP1Q8NEF9 429 aaKnown RBP8.09□□□□□ -1.11
CAPN3-208ENST00000397204 CCT6BQ92526 530 aa8.09□□□□□ -1.11
CAPN3-208ENST00000397204 NRGNQ92686 78 aa8.09□□□□□ -1.11
CAPN3-208ENST00000397204 LRRC46Q96FV0 321 aa8.09□□□□□ -1.11
CAPN3-208ENST00000397204 MS4A14Q96JA4 679 aa8.09□□□□□ -1.11
CAPN3-208ENST00000397204 EGFL8Q99944 293 aa8.09□□□□□ -1.11
CAPN3-208ENST00000397204 ROGDIQ9GZN7 287 aa8.09□□□□□ -1.11
CAPN3-208ENST00000397204 REXO4Q9GZR2 422 aaKnown RBP8.09□□□□□ -1.11
CAPN3-208ENST00000397204 EHD1Q9H4M9 534 aa8.09□□□□□ -1.11
CAPN3-208ENST00000397204 LDAHQ9H6V9 325 aa8.09□□□□□ -1.11
CAPN3-208ENST00000397204 RASSF1Q9NS23 344 aa8.09□□□□□ -1.11
CAPN3-208ENST00000397204 ALKBH4Q9NXW9 302 aa8.09□□□□□ -1.11
CAPN3-208ENST00000397204 GPRC5BQ9NZH0 403 aa8.09□□□□□ -1.11
CAPN3-208ENST00000397204 OARD1Q9Y530 152 aa8.09□□□□□ -1.11
CAPN3-208ENST00000397204 PHF3Q92576 2039 aaKnown RBP8.08□□□□□ -1.12
CAPN3-208ENST00000397204 HRNRQ86YZ3 2850 aaPredicted RBP8.08□□□□□ -1.12
CAPN3-208ENST00000397204 TRGV5A0A0B4J1U4 118 aa8.08□□□□□ -1.12
CAPN3-208ENST00000397204 A0A0G2JMM0 328 aa8.08□□□□□ -1.12
CAPN3-208ENST00000397204 A0A0G2JN53 185 aa8.08□□□□□ -1.12
CAPN3-208ENST00000397204 A0A1W2PPB8 328 aa8.08□□□□□ -1.12
CAPN3-208ENST00000397204 A0A1W2PRS3 328 aa8.08□□□□□ -1.12
CAPN3-208ENST00000397204 HSPB2A8KAH6 182 aa8.08□□□□□ -1.12
CAPN3-208ENST00000397204 KIR3DP1A8MWS1 328 aa8.08□□□□□ -1.12
CAPN3-208ENST00000397204 C17orf105B2RV13 164 aa8.08□□□□□ -1.12
CAPN3-208ENST00000397204 G3V3Y1 287 aa8.08□□□□□ -1.12
CAPN3-208ENST00000397204 PGRMC1O00264 195 aaKnown RBP8.08□□□□□ -1.12
CAPN3-208ENST00000397204 CDC7O00311 574 aa8.08□□□□□ -1.12
CAPN3-208ENST00000397204 DNALI1O14645 258 aaPredicted RBP8.08□□□□□ -1.12
CAPN3-208ENST00000397204 PROM1O43490 865 aa8.08□□□□□ -1.12
CAPN3-208ENST00000397204 NRDCO43847 1150 aa8.08□□□□□ -1.12
CAPN3-208ENST00000397204 WDR47O94967 919 aa8.08□□□□□ -1.12
CAPN3-208ENST00000397204 TBX6O95947 436 aaPredicted RBP8.08□□□□□ -1.12
CAPN3-208ENST00000397204 ZNF37AP17032 561 aaPredicted RBP8.08□□□□□ -1.12
CAPN3-208ENST00000397204 GGT5P36269 586 aa8.08□□□□□ -1.12
CAPN3-208ENST00000397204 GDF5P43026 501 aa8.08□□□□□ -1.12
CAPN3-208ENST00000397204 SLC6A12P48065 614 aa8.08□□□□□ -1.12
CAPN3-208ENST00000397204 KCNC1P48547 511 aa8.08□□□□□ -1.12
CAPN3-208ENST00000397204 ILF2Q12905 390 aaKnown RBP8.08□□□□□ -1.12
CAPN3-208ENST00000397204 SLBPQ14493 270 aaKnown RBP eCLIP8.08□□□□□ -1.12
CAPN3-208ENST00000397204 DAZAP2Q15038 168 aaPredicted RBP8.08□□□□□ -1.12
CAPN3-208ENST00000397204 PPP1R7Q15435 360 aa8.08□□□□□ -1.12
CAPN3-208ENST00000397204 HSPB2Q16082 182 aa8.08□□□□□ -1.12
CAPN3-208ENST00000397204 CDKL4Q5MAI5 379 aa8.08□□□□□ -1.12
CAPN3-208ENST00000397204 SLC22A10Q63ZE4 541 aa8.08□□□□□ -1.12
CAPN3-208ENST00000397204 CLNKQ7Z7G1 428 aa8.08□□□□□ -1.12
CAPN3-208ENST00000397204 ADAMTSL2Q86TH1 951 aa8.08□□□□□ -1.12
CAPN3-208ENST00000397204 ZZZ3Q8IYH5 903 aa8.08□□□□□ -1.12
CAPN3-208ENST00000397204 PDIK1LQ8N165 341 aa8.08□□□□□ -1.12
CAPN3-208ENST00000397204 SLC15A4Q8N697 577 aa8.08□□□□□ -1.12
CAPN3-208ENST00000397204 FAM47BQ8NA70 645 aa8.08□□□□□ -1.12
CAPN3-208ENST00000397204 GOT1L1Q8NHS2 421 aaPredicted RBP8.08□□□□□ -1.12
CAPN3-208ENST00000397204 ACTRT1Q8TDG2 376 aa8.08□□□□□ -1.12
CAPN3-208ENST00000397204 FAM222BQ8WU58 562 aa8.08□□□□□ -1.12
CAPN3-208ENST00000397204 RHBDF1Q96CC6 855 aa8.08□□□□□ -1.12
CAPN3-208ENST00000397204 LRRC39Q96DD0 335 aa8.08□□□□□ -1.12
CAPN3-208ENST00000397204 MBD6Q96DN6 1003 aa8.08□□□□□ -1.12
CAPN3-208ENST00000397204 VPS39Q96JC1 886 aa8.08□□□□□ -1.12
CAPN3-208ENST00000397204 KCNC2Q96PR1 638 aa8.08□□□□□ -1.12
CAPN3-208ENST00000397204 ALPK1Q96QP1 1244 aa8.08□□□□□ -1.12
CAPN3-208ENST00000397204 TBCDQ9BTW9 1192 aa8.08□□□□□ -1.12
CAPN3-208ENST00000397204 OR8D2Q9GZM6 311 aa8.08□□□□□ -1.12
CAPN3-208ENST00000397204 CLEC4MQ9H2X3 399 aaPredicted RBP8.08□□□□□ -1.12
CAPN3-208ENST00000397204 LIME1Q9H400 295 aa8.08□□□□□ -1.12
CAPN3-208ENST00000397204 COPS7BQ9H9Q2 264 aaPredicted RBP8.08□□□□□ -1.12
CAPN3-208ENST00000397204 PLAC1Q9HBJ0 212 aa8.08□□□□□ -1.12
CAPN3-208ENST00000397204 LYRM4Q9HD34 91 aa8.08□□□□□ -1.12
CAPN3-208ENST00000397204 ACKR4Q9NPB9 350 aa8.08□□□□□ -1.12
CAPN3-208ENST00000397204 PRDM7Q9NQW5 492 aa8.08□□□□□ -1.12
CAPN3-208ENST00000397204 QPCTLQ9NXS2 382 aa8.08□□□□□ -1.12
CAPN3-208ENST00000397204 TUBA8Q9NY65 449 aaPredicted RBP8.08□□□□□ -1.12
CAPN3-208ENST00000397204 NOP53Q9NZM5 478 aaKnown RBP8.08□□□□□ -1.12
CAPN3-208ENST00000397204 CNIH4Q9P003 139 aa8.08□□□□□ -1.12
CAPN3-208ENST00000397204 CTNNAL1Q9UBT7 734 aa8.08□□□□□ -1.12
CAPN3-208ENST00000397204 IKZF3Q9UKT9 509 aa8.08□□□□□ -1.12
CAPN3-208ENST00000397204 ZNF490Q9ULM2 529 aaPredicted RBP8.08□□□□□ -1.12
CAPN3-208ENST00000397204 ATG4BQ9Y4P1 393 aa8.08□□□□□ -1.12
CAPN3-208ENST00000397204 SEC23IPQ9Y6Y8 1000 aaKnown RBP8.08□□□□□ -1.12
CAPN3-208ENST00000397204 NSD1Q96L73 2696 aaPredicted RBP8.07□□□□□ -1.12
CAPN3-208ENST00000397204 MYOCOSA0A1B0GUC4 107 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms