RNA–Protein interactions for RNA: ENST00000395969.6

VPS41-203, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5 BASIC

Gene VPS41, Length 3,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-203ENST00000395969 AGTR2P50052 363 aa5.11□□□□□ -1.59
VPS41-203ENST00000395969 HSD17B7P56937 341 aa5.11□□□□□ -1.59
VPS41-203ENST00000395969 NTHL1P78549 312 aa5.11□□□□□ -1.59
VPS41-203ENST00000395969 TMEM35AQ53FP2 167 aa5.11□□□□□ -1.59
VPS41-203ENST00000395969 ESCO2Q56NI9 601 aa5.11□□□□□ -1.59
VPS41-203ENST00000395969 FAM205BPQ63HN1 556 aa5.11□□□□□ -1.59
VPS41-203ENST00000395969 FRG2Q64ET8 278 aa5.11□□□□□ -1.59
VPS41-203ENST00000395969 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP5.11□□□□□ -1.59
VPS41-203ENST00000395969 UBE2R2Q712K3 238 aaPredicted RBP5.11□□□□□ -1.59
VPS41-203ENST00000395969 MILR1Q7Z6M3 343 aa5.11□□□□□ -1.59
VPS41-203ENST00000395969 ABI3BPQ7Z7G0 1075 aa5.11□□□□□ -1.59
VPS41-203ENST00000395969 B3GNT8Q7Z7M8 397 aa5.11□□□□□ -1.59
VPS41-203ENST00000395969 HORMAD1Q86X24 394 aa5.11□□□□□ -1.59
VPS41-203ENST00000395969 MSRB3Q8IXL7 192 aa5.11□□□□□ -1.59
VPS41-203ENST00000395969 FLVCR1-AS1Q8TAF5 88 aa5.11□□□□□ -1.59
VPS41-203ENST00000395969 PCNPQ8WW12 178 aaKnown RBP5.11□□□□□ -1.59
VPS41-203ENST00000395969 FRG2BQ96QU4 278 aa5.11□□□□□ -1.59
VPS41-203ENST00000395969 CCDC32Q9BV29 185 aa5.11□□□□□ -1.59
VPS41-203ENST00000395969 CDADC1Q9BWV3 514 aa5.11□□□□□ -1.59
VPS41-203ENST00000395969 APOL5Q9BWW9 433 aa5.11□□□□□ -1.59
VPS41-203ENST00000395969 TM6SF2Q9BZW4 377 aa5.11□□□□□ -1.59
VPS41-203ENST00000395969 SMURF2Q9HAU4 748 aa5.11□□□□□ -1.59
VPS41-203ENST00000395969 ZBTB20Q9HC78 741 aaPredicted RBP5.11□□□□□ -1.59
VPS41-203ENST00000395969 BRD7Q9NPI1 651 aa5.11□□□□□ -1.59
VPS41-203ENST00000395969 TAS2R9Q9NYW1 312 aa5.11□□□□□ -1.59
VPS41-203ENST00000395969 CD274Q9NZQ7 290 aa5.11□□□□□ -1.59
VPS41-203ENST00000395969 PCDHGA2Q9Y5H1 932 aa5.11□□□□□ -1.59
VPS41-203ENST00000395969 COL27A1Q8IZC6 1860 aaPredicted RBP5.11□□□□□ -1.59
VPS41-203ENST00000395969 ATP6AP2A0A1C7CYW4 349 aa5.11□□□□□ -1.59
VPS41-203ENST00000395969 BLACEA4D250 179 aa5.11□□□□□ -1.59
VPS41-203ENST00000395969 C12orf71A8MTZ7 269 aa5.11□□□□□ -1.59
VPS41-203ENST00000395969 CCL22O00626 93 aa5.11□□□□□ -1.59
VPS41-203ENST00000395969 BET1O15155 118 aa5.11□□□□□ -1.59
VPS41-203ENST00000395969 PI15O43692 258 aa5.11□□□□□ -1.59
VPS41-203ENST00000395969 TSC22D2O75157 780 aa5.11□□□□□ -1.59
VPS41-203ENST00000395969 FBXO24O75426 580 aa5.11□□□□□ -1.59
VPS41-203ENST00000395969 ATP6AP2O75787 350 aa5.11□□□□□ -1.59
VPS41-203ENST00000395969 UGT2B17O75795 530 aa5.11□□□□□ -1.59
VPS41-203ENST00000395969 RECQL5O94762 991 aaPredicted RBP5.11□□□□□ -1.59
VPS41-203ENST00000395969 NPPBP16860 134 aa5.11□□□□□ -1.59
VPS41-203ENST00000395969 CD22P20273 847 aa5.11□□□□□ -1.59
VPS41-203ENST00000395969 NTSR1P30989 418 aa5.11□□□□□ -1.59
VPS41-203ENST00000395969 RPS5P46782 204 aaKnown RBP5.11□□□□□ -1.59
VPS41-203ENST00000395969 UGT2B15P54855 530 aa5.11□□□□□ -1.59
VPS41-203ENST00000395969 EEF1A2Q05639 463 aaKnown RBP5.11□□□□□ -1.59
VPS41-203ENST00000395969 RBBP4Q09028 425 aa5.11□□□□□ -1.59
VPS41-203ENST00000395969 GALEQ14376 348 aa5.11□□□□□ -1.59
VPS41-203ENST00000395969 ABRAXAS2Q15018 415 aa5.11□□□□□ -1.59
VPS41-203ENST00000395969 KIF19Q2TAC6 998 aa5.11□□□□□ -1.59
VPS41-203ENST00000395969 TM4SF20Q53R12 229 aa5.11□□□□□ -1.59
VPS41-203ENST00000395969 FAM219BQ5XKK7 198 aa5.11□□□□□ -1.59
VPS41-203ENST00000395969 CLEC6AQ6EIG7 209 aa5.11□□□□□ -1.59
VPS41-203ENST00000395969 LAIR1Q6GTX8 287 aa5.11□□□□□ -1.59
VPS41-203ENST00000395969 RPS27LQ71UM5 84 aaKnown RBP5.11□□□□□ -1.59
VPS41-203ENST00000395969 KCTD20Q7Z5Y7 419 aa5.11□□□□□ -1.59
VPS41-203ENST00000395969 CCDC190Q86UF4 302 aa5.11□□□□□ -1.59
VPS41-203ENST00000395969 VRK3Q8IV63 474 aa5.11□□□□□ -1.59
VPS41-203ENST00000395969 SPATA6LQ8N4H0 392 aa5.11□□□□□ -1.59
VPS41-203ENST00000395969 ARHGEF39Q8N4T4 335 aa5.11□□□□□ -1.59
VPS41-203ENST00000395969 TMEM145Q8NBT3 493 aa5.11□□□□□ -1.59
VPS41-203ENST00000395969 ZNF548Q8NEK5 533 aaPredicted RBP5.11□□□□□ -1.59
VPS41-203ENST00000395969 OR52B6Q8NGF0 335 aa5.11□□□□□ -1.59
VPS41-203ENST00000395969 CNIH3Q8TBE1 160 aa5.11□□□□□ -1.59
VPS41-203ENST00000395969 ZFAND1Q8TCF1 268 aa5.11□□□□□ -1.59
VPS41-203ENST00000395969 AP2M1Q96CW1 435 aa5.11□□□□□ -1.59
VPS41-203ENST00000395969 TM4SF19Q96DZ7 209 aa5.11□□□□□ -1.59
VPS41-203ENST00000395969 SMIM14Q96QK8 99 aa5.11□□□□□ -1.59
VPS41-203ENST00000395969 OR2A14Q96R47 310 aa5.11□□□□□ -1.59
VPS41-203ENST00000395969 PKP4Q99569 1192 aa5.11□□□□□ -1.59
VPS41-203ENST00000395969 TRMT61BQ9BVS5 477 aaKnown RBP5.11□□□□□ -1.59
VPS41-203ENST00000395969 SMG9Q9H0W8 520 aaKnown RBP5.11□□□□□ -1.59
VPS41-203ENST00000395969 LRTM1Q9HBL6 345 aa5.11□□□□□ -1.59
VPS41-203ENST00000395969 PRDM8Q9NQV8 689 aa5.11□□□□□ -1.59
VPS41-203ENST00000395969 TOR4AQ9NXH8 423 aa5.11□□□□□ -1.59
VPS41-203ENST00000395969 DNAJB9Q9UBS3 223 aa5.11□□□□□ -1.59
VPS41-203ENST00000395969 TMEFF2Q9UIK5 374 aaPredicted RBP5.11□□□□□ -1.59
VPS41-203ENST00000395969 CDV3Q9UKY7 258 aaKnown RBP5.11□□□□□ -1.59
VPS41-203ENST00000395969 LHX6Q9UPM6 363 aa5.11□□□□□ -1.59
VPS41-203ENST00000395969 ZFR2Q9UPR6 939 aaKnown RBP5.11□□□□□ -1.59
VPS41-203ENST00000395969 AUP1Q9Y679 476 aa5.11□□□□□ -1.59
VPS41-203ENST00000395969 HSPE1-MOB4S4R3N1 261 aa5.11□□□□□ -1.59
VPS41-203ENST00000395969 MYOFQ9NZM1 2061 aa5.11□□□□□ -1.59
VPS41-203ENST00000395969 A0A0U1RQS6 177 aa5.1□□□□□ -1.59
VPS41-203ENST00000395969 LEUTXA8MZ59 168 aa5.1□□□□□ -1.59
VPS41-203ENST00000395969 NOBOXO60393 691 aa5.1□□□□□ -1.59
VPS41-203ENST00000395969 ULK1O75385 1050 aa5.1□□□□□ -1.59
VPS41-203ENST00000395969 CLEC3AO75596 197 aa5.1□□□□□ -1.59
VPS41-203ENST00000395969 OR4F21O95013 312 aa5.1□□□□□ -1.59
VPS41-203ENST00000395969 EPN2O95208 641 aa5.1□□□□□ -1.59
VPS41-203ENST00000395969 CCNDBP1O95273 360 aa5.1□□□□□ -1.59
VPS41-203ENST00000395969 ANGPTL1O95841 491 aa5.1□□□□□ -1.59
VPS41-203ENST00000395969 PIRTP0C851 137 aa5.1□□□□□ -1.59
VPS41-203ENST00000395969 SMIM10L1P0DMW3 83 aa5.1□□□□□ -1.59
VPS41-203ENST00000395969 C1GALT1C1LP0DN25 315 aa5.1□□□□□ -1.59
VPS41-203ENST00000395969 IL7P13232 177 aa5.1□□□□□ -1.59
VPS41-203ENST00000395969 CD36P16671 472 aa5.1□□□□□ -1.59
VPS41-203ENST00000395969 GJA1P17302 382 aa5.1□□□□□ -1.59
VPS41-203ENST00000395969 IL32P24001 234 aa5.1□□□□□ -1.59
VPS41-203ENST00000395969 PRDX3P30048 256 aaKnown RBP5.1□□□□□ -1.59
VPS41-203ENST00000395969 RFX2P48378 723 aa5.1□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms