RNA–Protein interactions for RNA: ENST00000395896.8

VPS13C-203, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13C, Length 14,579 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-203ENST00000395896 ZNF334Q9HCZ1 680 aaPredicted RBP3.23□□□□□ -1.89
VPS13C-203ENST00000395896 PRSS16Q9NQE7 514 aa3.23□□□□□ -1.89
VPS13C-203ENST00000395896 CKLFQ9UBR5 152 aa3.23□□□□□ -1.89
VPS13C-203ENST00000395896 ICKQ9UPZ9 632 aa3.23□□□□□ -1.89
VPS13C-203ENST00000395896 MED31Q9Y3C7 131 aa3.23□□□□□ -1.89
VPS13C-203ENST00000395896 PCDHB14Q9Y5E9 798 aa3.23□□□□□ -1.89
VPS13C-203ENST00000395896 SLC22A7Q9Y694 548 aa3.23□□□□□ -1.89
VPS13C-203ENST00000395896 PRSS38A1L453 326 aa3.23□□□□□ -1.89
VPS13C-203ENST00000395896 H3BUI4 141 aa3.23□□□□□ -1.89
VPS13C-203ENST00000395896 SCAMP2O15127 329 aaKnown RBP3.23□□□□□ -1.89
VPS13C-203ENST00000395896 PRKD3O94806 890 aa3.23□□□□□ -1.89
VPS13C-203ENST00000395896 PDYNP01213 254 aa3.23□□□□□ -1.89
VPS13C-203ENST00000395896 DBIP07108 87 aaKnown RBP3.23□□□□□ -1.89
VPS13C-203ENST00000395896 UBL4AP11441 157 aa3.23□□□□□ -1.89
VPS13C-203ENST00000395896 ZNF3P17036 446 aa3.23□□□□□ -1.89
VPS13C-203ENST00000395896 IL12AP29459 219 aa3.23□□□□□ -1.89
VPS13C-203ENST00000395896 TYW3Q6IPR3 259 aaKnown RBP3.23□□□□□ -1.89
VPS13C-203ENST00000395896 BORAQ6PGQ7 559 aa3.23□□□□□ -1.89
VPS13C-203ENST00000395896 GID4Q8IVV7 300 aa3.23□□□□□ -1.89
VPS13C-203ENST00000395896 PPP1R14BQ96C90 147 aa3.23□□□□□ -1.89
VPS13C-203ENST00000395896 SERINC2Q96SA4 455 aa3.23□□□□□ -1.89
VPS13C-203ENST00000395896 AGPAT4Q9NRZ5 378 aa3.23□□□□□ -1.89
VPS13C-203ENST00000395896 WNT16Q9UBV4 365 aa3.23□□□□□ -1.89
VPS13C-203ENST00000395896 SYT5O00445 386 aa3.23□□□□□ -1.89
VPS13C-203ENST00000395896 LAMTOR5O43504 91 aa3.23□□□□□ -1.89
VPS13C-203ENST00000395896 CER1O95813 267 aa3.23□□□□□ -1.89
VPS13C-203ENST00000395896 SERPINA3P01011 423 aa3.23□□□□□ -1.89
VPS13C-203ENST00000395896 SDC1P18827 310 aa3.23□□□□□ -1.89
VPS13C-203ENST00000395896 GPX3P22352 226 aa3.23□□□□□ -1.89
VPS13C-203ENST00000395896 WASP42768 502 aa3.23□□□□□ -1.89
VPS13C-203ENST00000395896 RGRP47804 291 aa3.23□□□□□ -1.89
VPS13C-203ENST00000395896 HSD17B7P56937 341 aa3.23□□□□□ -1.89
VPS13C-203ENST00000395896 TAS2R43P59537 309 aa3.23□□□□□ -1.89
VPS13C-203ENST00000395896 SIM2Q14190 667 aaPredicted RBP3.23□□□□□ -1.89
VPS13C-203ENST00000395896 ANKDD1AQ495B1 522 aa3.23□□□□□ -1.89
VPS13C-203ENST00000395896 TMEM196Q5HYL7 178 aa3.23□□□□□ -1.89
VPS13C-203ENST00000395896 ACOT4Q8N9L9 421 aa3.23□□□□□ -1.89
VPS13C-203ENST00000395896 FRS2Q8WU20 508 aa3.23□□□□□ -1.89
VPS13C-203ENST00000395896 BCL7CQ8WUZ0 217 aaPredicted RBP3.23□□□□□ -1.89
VPS13C-203ENST00000395896 TCEAL4Q96EI5 215 aa3.23□□□□□ -1.89
VPS13C-203ENST00000395896 PBX4Q9BYU1 374 aa3.23□□□□□ -1.89
VPS13C-203ENST00000395896 PCDHAC1Q9H158 963 aa3.23□□□□□ -1.89
VPS13C-203ENST00000395896 SIAEQ9HAT2 523 aa3.23□□□□□ -1.89
VPS13C-203ENST00000395896 MMP17Q9ULZ9 603 aa3.23□□□□□ -1.89
VPS13C-203ENST00000395896 ZBTB32Q9Y2Y4 487 aaPredicted RBP3.23□□□□□ -1.89
VPS13C-203ENST00000395896 TECTAO75443 2155 aa3.23□□□□□ -1.89
VPS13C-203ENST00000395896 OR2T1O43869 369 aa3.23□□□□□ -1.89
VPS13C-203ENST00000395896 DPM1O60762 260 aa3.23□□□□□ -1.89
VPS13C-203ENST00000395896 T-ENOLP0DO92 83 aa3.23□□□□□ -1.89
VPS13C-203ENST00000395896 FOSL2P15408 326 aa3.23□□□□□ -1.89
VPS13C-203ENST00000395896 CCR4P51679 360 aa3.23□□□□□ -1.89
VPS13C-203ENST00000395896 PCDH1Q08174 1060 aa3.23□□□□□ -1.89
VPS13C-203ENST00000395896 SLAMF1Q13291 335 aa3.23□□□□□ -1.89
VPS13C-203ENST00000395896 ENPP2Q13822 863 aa3.23□□□□□ -1.89
VPS13C-203ENST00000395896 EGFLAMQ63HQ2 1017 aa3.23□□□□□ -1.89
VPS13C-203ENST00000395896 TANGO2Q6ICL3 276 aa3.23□□□□□ -1.89
VPS13C-203ENST00000395896 TECPR1Q7Z6L1 1165 aa3.23□□□□□ -1.89
VPS13C-203ENST00000395896 TMEM150AQ86TG1 271 aa3.23□□□□□ -1.89
VPS13C-203ENST00000395896 FAM124AQ86V42 546 aa3.23□□□□□ -1.89
VPS13C-203ENST00000395896 ZNF563Q8TA94 476 aa3.23□□□□□ -1.89
VPS13C-203ENST00000395896 FNDC8Q8TC99 324 aa3.23□□□□□ -1.89
VPS13C-203ENST00000395896 ZNF597Q96LX8 424 aa3.23□□□□□ -1.89
VPS13C-203ENST00000395896 IP6K3Q96PC2 410 aa3.23□□□□□ -1.89
VPS13C-203ENST00000395896 ACTRT3Q9BYD9 372 aa3.23□□□□□ -1.89
VPS13C-203ENST00000395896 ADAP2Q9NPF8 381 aa3.23□□□□□ -1.89
VPS13C-203ENST00000395896 BAIAP2Q9UQB8 552 aa3.23□□□□□ -1.89
VPS13C-203ENST00000395896 LOC100130705A0A1B0GUX0 176 aa3.23□□□□□ -1.89
VPS13C-203ENST00000395896 WWP2O00308 870 aa3.23□□□□□ -1.89
VPS13C-203ENST00000395896 TP53I11O14683 189 aa3.23□□□□□ -1.89
VPS13C-203ENST00000395896 SERPINA1P01009 418 aa3.23□□□□□ -1.89
VPS13C-203ENST00000395896 IGHEP01854 428 aa3.23□□□□□ -1.89
VPS13C-203ENST00000395896 TSPAN19P0C672 248 aa3.23□□□□□ -1.89
VPS13C-203ENST00000395896 JUNDP17535 347 aa3.23□□□□□ -1.89
VPS13C-203ENST00000395896 RPS7P62081 194 aaKnown RBP3.23□□□□□ -1.89
VPS13C-203ENST00000395896 RALGDSQ12967 914 aa3.23□□□□□ -1.89
VPS13C-203ENST00000395896 PPP1R3AQ16821 1122 aa3.23□□□□□ -1.89
VPS13C-203ENST00000395896 PTCHD4Q6ZW05 846 aa3.23□□□□□ -1.89
VPS13C-203ENST00000395896 PLEKHM3Q6ZWE6 761 aa3.23□□□□□ -1.89
VPS13C-203ENST00000395896 CLHC1Q8NHS4 586 aa3.23□□□□□ -1.89
VPS13C-203ENST00000395896 SFXN5Q8TD22 340 aa3.23□□□□□ -1.89
VPS13C-203ENST00000395896 RNFT2Q96EX2 444 aa3.23□□□□□ -1.89
VPS13C-203ENST00000395896 CRELD1Q96HD1 420 aa3.23□□□□□ -1.89
VPS13C-203ENST00000395896 STRADBQ9C0K7 418 aa3.23□□□□□ -1.89
VPS13C-203ENST00000395896 CXorf21Q9HAI6 301 aa3.23□□□□□ -1.89
VPS13C-203ENST00000395896 SERINC1Q9NRX5 453 aa3.23□□□□□ -1.89
VPS13C-203ENST00000395896 FBXW2Q9UKT8 454 aa3.23□□□□□ -1.89
VPS13C-203ENST00000395896 NEU3Q9UQ49 428 aa3.23□□□□□ -1.89
VPS13C-203ENST00000395896 SLC30A4O14863 429 aa3.23□□□□□ -1.89
VPS13C-203ENST00000395896 REM1O75628 298 aa3.23□□□□□ -1.89
VPS13C-203ENST00000395896 KLF8O95600 359 aaPredicted RBP3.23□□□□□ -1.89
VPS13C-203ENST00000395896 PRG2P13727 222 aa3.23□□□□□ -1.89
VPS13C-203ENST00000395896 XKP51811 444 aa3.23□□□□□ -1.89
VPS13C-203ENST00000395896 SRP54P61011 504 aaKnown RBP3.23□□□□□ -1.89
VPS13C-203ENST00000395896 CTSL3PQ5NE16 218 aa3.23□□□□□ -1.89
VPS13C-203ENST00000395896 OGFRL1Q5TC84 451 aaPredicted RBP3.23□□□□□ -1.89
VPS13C-203ENST00000395896 SYVN1Q86TM6 617 aa3.23□□□□□ -1.89
VPS13C-203ENST00000395896 SMRP1Q8NCR6 262 aa3.23□□□□□ -1.89
VPS13C-203ENST00000395896 ESAMQ96AP7 390 aa3.23□□□□□ -1.89
VPS13C-203ENST00000395896 MKKSQ9NPJ1 570 aaPredicted RBP3.23□□□□□ -1.89
VPS13C-203ENST00000395896 RPRD1BQ9NQG5 326 aaKnown RBP3.23□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms