RNA–Protein interactions for RNA: ENST00000395823.2

HMGB1P10-201, Transcript of high mobility group box 1 pseudogene 10, humanhuman

BASIC

Gene HMGB1P10, Length 563 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P10-201ENST00000395823 PDZK1IP1Q13113 114 aa4.31□□□□□ -1.72
HMGB1P10-201ENST00000395823 DCAF12Q5T6F0 453 aa4.31□□□□□ -1.72
HMGB1P10-201ENST00000395823 IL23RQ5VWK5 629 aa4.31□□□□□ -1.72
HMGB1P10-201ENST00000395823 HIST2H2AA3Q6FI13 130 aa4.31□□□□□ -1.72
HMGB1P10-201ENST00000395823 SLC25A24Q6NUK1 477 aa4.31□□□□□ -1.72
HMGB1P10-201ENST00000395823 CDC42EP5Q6NZY7 148 aa4.31□□□□□ -1.72
HMGB1P10-201ENST00000395823 HOGA1Q86XE5 327 aa4.31□□□□□ -1.72
HMGB1P10-201ENST00000395823 BCORP1Q8N888 145 aa4.31□□□□□ -1.72
HMGB1P10-201ENST00000395823 RELL2Q8NC24 303 aaPredicted RBP4.31□□□□□ -1.72
HMGB1P10-201ENST00000395823 OR4D10Q8NGI6 311 aa4.31□□□□□ -1.72
HMGB1P10-201ENST00000395823 ATP8B4Q8TF62 1192 aa4.31□□□□□ -1.72
HMGB1P10-201ENST00000395823 TMEM190Q8WZ59 177 aa4.31□□□□□ -1.72
HMGB1P10-201ENST00000395823 PHYHIPQ92561 330 aa4.31□□□□□ -1.72
HMGB1P10-201ENST00000395823 ZNF501Q96CX3 271 aaPredicted RBP4.31□□□□□ -1.72
HMGB1P10-201ENST00000395823 UHRF2Q96PU4 802 aa4.31□□□□□ -1.72
HMGB1P10-201ENST00000395823 CTAGE1Q96RT6 745 aa4.31□□□□□ -1.72
HMGB1P10-201ENST00000395823 RAB40CQ96S21 281 aa4.31□□□□□ -1.72
HMGB1P10-201ENST00000395823 NODALQ96S42 347 aa4.31□□□□□ -1.72
HMGB1P10-201ENST00000395823 MED17Q9NVC6 651 aa4.31□□□□□ -1.72
HMGB1P10-201ENST00000395823 C2orf42Q9NWW7 574 aa4.31□□□□□ -1.72
HMGB1P10-201ENST00000395823 PYGO1Q9Y3Y4 419 aa4.31□□□□□ -1.72
HMGB1P10-201ENST00000395823 KIF7Q2M1P5 1343 aa4.3□□□□□ -1.72
HMGB1P10-201ENST00000395823 A0A087WZY1 265 aa4.3□□□□□ -1.72
HMGB1P10-201ENST00000395823 PES1O00541 588 aaKnown RBP4.3□□□□□ -1.72
HMGB1P10-201ENST00000395823 CCSO14618 274 aa4.3□□□□□ -1.72
HMGB1P10-201ENST00000395823 CSO75390 466 aaKnown RBP4.3□□□□□ -1.72
HMGB1P10-201ENST00000395823 SCGB2A1O75556 95 aa4.3□□□□□ -1.72
HMGB1P10-201ENST00000395823 KRT6BP04259 564 aa4.3□□□□□ -1.72
HMGB1P10-201ENST00000395823 HMBSP08397 361 aa4.3□□□□□ -1.72
HMGB1P10-201ENST00000395823 HLA-FP30511 346 aa4.3□□□□□ -1.72
HMGB1P10-201ENST00000395823 OPRL1P41146 370 aa4.3□□□□□ -1.72
HMGB1P10-201ENST00000395823 KRT6CP48668 564 aa4.3□□□□□ -1.72
HMGB1P10-201ENST00000395823 TRPC1P48995 793 aa4.3□□□□□ -1.72
HMGB1P10-201ENST00000395823 SH3BGRP55822 239 aaPredicted RBP4.3□□□□□ -1.72
HMGB1P10-201ENST00000395823 DRP2Q13474 957 aa4.3□□□□□ -1.72
HMGB1P10-201ENST00000395823 SNX1Q13596 522 aa4.3□□□□□ -1.72
HMGB1P10-201ENST00000395823 RFTN1Q14699 578 aaPredicted RBP4.3□□□□□ -1.72
HMGB1P10-201ENST00000395823 ZKSCAN8Q15776 578 aaPredicted RBP4.3□□□□□ -1.72
HMGB1P10-201ENST00000395823 ZSWIM7Q19AV6 140 aa4.3□□□□□ -1.72
HMGB1P10-201ENST00000395823 RIPPLY2Q5TAB7 128 aa4.3□□□□□ -1.72
HMGB1P10-201ENST00000395823 ARHGAP17Q68EM7 881 aa4.3□□□□□ -1.72
HMGB1P10-201ENST00000395823 RTL6Q6ICC9 239 aa4.3□□□□□ -1.72
HMGB1P10-201ENST00000395823 NEPROQ6NW34 567 aa4.3□□□□□ -1.72
HMGB1P10-201ENST00000395823 Q6ZSR9 355 aa4.3□□□□□ -1.72
HMGB1P10-201ENST00000395823 Q71RC1 249 aaPredicted RBP4.3□□□□□ -1.72
HMGB1P10-201ENST00000395823 ARMCX2Q7L311 632 aa4.3□□□□□ -1.72
HMGB1P10-201ENST00000395823 MCM10Q7L590 875 aa4.3□□□□□ -1.72
HMGB1P10-201ENST00000395823 OTUD6AQ7L8S5 288 aa4.3□□□□□ -1.72
HMGB1P10-201ENST00000395823 OR4N5Q8IXE1 308 aa4.3□□□□□ -1.72
HMGB1P10-201ENST00000395823 LSMEM2Q8N112 164 aa4.3□□□□□ -1.72
HMGB1P10-201ENST00000395823 CERS5Q8N5B7 392 aa4.3□□□□□ -1.72
HMGB1P10-201ENST00000395823 OR5M9Q8NGP3 310 aa4.3□□□□□ -1.72
HMGB1P10-201ENST00000395823 RPLP0P6Q8NHW5 317 aa4.3□□□□□ -1.72
HMGB1P10-201ENST00000395823 LIPHQ8WWY8 451 aa4.3□□□□□ -1.72
HMGB1P10-201ENST00000395823 MRPL24Q96A35 216 aaKnown RBP4.3□□□□□ -1.72
HMGB1P10-201ENST00000395823 COG3Q96JB2 828 aa4.3□□□□□ -1.72
HMGB1P10-201ENST00000395823 PGLYRP2Q96PD5 576 aa4.3□□□□□ -1.72
HMGB1P10-201ENST00000395823 DEFB118Q96PH6 123 aa4.3□□□□□ -1.72
HMGB1P10-201ENST00000395823 THUMPD2Q9BTF0 503 aaKnown RBP4.3□□□□□ -1.72
HMGB1P10-201ENST00000395823 YAE1D1Q9NRH1 226 aa4.3□□□□□ -1.72
HMGB1P10-201ENST00000395823 VPS54Q9P1Q0 977 aa4.3□□□□□ -1.72
HMGB1P10-201ENST00000395823 ATXN10Q9UBB4 475 aa4.3□□□□□ -1.72
HMGB1P10-201ENST00000395823 LHX3Q9UBR4 397 aa4.3□□□□□ -1.72
HMGB1P10-201ENST00000395823 TBK1Q9UHD2 729 aa4.3□□□□□ -1.72
HMGB1P10-201ENST00000395823 SMC3Q9UQE7 1217 aa4.3□□□□□ -1.72
HMGB1P10-201ENST00000395823 RNF115Q9Y4L5 304 aa4.3□□□□□ -1.72
HMGB1P10-201ENST00000395823 RAD54L2Q9Y4B4 1467 aa4.3□□□□□ -1.72
HMGB1P10-201ENST00000395823 WDR81Q562E7 1941 aa4.29□□□□□ -1.72
HMGB1P10-201ENST00000395823 ABCC4O15439 1325 aa4.29□□□□□ -1.72
HMGB1P10-201ENST00000395823 RNF123Q5XPI4 1314 aa4.29□□□□□ -1.72
HMGB1P10-201ENST00000395823 G3V2L1 256 aa4.29□□□□□ -1.72
HMGB1P10-201ENST00000395823 CEACAM4O75871 244 aa4.29□□□□□ -1.72
HMGB1P10-201ENST00000395823 CLDN1O95832 211 aa4.29□□□□□ -1.72
HMGB1P10-201ENST00000395823 LYNP07948 512 aa4.29□□□□□ -1.72
HMGB1P10-201ENST00000395823 HIST1H2AGP0C0S8 130 aaPredicted RBP4.29□□□□□ -1.72
HMGB1P10-201ENST00000395823 HSPA5P11021 654 aaKnown RBP4.29□□□□□ -1.72
HMGB1P10-201ENST00000395823 CEBPBP17676 345 aa4.29□□□□□ -1.72
HMGB1P10-201ENST00000395823 CYP2F1P24903 491 aa4.29□□□□□ -1.72
HMGB1P10-201ENST00000395823 GIFP27352 417 aa4.29□□□□□ -1.72
HMGB1P10-201ENST00000395823 ALDH3B1P43353 468 aa4.29□□□□□ -1.72
HMGB1P10-201ENST00000395823 MTIF2P46199 727 aaKnown RBP4.29□□□□□ -1.72
HMGB1P10-201ENST00000395823 NPY2RP49146 381 aa4.29□□□□□ -1.72
HMGB1P10-201ENST00000395823 MTTPP55157 894 aa4.29□□□□□ -1.72
HMGB1P10-201ENST00000395823 RPL27P61353 136 aaKnown RBP4.29□□□□□ -1.72
HMGB1P10-201ENST00000395823 GNB1P62873 340 aa4.29□□□□□ -1.72
HMGB1P10-201ENST00000395823 RIGQ13278 110 aa4.29□□□□□ -1.72
HMGB1P10-201ENST00000395823 ITPK1Q13572 414 aa4.29□□□□□ -1.72
HMGB1P10-201ENST00000395823 CLPPQ16740 277 aaPredicted RBP4.29□□□□□ -1.72
HMGB1P10-201ENST00000395823 ADPRMQ3LIE5 342 aa4.29□□□□□ -1.72
HMGB1P10-201ENST00000395823 AFTPHQ6ULP2 937 aa4.29□□□□□ -1.72
HMGB1P10-201ENST00000395823 ARSKQ6UWY0 536 aa4.29□□□□□ -1.72
HMGB1P10-201ENST00000395823 Q6ZRG5 221 aa4.29□□□□□ -1.72
HMGB1P10-201ENST00000395823 HIST2H2ABQ8IUE6 130 aaPredicted RBP4.29□□□□□ -1.72
HMGB1P10-201ENST00000395823 DCUN1D3Q8IWE4 304 aa4.29□□□□□ -1.72
HMGB1P10-201ENST00000395823 RAB42Q8N4Z0 105 aa4.29□□□□□ -1.72
HMGB1P10-201ENST00000395823 COLGALT1Q8NBJ5 622 aa4.29□□□□□ -1.72
HMGB1P10-201ENST00000395823 OR9Q2Q8NGE9 314 aa4.29□□□□□ -1.72
HMGB1P10-201ENST00000395823 OR5T2Q8NGG2 359 aa4.29□□□□□ -1.72
HMGB1P10-201ENST00000395823 MAPK15Q8TD08 544 aa4.29□□□□□ -1.72
HMGB1P10-201ENST00000395823 U2AF1L4Q8WU68 220 aaKnown RBP4.29□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms