RNA–Protein interactions for RNA: ENST00000395131.5

PFDN6-204, Transcript of prefoldin subunit 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PFDN6, Length 884 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN6-204ENST00000395131 H7C0C1 242 aa12.59□□□□□ -0.39
PFDN6-204ENST00000395131 APOC4-APOC2K7ER74 178 aa12.59□□□□□ -0.39
PFDN6-204ENST00000395131 OVOL3O00110 214 aa12.59□□□□□ -0.39
PFDN6-204ENST00000395131 APOC2P02655 101 aa12.59□□□□□ -0.39
PFDN6-204ENST00000395131 RPS3P23396 243 aaKnown RBP eCLIP12.59□□□□□ -0.396e-7■■■□□ 19.1
PFDN6-204ENST00000395131 LSP1P33241 339 aa12.59□□□□□ -0.39
PFDN6-204ENST00000395131 ATP5OP48047 213 aa12.59□□□□□ -0.39
PFDN6-204ENST00000395131 TRPC1P48995 793 aa12.59□□□□□ -0.39
PFDN6-204ENST00000395131 PLTPP55058 493 aa12.59□□□□□ -0.39
PFDN6-204ENST00000395131 AARS2Q5JTZ9 985 aaKnown RBP12.59□□□□□ -0.39
PFDN6-204ENST00000395131 SLC22A10Q63ZE4 541 aa12.59□□□□□ -0.39
PFDN6-204ENST00000395131 HSDL2Q6YN16 418 aa12.59□□□□□ -0.39
PFDN6-204ENST00000395131 BTLAQ7Z6A9 289 aa12.59□□□□□ -0.39
PFDN6-204ENST00000395131 LRRC6Q86X45 466 aa12.59□□□□□ -0.39
PFDN6-204ENST00000395131 MEX3DQ86XN8 651 aaKnown RBP12.59□□□□□ -0.39
PFDN6-204ENST00000395131 ZNF611Q8N823 705 aa12.59□□□□□ -0.39
PFDN6-204ENST00000395131 MFSD9Q8NBP5 474 aa12.59□□□□□ -0.39
PFDN6-204ENST00000395131 ZPLD1Q8TCW7 415 aa12.59□□□□□ -0.39
PFDN6-204ENST00000395131 PAQR8Q8TEZ7 354 aa12.59□□□□□ -0.39
PFDN6-204ENST00000395131 TRIM31Q9BZY9 425 aa12.59□□□□□ -0.39
PFDN6-204ENST00000395131 PROK2Q9HC23 129 aa12.59□□□□□ -0.39
PFDN6-204ENST00000395131 SNX24Q9Y343 169 aa12.59□□□□□ -0.39
PFDN6-204ENST00000395131 IKBKGQ9Y6K9 419 aa12.59□□□□□ -0.39
PFDN6-204ENST00000395131 FREM1Q5H8C1 2179 aa12.59□□□□□ -0.39
PFDN6-204ENST00000395131 CATP04040 527 aaKnown RBP12.58□□□□□ -0.4
PFDN6-204ENST00000395131 THBS1P07996 1170 aa12.58□□□□□ -0.4
PFDN6-204ENST00000395131 RNH1P13489 461 aaKnown RBP12.58□□□□□ -0.4
PFDN6-204ENST00000395131 TTPAP49638 278 aa12.58□□□□□ -0.4
PFDN6-204ENST00000395131 DIO3P55073 304 aa12.58□□□□□ -0.4
PFDN6-204ENST00000395131 COPS2P61201 443 aa12.58□□□□□ -0.4
PFDN6-204ENST00000395131 FAM27E3Q08E93 113 aa12.58□□□□□ -0.4
PFDN6-204ENST00000395131 PWP1Q13610 501 aa12.58□□□□□ -0.4
PFDN6-204ENST00000395131 LIPNQ5VXI9 398 aa12.58□□□□□ -0.4
PFDN6-204ENST00000395131 SH2D5Q6ZV89 423 aa12.58□□□□□ -0.4
PFDN6-204ENST00000395131 LDB1Q86U70 411 aaPredicted RBP12.58□□□□□ -0.4
PFDN6-204ENST00000395131 SCUBE1Q8IWY4 988 aa12.58□□□□□ -0.4
PFDN6-204ENST00000395131 KATNAL2Q8IYT4 538 aa12.58□□□□□ -0.4
PFDN6-204ENST00000395131 RCOR2Q8IZ40 523 aa12.58□□□□□ -0.4
PFDN6-204ENST00000395131 SGMS2Q8NHU3 365 aa12.58□□□□□ -0.4
PFDN6-204ENST00000395131 WDYHV1Q96HA8 205 aa12.58□□□□□ -0.4
PFDN6-204ENST00000395131 UCN2Q96RP3 112 aa12.58□□□□□ -0.4
PFDN6-204ENST00000395131 KCNK17Q96T54 332 aa12.58□□□□□ -0.4
PFDN6-204ENST00000395131 RASSF4Q9H2L5 321 aa12.58□□□□□ -0.4
PFDN6-204ENST00000395131 ESRP2Q9H6T0 727 aaKnown RBP12.58□□□□□ -0.4
PFDN6-204ENST00000395131 LRRC40Q9H9A6 602 aa12.58□□□□□ -0.4
PFDN6-204ENST00000395131 SLC2A6Q9UGQ3 507 aa12.58□□□□□ -0.4
PFDN6-204ENST00000395131 ZNF281Q9Y2X9 895 aa12.58□□□□□ -0.4
PFDN6-204ENST00000395131 A0A087WUV0 522 aaPredicted RBP12.57□□□□□ -0.4
PFDN6-204ENST00000395131 LRRC14BA6NHZ5 514 aa12.57□□□□□ -0.4
PFDN6-204ENST00000395131 GPRIN2O60269 458 aa12.57□□□□□ -0.4
PFDN6-204ENST00000395131 AVILO75366 819 aa12.57□□□□□ -0.4
PFDN6-204ENST00000395131 STK10O94804 968 aaKnown RBP12.57□□□□□ -0.4
PFDN6-204ENST00000395131 C1QAP02745 245 aa12.57□□□□□ -0.4
PFDN6-204ENST00000395131 SLCO1A2P46721 670 aa12.57□□□□□ -0.4
PFDN6-204ENST00000395131 CORO7P57737 925 aa12.57□□□□□ -0.4
PFDN6-204ENST00000395131 KCNJ2P63252 427 aa12.57□□□□□ -0.4
PFDN6-204ENST00000395131 OCRLQ01968 901 aa12.57□□□□□ -0.4
PFDN6-204ENST00000395131 GAB1Q13480 694 aa12.57□□□□□ -0.4
PFDN6-204ENST00000395131 CCNG2Q16589 344 aa12.57□□□□□ -0.4
PFDN6-204ENST00000395131 MPEG1Q2M385 716 aa12.57□□□□□ -0.4
PFDN6-204ENST00000395131 PARP6Q2NL67 630 aa12.57□□□□□ -0.4
PFDN6-204ENST00000395131 ZNF791Q3KP31 576 aaPredicted RBP12.57□□□□□ -0.4
PFDN6-204ENST00000395131 TSTD2Q5T7W7 516 aa12.57□□□□□ -0.4
PFDN6-204ENST00000395131 THEMIS2Q5TEJ8 643 aa12.57□□□□□ -0.4
PFDN6-204ENST00000395131 BBS12Q6ZW61 710 aa12.57□□□□□ -0.4
PFDN6-204ENST00000395131 ADGRE4PQ86SQ3 457 aa12.57□□□□□ -0.4
PFDN6-204ENST00000395131 CAND1Q86VP6 1230 aaKnown RBP12.57□□□□□ -0.4
PFDN6-204ENST00000395131 CCDC89Q8N998 374 aa12.57□□□□□ -0.4
PFDN6-204ENST00000395131 PEX13Q92968 403 aa12.57□□□□□ -0.4
PFDN6-204ENST00000395131 ZBTB9Q96C00 473 aa12.57□□□□□ -0.4
PFDN6-204ENST00000395131 TRMT61AQ96FX7 289 aaKnown RBP12.57□□□□□ -0.4
PFDN6-204ENST00000395131 SNF8Q96H20 258 aa12.57□□□□□ -0.4
PFDN6-204ENST00000395131 ART5Q96L15 291 aa12.57□□□□□ -0.4
PFDN6-204ENST00000395131 TM9SF2Q99805 663 aa12.57□□□□□ -0.4
PFDN6-204ENST00000395131 MED18Q9BUE0 208 aa12.57□□□□□ -0.4
PFDN6-204ENST00000395131 SHARPINQ9H0F6 387 aa12.57□□□□□ -0.4
PFDN6-204ENST00000395131 ADAP2Q9NPF8 381 aa12.57□□□□□ -0.4
PFDN6-204ENST00000395131 PNO1Q9NRX1 252 aaKnown RBP12.57□□□□□ -0.4
PFDN6-204ENST00000395131 PIH1D1Q9NWS0 290 aaKnown RBP12.57□□□□□ -0.4
PFDN6-204ENST00000395131 GRHL1Q9NZI5 618 aa12.57□□□□□ -0.4
PFDN6-204ENST00000395131 ANAPC5Q9UJX4 755 aa12.57□□□□□ -0.4
PFDN6-204ENST00000395131 PACSIN3Q9UKS6 424 aa12.57□□□□□ -0.4
PFDN6-204ENST00000395131 CAMK2AQ9UQM7 478 aa12.57□□□□□ -0.4
PFDN6-204ENST00000395131 TENM1Q9UKZ4 2725 aa12.57□□□□□ -0.4
PFDN6-204ENST00000395131 GMNCA6NCL1 334 aa12.56□□□□□ -0.4
PFDN6-204ENST00000395131 SYNDIG1LA6NDD5 238 aa12.56□□□□□ -0.4
PFDN6-204ENST00000395131 PSMD12O00232 456 aaPredicted RBP12.56□□□□□ -0.4
PFDN6-204ENST00000395131 MSTNO14793 375 aa12.56□□□□□ -0.4
PFDN6-204ENST00000395131 RGS16O15492 202 aaPredicted RBP12.56□□□□□ -0.4
PFDN6-204ENST00000395131 FAM107AO95990 144 aa12.56□□□□□ -0.4
PFDN6-204ENST00000395131 B3GALT4O96024 378 aa12.56□□□□□ -0.4
PFDN6-204ENST00000395131 HPNP05981 417 aa12.56□□□□□ -0.4
PFDN6-204ENST00000395131 IMPA1P29218 277 aa12.56□□□□□ -0.4
PFDN6-204ENST00000395131 PPP2R1BP30154 601 aa12.56□□□□□ -0.4
PFDN6-204ENST00000395131 HPDP32754 393 aaPredicted RBP12.56□□□□□ -0.4
PFDN6-204ENST00000395131 SKIV2L2P42285 1042 aaKnown RBP12.56□□□□□ -0.4
PFDN6-204ENST00000395131 RPL21P46778 160 aaKnown RBP12.56□□□□□ -0.4
PFDN6-204ENST00000395131 CCT5P48643 541 aa12.56□□□□□ -0.4
PFDN6-204ENST00000395131 MARCKSL1P49006 195 aa12.56□□□□□ -0.4
PFDN6-204ENST00000395131 MTTPP55157 894 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms