RNA–Protein interactions for RNA: ENST00000395060.5

CLIP2-203, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLIP2, Length 3,141 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-203ENST00000395060 A8MUA0 341 aa13.64□□□□□ -0.23
CLIP2-203ENST00000395060 C5orf58C9J3I9 102 aa13.64□□□□□ -0.23
CLIP2-203ENST00000395060 SYPP08247 313 aa13.64□□□□□ -0.23
CLIP2-203ENST00000395060 ZNF8P17098 575 aaPredicted RBP13.64□□□□□ -0.23
CLIP2-203ENST00000395060 POLR2EP19388 210 aaKnown RBP13.64□□□□□ -0.23
CLIP2-203ENST00000395060 MLLT1Q03111 559 aaPredicted RBP13.64□□□□□ -0.23
CLIP2-203ENST00000395060 PTSQ03393 145 aa13.64□□□□□ -0.23
CLIP2-203ENST00000395060 MAP4K2Q12851 820 aa13.64□□□□□ -0.23
CLIP2-203ENST00000395060 ZNF284Q2VY69 593 aa13.64□□□□□ -0.23
CLIP2-203ENST00000395060 SYTL3Q4VX76 610 aa13.64□□□□□ -0.23
CLIP2-203ENST00000395060 OR6C4Q8NGE1 309 aa13.64□□□□□ -0.23
CLIP2-203ENST00000395060 CREB3L4Q8TEY5 395 aa13.64□□□□□ -0.23
CLIP2-203ENST00000395060 GEMIN6Q8WXD5 167 aaKnown RBP13.64□□□□□ -0.23
CLIP2-203ENST00000395060 PPCDCQ96CD2 204 aa13.64□□□□□ -0.23
CLIP2-203ENST00000395060 ZBED6CLQ96FA7 236 aaPredicted RBP13.64□□□□□ -0.23
CLIP2-203ENST00000395060 LRR1Q96L50 414 aa13.64□□□□□ -0.23
CLIP2-203ENST00000395060 ABCG4Q9H172 646 aa13.64□□□□□ -0.23
CLIP2-203ENST00000395060 STMN3Q9NZ72 180 aa13.64□□□□□ -0.23
CLIP2-203ENST00000395060 SEC14L4Q9UDX3 406 aa13.64□□□□□ -0.23
CLIP2-203ENST00000395060 PLEKHB1Q9UF11 243 aaPredicted RBP13.64□□□□□ -0.23
CLIP2-203ENST00000395060 A0A0G2JN53 185 aa13.63□□□□□ -0.23
CLIP2-203ENST00000395060 NOS1APO75052 506 aaPredicted RBP13.63□□□□□ -0.23
CLIP2-203ENST00000395060 PDHA2P29803 388 aa13.63□□□□□ -0.23
CLIP2-203ENST00000395060 XCR1P46094 333 aa13.63□□□□□ -0.23
CLIP2-203ENST00000395060 HSPB3Q12988 150 aa13.63□□□□□ -0.23
CLIP2-203ENST00000395060 MPEG1Q2M385 716 aa13.63□□□□□ -0.23
CLIP2-203ENST00000395060 CEACAM20Q6UY09 585 aa13.63□□□□□ -0.23
CLIP2-203ENST00000395060 GPR155Q7Z3F1 870 aa13.63□□□□□ -0.23
CLIP2-203ENST00000395060 SETD6Q8TBK2 473 aa13.63□□□□□ -0.23
CLIP2-203ENST00000395060 CD99L2Q8TCZ2 262 aa13.63□□□□□ -0.23
CLIP2-203ENST00000395060 UPRTQ96BW1 309 aa13.63□□□□□ -0.23
CLIP2-203ENST00000395060 WRAP53Q9BUR4 548 aaKnown RBP13.63□□□□□ -0.23
CLIP2-203ENST00000395060 HDHD2Q9H0R4 259 aa13.63□□□□□ -0.23
CLIP2-203ENST00000395060 SMG9Q9H0W8 520 aaKnown RBP13.63□□□□□ -0.23
CLIP2-203ENST00000395060 NARFLQ9H6Q4 476 aa13.63□□□□□ -0.23
CLIP2-203ENST00000395060 MVB12BQ9H7P6 319 aa13.63□□□□□ -0.23
CLIP2-203ENST00000395060 BEX1Q9HBH7 125 aa13.63□□□□□ -0.23
CLIP2-203ENST00000395060 B3GAT2Q9NPZ5 323 aa13.63□□□□□ -0.23
CLIP2-203ENST00000395060 SEMA7AO75326 666 aa13.63□□□□□ -0.23
CLIP2-203ENST00000395060 NME6O75414 186 aaPredicted RBP13.63□□□□□ -0.23
CLIP2-203ENST00000395060 STATHP02808 62 aa13.63□□□□□ -0.23
CLIP2-203ENST00000395060 GSTM1P09488 218 aa13.63□□□□□ -0.23
CLIP2-203ENST00000395060 GJA1P17302 382 aa13.63□□□□□ -0.23
CLIP2-203ENST00000395060 CD70P32970 193 aa13.63□□□□□ -0.23
CLIP2-203ENST00000395060 MAP2K3P46734 347 aa13.63□□□□□ -0.23
CLIP2-203ENST00000395060 SP3Q02447 781 aa13.63□□□□□ -0.23
CLIP2-203ENST00000395060 LCN1P1Q5VSP4 162 aa13.63□□□□□ -0.23
CLIP2-203ENST00000395060 MLIPQ5VWP3 458 aa13.63□□□□□ -0.23
CLIP2-203ENST00000395060 CCDC149Q6ZUS6 474 aa13.63□□□□□ -0.23
CLIP2-203ENST00000395060 COMMD6Q7Z4G1 85 aa13.63□□□□□ -0.23
CLIP2-203ENST00000395060 CCDC28AQ8IWP9 274 aa13.63□□□□□ -0.23
CLIP2-203ENST00000395060 SLC30A8Q8IWU4 369 aa13.63□□□□□ -0.23
CLIP2-203ENST00000395060 LAS2Q8IYD9 372 aa13.63□□□□□ -0.23
CLIP2-203ENST00000395060 OR8H3Q8N146 312 aa13.63□□□□□ -0.23
CLIP2-203ENST00000395060 FBXO22Q8NEZ5 403 aa13.63□□□□□ -0.23
CLIP2-203ENST00000395060 WDR20Q8TBZ3 569 aa13.63□□□□□ -0.23
CLIP2-203ENST00000395060 REPS1Q96D71 796 aa13.63□□□□□ -0.23
CLIP2-203ENST00000395060 ZNF282Q9UDV7 671 aaPredicted RBP13.63□□□□□ -0.23
CLIP2-203ENST00000395060 PRELID1Q9Y255 219 aa13.63□□□□□ -0.23
CLIP2-203ENST00000395060 TRAPPC4Q9Y296 219 aa13.63□□□□□ -0.23
CLIP2-203ENST00000395060 ENPP4Q9Y6X5 453 aa13.63□□□□□ -0.23
CLIP2-203ENST00000395060 CASP8AP2Q9UKL3 1982 aa13.63□□□□□ -0.23
CLIP2-203ENST00000395060 TRAV6A0A075B6T7 132 aa13.62□□□□□ -0.23
CLIP2-203ENST00000395060 HEPACAM2A8MVW5 462 aa13.62□□□□□ -0.23
CLIP2-203ENST00000395060 M0R3H8 397 aa13.62□□□□□ -0.23
CLIP2-203ENST00000395060 HOXB6P17509 224 aaKnown RBP13.62□□□□□ -0.23
CLIP2-203ENST00000395060 HEPACAMQ14CZ8 416 aa13.62□□□□□ -0.23
CLIP2-203ENST00000395060 GLYR1Q49A26 553 aaPredicted RBP13.62□□□□□ -0.23
CLIP2-203ENST00000395060 Q6ZVL8 140 aa13.62□□□□□ -0.23
CLIP2-203ENST00000395060 C11orf96Q7Z7L8 435 aa13.62□□□□□ -0.23
CLIP2-203ENST00000395060 PGBD3Q8N328 593 aa13.62□□□□□ -0.23
CLIP2-203ENST00000395060 DNAJC5GQ8N7S2 189 aa13.62□□□□□ -0.23
CLIP2-203ENST00000395060 TET1Q8NFU7 2136 aa13.62□□□□□ -0.23
CLIP2-203ENST00000395060 RAET1EQ8TD07 263 aa13.62□□□□□ -0.23
CLIP2-203ENST00000395060 BCL7CQ8WUZ0 217 aaPredicted RBP13.62□□□□□ -0.23
CLIP2-203ENST00000395060 SLC9A6Q92581 669 aa13.62□□□□□ -0.23
CLIP2-203ENST00000395060 SLC25A46Q96AG3 418 aa13.62□□□□□ -0.23
CLIP2-203ENST00000395060 MND1Q9BWT6 205 aa13.62□□□□□ -0.23
CLIP2-203ENST00000395060 CIB4A0PJX0 185 aa13.62□□□□□ -0.23
CLIP2-203ENST00000395060 HYKKA2RU49 373 aa13.62□□□□□ -0.23
CLIP2-203ENST00000395060 SYNDIG1LA6NDD5 238 aa13.62□□□□□ -0.23
CLIP2-203ENST00000395060 ZDHHC11BP0C7U3 371 aa13.62□□□□□ -0.23
CLIP2-203ENST00000395060 PSMA3P25788 255 aa13.62□□□□□ -0.23
CLIP2-203ENST00000395060 MRPL28Q13084 256 aaKnown RBP13.62□□□□□ -0.23
CLIP2-203ENST00000395060 KIAA1841Q6NSI8 718 aa13.62□□□□□ -0.23
CLIP2-203ENST00000395060 UNC5DQ6UXZ4 953 aa13.62□□□□□ -0.23
CLIP2-203ENST00000395060 TM9SF4Q92544 642 aa13.62□□□□□ -0.23
CLIP2-203ENST00000395060 MRPS31Q92665 395 aaKnown RBP13.62□□□□□ -0.23
CLIP2-203ENST00000395060 MAPKAP1Q9BPZ7 522 aa13.62□□□□□ -0.23
CLIP2-203ENST00000395060 YIPF4Q9BSR8 244 aa13.62□□□□□ -0.23
CLIP2-203ENST00000395060 RSPO3Q9BXY4 272 aaPredicted RBP13.62□□□□□ -0.23
CLIP2-203ENST00000395060 MIEF1Q9NQG6 463 aa13.62□□□□□ -0.23
CLIP2-203ENST00000395060 SEMA3GQ9NS98 782 aa13.62□□□□□ -0.23
CLIP2-203ENST00000395060 PCDHB7Q9Y5E2 793 aa13.62□□□□□ -0.23
CLIP2-203ENST00000395060 TRBV5-4A0A0C4DH59 114 aa13.62□□□□□ -0.23
CLIP2-203ENST00000395060 CD8B2A6NJW9 211 aa13.62□□□□□ -0.23
CLIP2-203ENST00000395060 WASHC1A8K0Z3 465 aa13.62□□□□□ -0.23
CLIP2-203ENST00000395060 GTPBP1O00178 669 aaKnown RBP13.62□□□□□ -0.23
CLIP2-203ENST00000395060 POLR1CO15160 346 aaPredicted RBP13.62□□□□□ -0.23
CLIP2-203ENST00000395060 HRO43593 1189 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 183.9 ms