RNA–Protein interactions for RNA: ENST00000394892.2

ATG4A-205, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 3

Gene ATG4A, Length 935 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-205ENST00000394892 OR8D2Q9GZM6 311 aa8.21□□□□□ -1.1
ATG4A-205ENST00000394892 NOL11Q9H8H0 719 aaKnown RBP8.21□□□□□ -1.1
ATG4A-205ENST00000394892 IPPKQ9H8X2 491 aa8.21□□□□□ -1.1
ATG4A-205ENST00000394892 PROK2Q9HC23 129 aa8.21□□□□□ -1.1
ATG4A-205ENST00000394892 SH2D2AQ9NP31 389 aa8.21□□□□□ -1.1
ATG4A-205ENST00000394892 SEMA4BQ9NPR2 832 aaPredicted RBP8.21□□□□□ -1.1
ATG4A-205ENST00000394892 MYOTQ9UBF9 498 aa8.21□□□□□ -1.1
ATG4A-205ENST00000394892 XPR1Q9UBH6 696 aa8.21□□□□□ -1.1
ATG4A-205ENST00000394892 PCTPQ9UKL6 214 aa8.21□□□□□ -1.1
ATG4A-205ENST00000394892 LRBAP50851 2863 aa8.2□□□□□ -1.1
ATG4A-205ENST00000394892 SCN2AQ99250 2005 aa8.2□□□□□ -1.1
ATG4A-205ENST00000394892 ANKRD17O75179 2603 aaKnown RBP8.2□□□□□ -1.1
ATG4A-205ENST00000394892 A0A088AWK7 358 aa8.2□□□□□ -1.1
ATG4A-205ENST00000394892 CCDC189A1A4V9 331 aa8.2□□□□□ -1.1
ATG4A-205ENST00000394892 GLOD5A6NK44 160 aa8.2□□□□□ -1.1
ATG4A-205ENST00000394892 SYCE1LA8MT33 242 aa8.2□□□□□ -1.1
ATG4A-205ENST00000394892 C17orf105B2RV13 164 aa8.2□□□□□ -1.1
ATG4A-205ENST00000394892 POC1B-GALNT4F8VUJ3 575 aa8.2□□□□□ -1.1
ATG4A-205ENST00000394892 CDK2AP1O14519 115 aa8.2□□□□□ -1.1
ATG4A-205ENST00000394892 HS6ST1O60243 411 aa8.2□□□□□ -1.1
ATG4A-205ENST00000394892 GLSO94925 669 aaPredicted RBP8.2□□□□□ -1.1
ATG4A-205ENST00000394892 AIFM1O95831 613 aa8.2□□□□□ -1.1
ATG4A-205ENST00000394892 IFNA16P05015 189 aa8.2□□□□□ -1.1
ATG4A-205ENST00000394892 RPS17P08708 135 aaKnown RBP8.2□□□□□ -1.1
ATG4A-205ENST00000394892 ESRRAP11474 423 aaPredicted RBP8.2□□□□□ -1.1
ATG4A-205ENST00000394892 TSPAN8P19075 237 aa8.2□□□□□ -1.1
ATG4A-205ENST00000394892 ZNF10P21506 573 aaPredicted RBP8.2□□□□□ -1.1
ATG4A-205ENST00000394892 CPN2P22792 545 aa8.2□□□□□ -1.1
ATG4A-205ENST00000394892 SSTR2P30874 369 aa8.2□□□□□ -1.1
ATG4A-205ENST00000394892 STT3AP46977 705 aa8.2□□□□□ -1.1
ATG4A-205ENST00000394892 SSR4P51571 173 aa8.2□□□□□ -1.1
ATG4A-205ENST00000394892 SMSP52788 366 aa8.2□□□□□ -1.1
ATG4A-205ENST00000394892 CDH13P55290 713 aa8.2□□□□□ -1.1
ATG4A-205ENST00000394892 RNF4P78317 190 aa8.2□□□□□ -1.1
ATG4A-205ENST00000394892 TNFRSF17Q02223 184 aa8.2□□□□□ -1.1
ATG4A-205ENST00000394892 FOLH1Q04609 750 aa8.2□□□□□ -1.1
ATG4A-205ENST00000394892 ZNF630Q2M218 657 aaPredicted RBP8.2□□□□□ -1.1
ATG4A-205ENST00000394892 AP5B1Q2VPB7 878 aa8.2□□□□□ -1.1
ATG4A-205ENST00000394892 KRTCAP3Q53RY4 240 aa8.2□□□□□ -1.1
ATG4A-205ENST00000394892 LETMD1Q6P1Q0 360 aa8.2□□□□□ -1.1
ATG4A-205ENST00000394892 XKRXQ6PP77 449 aa8.2□□□□□ -1.1
ATG4A-205ENST00000394892 IL20RBQ6UXL0 311 aa8.2□□□□□ -1.1
ATG4A-205ENST00000394892 HSDL2Q6YN16 418 aa8.2□□□□□ -1.1
ATG4A-205ENST00000394892 CHSY3Q70JA7 882 aa8.2□□□□□ -1.1
ATG4A-205ENST00000394892 CCDC91Q7Z6B0 441 aa8.2□□□□□ -1.1
ATG4A-205ENST00000394892 GPR180Q86V85 440 aa8.2□□□□□ -1.1
ATG4A-205ENST00000394892 MYLK4Q86YV6 388 aaPredicted RBP8.2□□□□□ -1.1
ATG4A-205ENST00000394892 CYP4Z2PQ8N1L4 340 aa8.2□□□□□ -1.1
ATG4A-205ENST00000394892 TMEM132CQ8N3T6 1108 aa8.2□□□□□ -1.1
ATG4A-205ENST00000394892 RPRMLQ8N4K4 120 aa8.2□□□□□ -1.1
ATG4A-205ENST00000394892 MORN4Q8NDC4 146 aa8.2□□□□□ -1.1
ATG4A-205ENST00000394892 SRFBP1Q8NEF9 429 aaKnown RBP8.2□□□□□ -1.1
ATG4A-205ENST00000394892 MZB1Q8WU39 189 aa8.2□□□□□ -1.1
ATG4A-205ENST00000394892 UBE2E3Q969T4 207 aa8.2□□□□□ -1.1
ATG4A-205ENST00000394892 RGMAQ96B86 450 aa8.2□□□□□ -1.1
ATG4A-205ENST00000394892 DMRTA2Q96SC8 542 aa8.2□□□□□ -1.1
ATG4A-205ENST00000394892 FMO2Q99518 471 aa8.2□□□□□ -1.1
ATG4A-205ENST00000394892 RPF2Q9H7B2 306 aaKnown RBP8.2□□□□□ -1.1
ATG4A-205ENST00000394892 DDX31Q9H8H2 851 aaKnown RBP8.2□□□□□ -1.1
ATG4A-205ENST00000394892 ACTR8Q9H981 624 aa8.2□□□□□ -1.1
ATG4A-205ENST00000394892 COPS7BQ9H9Q2 264 aaPredicted RBP8.2□□□□□ -1.1
ATG4A-205ENST00000394892 FARSBQ9NSD9 589 aaKnown RBP8.2□□□□□ -1.1
ATG4A-205ENST00000394892 TEX10Q9NXF1 929 aaPredicted RBP8.2□□□□□ -1.1
ATG4A-205ENST00000394892 ZNF180Q9UJW8 692 aa8.2□□□□□ -1.1
ATG4A-205ENST00000394892 NFU1Q9UMS0 254 aa8.2□□□□□ -1.1
ATG4A-205ENST00000394892 YARS2Q9Y2Z4 477 aaKnown RBP8.2□□□□□ -1.1
ATG4A-205ENST00000394892 MEMO1Q9Y316 297 aa8.2□□□□□ -1.1
ATG4A-205ENST00000394892 LIPGQ9Y5X9 500 aa8.2□□□□□ -1.1
ATG4A-205ENST00000394892 CLCA3PQ9Y6N3 262 aa8.2□□□□□ -1.1
ATG4A-205ENST00000394892 A0A1B0GTH9 108 aa8.19□□□□□ -1.1
ATG4A-205ENST00000394892 A8MT66 165 aa8.19□□□□□ -1.1
ATG4A-205ENST00000394892 STX16-NPEPL1H3BU86 382 aa8.19□□□□□ -1.1
ATG4A-205ENST00000394892 FOXE1O00358 373 aaPredicted RBP8.19□□□□□ -1.1
ATG4A-205ENST00000394892 STX16O14662 325 aa8.19□□□□□ -1.1
ATG4A-205ENST00000394892 UGDHO60701 494 aa8.19□□□□□ -1.1
ATG4A-205ENST00000394892 KRT38O76015 456 aa8.19□□□□□ -1.1
ATG4A-205ENST00000394892 MLYCDO95822 493 aa8.19□□□□□ -1.1
ATG4A-205ENST00000394892 INHBAP08476 426 aa8.19□□□□□ -1.1
ATG4A-205ENST00000394892 SNRPB2P08579 225 aaKnown RBP8.19□□□□□ -1.1
ATG4A-205ENST00000394892 CELA3AP09093 270 aa8.19□□□□□ -1.1
ATG4A-205ENST00000394892 CT62P0C5K7 136 aa8.19□□□□□ -1.1
ATG4A-205ENST00000394892 FAM58BPP0C7Q3 252 aa8.19□□□□□ -1.1
ATG4A-205ENST00000394892 CTAGE8P0CG41 777 aa8.19□□□□□ -1.1
ATG4A-205ENST00000394892 CCL3P10147 92 aa8.19□□□□□ -1.1
ATG4A-205ENST00000394892 CHN1P15882 459 aa8.19□□□□□ -1.1
ATG4A-205ENST00000394892 ZNF24P17028 368 aa8.19□□□□□ -1.1
ATG4A-205ENST00000394892 CAPN3P20807 821 aa8.19□□□□□ -1.1
ATG4A-205ENST00000394892 S1PR1P21453 382 aa8.19□□□□□ -1.1
ATG4A-205ENST00000394892 PTX3P26022 381 aaPredicted RBP8.19□□□□□ -1.1
ATG4A-205ENST00000394892 SERPINB1P30740 379 aa8.19□□□□□ -1.1
ATG4A-205ENST00000394892 PHBP35232 272 aa8.19□□□□□ -1.1
ATG4A-205ENST00000394892 KIR3DL1P43629 444 aa8.19□□□□□ -1.1
ATG4A-205ENST00000394892 DUSP2Q05923 314 aa8.19□□□□□ -1.1
ATG4A-205ENST00000394892 TGM3Q08188 693 aa8.19□□□□□ -1.1
ATG4A-205ENST00000394892 ASPHQ12797 758 aa8.19□□□□□ -1.1
ATG4A-205ENST00000394892 STX4Q12846 297 aa8.19□□□□□ -1.1
ATG4A-205ENST00000394892 DUSP8Q13202 625 aa8.19□□□□□ -1.1
ATG4A-205ENST00000394892 CUL3Q13618 768 aa8.19□□□□□ -1.1
ATG4A-205ENST00000394892 ZNF791Q3KP31 576 aaPredicted RBP8.19□□□□□ -1.1
ATG4A-205ENST00000394892 UNC50Q53HI1 259 aa8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms