RNA–Protein interactions for RNA: ENST00000394803.9

UBE2D3-208, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene UBE2D3, Length 2,227 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-208ENST00000394803 MZT2BQ6NZ67 158 aa9.56□□□□□ -0.88
UBE2D3-208ENST00000394803 Q6ZVL8 140 aa9.56□□□□□ -0.88
UBE2D3-208ENST00000394803 ARMCX6Q7L4S7 300 aa9.56□□□□□ -0.88
UBE2D3-208ENST00000394803 DDX53Q86TM3 631 aaKnown RBP9.56□□□□□ -0.88
UBE2D3-208ENST00000394803 GALNT12Q8IXK2 581 aa9.56□□□□□ -0.88
UBE2D3-208ENST00000394803 GPR151Q8TDV0 419 aa9.56□□□□□ -0.88
UBE2D3-208ENST00000394803 ZNF480Q8WV37 535 aa9.56□□□□□ -0.88
UBE2D3-208ENST00000394803 SCAMP4Q969E2 229 aa9.56□□□□□ -0.88
UBE2D3-208ENST00000394803 CIDECQ96AQ7 238 aaPredicted RBP9.56□□□□□ -0.88
UBE2D3-208ENST00000394803 ZNF689Q96CS4 500 aaPredicted RBP9.56□□□□□ -0.88
UBE2D3-208ENST00000394803 MSLNLQ96KJ4 702 aa9.56□□□□□ -0.88
UBE2D3-208ENST00000394803 ANKRA2Q9H9E1 313 aa9.56□□□□□ -0.88
UBE2D3-208ENST00000394803 SNTG1Q9NSN8 517 aa9.56□□□□□ -0.88
UBE2D3-208ENST00000394803 REV1Q9UBZ9 1251 aa9.56□□□□□ -0.88
UBE2D3-208ENST00000394803 FABP12A6NFH5 140 aa9.56□□□□□ -0.88
UBE2D3-208ENST00000394803 PRAMEF25A6NGN4 478 aa9.56□□□□□ -0.88
UBE2D3-208ENST00000394803 LEFTY2O00292 366 aa9.56□□□□□ -0.88
UBE2D3-208ENST00000394803 PDPK1O15530 556 aa9.56□□□□□ -0.88
UBE2D3-208ENST00000394803 ARHGEF9O43307 516 aa9.56□□□□□ -0.88
UBE2D3-208ENST00000394803 PROM1O43490 865 aa9.56□□□□□ -0.88
UBE2D3-208ENST00000394803 TSPAN19P0C672 248 aa9.56□□□□□ -0.88
UBE2D3-208ENST00000394803 NPPBP16860 134 aa9.56□□□□□ -0.88
UBE2D3-208ENST00000394803 CFL1P23528 166 aaKnown RBP9.56□□□□□ -0.88
UBE2D3-208ENST00000394803 HLA-FP30511 346 aa9.56□□□□□ -0.88
UBE2D3-208ENST00000394803 PPP3R1P63098 170 aa9.56□□□□□ -0.88
UBE2D3-208ENST00000394803 QPRTQ15274 297 aa9.56□□□□□ -0.88
UBE2D3-208ENST00000394803 TBRG1Q3YBR2 411 aa9.56□□□□□ -0.88
UBE2D3-208ENST00000394803 SPDYE7PQ495Y7 208 aa9.56□□□□□ -0.88
UBE2D3-208ENST00000394803 C3orf38Q5JPI3 329 aa9.56□□□□□ -0.88
UBE2D3-208ENST00000394803 LCN1P1Q5VSP4 162 aa9.56□□□□□ -0.88
UBE2D3-208ENST00000394803 TIGD3Q6B0B8 471 aa9.56□□□□□ -0.88
UBE2D3-208ENST00000394803 SYCE2Q6PIF2 218 aa9.56□□□□□ -0.88
UBE2D3-208ENST00000394803 TMEM220Q6QAJ8 160 aa9.56□□□□□ -0.88
UBE2D3-208ENST00000394803 Q6ZVU0 165 aa9.56□□□□□ -0.88
UBE2D3-208ENST00000394803 USP30Q70CQ3 517 aa9.56□□□□□ -0.88
UBE2D3-208ENST00000394803 OTOP2Q7RTS6 562 aa9.56□□□□□ -0.88
UBE2D3-208ENST00000394803 VN1R5Q7Z5H4 357 aa9.56□□□□□ -0.88
UBE2D3-208ENST00000394803 LAPTM4BQ86VI4 370 aa9.56□□□□□ -0.88
UBE2D3-208ENST00000394803 PEX5LQ8IYB4 626 aa9.56□□□□□ -0.88
UBE2D3-208ENST00000394803 CMTM8Q8IZV2 173 aa9.56□□□□□ -0.88
UBE2D3-208ENST00000394803 NLGN4XQ8N0W4 816 aa9.56□□□□□ -0.88
UBE2D3-208ENST00000394803 RASGEF1AQ8N9B8 481 aa9.56□□□□□ -0.88
UBE2D3-208ENST00000394803 ENKURQ8TC29 256 aa9.56□□□□□ -0.88
UBE2D3-208ENST00000394803 FRMD6Q96NE9 622 aa9.56□□□□□ -0.88
UBE2D3-208ENST00000394803 SAMD11Q96NU1 681 aa9.56□□□□□ -0.88
UBE2D3-208ENST00000394803 IL4I1Q96RQ9 567 aa9.56□□□□□ -0.88
UBE2D3-208ENST00000394803 TRAF4Q9BUZ4 470 aaPredicted RBP9.56□□□□□ -0.88
UBE2D3-208ENST00000394803 TEX12Q9BXU0 123 aa9.56□□□□□ -0.88
UBE2D3-208ENST00000394803 PITHD1Q9GZP4 211 aaPredicted RBP9.56□□□□□ -0.88
UBE2D3-208ENST00000394803 MIR1-1HGQ9H1L0 117 aa9.56□□□□□ -0.88
UBE2D3-208ENST00000394803 RMI1Q9H9A7 625 aa9.56□□□□□ -0.88
UBE2D3-208ENST00000394803 TRPV5Q9NQA5 729 aa9.56□□□□□ -0.88
UBE2D3-208ENST00000394803 SEMA3GQ9NS98 782 aa9.56□□□□□ -0.88
UBE2D3-208ENST00000394803 TAS2R16Q9NYV7 291 aa9.56□□□□□ -0.88
UBE2D3-208ENST00000394803 MBD1Q9UIS9 605 aaPredicted RBP9.56□□□□□ -0.88
UBE2D3-208ENST00000394803 SLC9A8Q9Y2E8 581 aa9.56□□□□□ -0.88
UBE2D3-208ENST00000394803 KIF26AQ9ULI4 1882 aaPredicted RBP9.55□□□□□ -0.88
UBE2D3-208ENST00000394803 NUP214P35658 2090 aaPredicted RBP9.55□□□□□ -0.88
UBE2D3-208ENST00000394803 C17orf113A0A1B0GUU1 675 aa9.55□□□□□ -0.88
UBE2D3-208ENST00000394803 TMEM129A0AVI4 362 aa9.55□□□□□ -0.88
UBE2D3-208ENST00000394803 TMCC2O75069 709 aa9.55□□□□□ -0.88
UBE2D3-208ENST00000394803 FGF19O95750 216 aa9.55□□□□□ -0.88
UBE2D3-208ENST00000394803 TGFB1P01137 390 aa9.55□□□□□ -0.88
UBE2D3-208ENST00000394803 KLK1P06870 262 aa9.55□□□□□ -0.88
UBE2D3-208ENST00000394803 IL3P08700 152 aa9.55□□□□□ -0.88
UBE2D3-208ENST00000394803 ELFN1P0C7U0 828 aa9.55□□□□□ -0.88
UBE2D3-208ENST00000394803 DDCP20711 480 aa9.55□□□□□ -0.88
UBE2D3-208ENST00000394803 DDX6P26196 483 aaKnown RBP eCLIP9.55□□□□□ -0.883e-8■□□□□ 10.6
UBE2D3-208ENST00000394803 HLA-DMAP28067 261 aa9.55□□□□□ -0.88
UBE2D3-208ENST00000394803 RCVRNP35243 200 aa9.55□□□□□ -0.88
UBE2D3-208ENST00000394803 HSD17B2P37059 387 aa9.55□□□□□ -0.88
UBE2D3-208ENST00000394803 PREPP48147 710 aa9.55□□□□□ -0.88
UBE2D3-208ENST00000394803 SMSP52788 366 aa9.55□□□□□ -0.88
UBE2D3-208ENST00000394803 NKX2-5P52952 324 aaPredicted RBP9.55□□□□□ -0.88
UBE2D3-208ENST00000394803 CRISP3P54108 245 aa9.55□□□□□ -0.88
UBE2D3-208ENST00000394803 RAB25P57735 213 aa9.55□□□□□ -0.88
UBE2D3-208ENST00000394803 CYP4F8P98187 520 aa9.55□□□□□ -0.88
UBE2D3-208ENST00000394803 UBE3AQ05086 875 aa9.55□□□□□ -0.88
UBE2D3-208ENST00000394803 LCTLQ6UWM7 567 aa9.55□□□□□ -0.88
UBE2D3-208ENST00000394803 TMIGD1Q6UXZ0 262 aa9.55□□□□□ -0.88
UBE2D3-208ENST00000394803 CCDC149Q6ZUS6 474 aa9.55□□□□□ -0.88
UBE2D3-208ENST00000394803 NANOGNBQ7Z5D8 188 aa9.55□□□□□ -0.88
UBE2D3-208ENST00000394803 PHC2Q8IXK0 858 aa9.55□□□□□ -0.88
UBE2D3-208ENST00000394803 RDH10Q8IZV5 341 aa9.55□□□□□ -0.88
UBE2D3-208ENST00000394803 OR2A12Q8NGT7 310 aa9.55□□□□□ -0.88
UBE2D3-208ENST00000394803 OR5AK3PQ8NH89 298 aa9.55□□□□□ -0.88
UBE2D3-208ENST00000394803 APOBEC4Q8WW27 367 aaKnown RBP9.55□□□□□ -0.88
UBE2D3-208ENST00000394803 VOPP1Q96AW1 172 aa9.55□□□□□ -0.88
UBE2D3-208ENST00000394803 AP2M1Q96CW1 435 aa9.55□□□□□ -0.88
UBE2D3-208ENST00000394803 ZBED6CLQ96FA7 236 aaPredicted RBP9.55□□□□□ -0.88
UBE2D3-208ENST00000394803 ST6GAL2Q96JF0 529 aa9.55□□□□□ -0.88
UBE2D3-208ENST00000394803 ZIC5Q96T25 663 aa9.55□□□□□ -0.88
UBE2D3-208ENST00000394803 NELL2Q99435 816 aa9.55□□□□□ -0.88
UBE2D3-208ENST00000394803 DIABLOQ9NR28 239 aa9.55□□□□□ -0.88
UBE2D3-208ENST00000394803 P2RX2Q9UBL9 471 aa9.55□□□□□ -0.88
UBE2D3-208ENST00000394803 SEC14L3Q9UDX4 400 aa9.55□□□□□ -0.88
UBE2D3-208ENST00000394803 ACSL6Q9UKU0 697 aa9.55□□□□□ -0.88
UBE2D3-208ENST00000394803 ACAD8Q9UKU7 415 aa9.55□□□□□ -0.88
UBE2D3-208ENST00000394803 CLEC4EQ9ULY5 219 aa9.55□□□□□ -0.88
UBE2D3-208ENST00000394803 EXOSC1Q9Y3B2 195 aaKnown RBP9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms