RNA–Protein interactions for RNA: ENST00000393454.6

TDP1-203, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TDP1, Length 2,068 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-203ENST00000393454 SGK494L7N484 410 aa8.16□□□□□ -1.1
TDP1-203ENST00000393454 B4GAT1O43505 415 aa8.16□□□□□ -1.1
TDP1-203ENST00000393454 SRPX2O60687 465 aaPredicted RBP8.16□□□□□ -1.1
TDP1-203ENST00000393454 GALR3O60755 368 aaPredicted RBP8.16□□□□□ -1.1
TDP1-203ENST00000393454 RETP07949 1114 aa8.16□□□□□ -1.1
TDP1-203ENST00000393454 GIMD1P0DJR0 217 aa8.16□□□□□ -1.1
TDP1-203ENST00000393454 RAP2AP10114 183 aa8.16□□□□□ -1.1
TDP1-203ENST00000393454 AQP1P29972 269 aa8.16□□□□□ -1.1
TDP1-203ENST00000393454 MPIP34949 423 aa8.16□□□□□ -1.1
TDP1-203ENST00000393454 FRKP42685 505 aaPredicted RBP8.16□□□□□ -1.1
TDP1-203ENST00000393454 GPR3P46089 330 aa8.16□□□□□ -1.1
TDP1-203ENST00000393454 SEPHS1P49903 392 aa8.16□□□□□ -1.1
TDP1-203ENST00000393454 RPS26P62854 115 aaKnown RBP8.16□□□□□ -1.1
TDP1-203ENST00000393454 SIM1P81133 766 aaPredicted RBP8.16□□□□□ -1.1
TDP1-203ENST00000393454 FADDQ13158 208 aa8.16□□□□□ -1.1
TDP1-203ENST00000393454 SFT2D3Q587I9 215 aa8.16□□□□□ -1.1
TDP1-203ENST00000393454 WLSQ5T9L3 541 aa8.16□□□□□ -1.1
TDP1-203ENST00000393454 IRAK1BP1Q5VVH5 260 aa8.16□□□□□ -1.1
TDP1-203ENST00000393454 GPR155Q7Z3F1 870 aa8.16□□□□□ -1.1
TDP1-203ENST00000393454 GALNT10Q86SR1 603 aa8.16□□□□□ -1.1
TDP1-203ENST00000393454 PDSS2Q86YH6 399 aa8.16□□□□□ -1.1
TDP1-203ENST00000393454 PLXDC1Q8IUK5 500 aa8.16□□□□□ -1.1
TDP1-203ENST00000393454 TMEM126BQ8IUX1 230 aa8.16□□□□□ -1.1
TDP1-203ENST00000393454 GALNT4Q8N4A0 578 aa8.16□□□□□ -1.1
TDP1-203ENST00000393454 FAM86B1Q8N7N1 296 aa8.16□□□□□ -1.1
TDP1-203ENST00000393454 ADCY4Q8NFM4 1077 aa8.16□□□□□ -1.1
TDP1-203ENST00000393454 OR5T3Q8NGG3 340 aa8.16□□□□□ -1.1
TDP1-203ENST00000393454 OR10Q1Q8NGQ4 319 aa8.16□□□□□ -1.1
TDP1-203ENST00000393454 COL26A1Q96A83 441 aa8.16□□□□□ -1.1
TDP1-203ENST00000393454 CNRIP1Q96F85 164 aaPredicted RBP8.16□□□□□ -1.1
TDP1-203ENST00000393454 ZC3H10Q96K80 434 aaKnown RBP8.16□□□□□ -1.1
TDP1-203ENST00000393454 CSF3RQ99062 836 aa8.16□□□□□ -1.1
TDP1-203ENST00000393454 CD180Q99467 661 aa8.16□□□□□ -1.1
TDP1-203ENST00000393454 CHST8Q9H2A9 424 aa8.16□□□□□ -1.1
TDP1-203ENST00000393454 YY1AP1Q9H869 796 aa8.16□□□□□ -1.1
TDP1-203ENST00000393454 SEMA3GQ9NS98 782 aa8.16□□□□□ -1.1
TDP1-203ENST00000393454 GPATCH2Q9NW75 528 aa8.16□□□□□ -1.1
TDP1-203ENST00000393454 MS4A12Q9NXJ0 267 aa8.16□□□□□ -1.1
TDP1-203ENST00000393454 KCMF1Q9P0J7 381 aa8.16□□□□□ -1.1
TDP1-203ENST00000393454 EPHA6Q9UF33 1036 aa8.16□□□□□ -1.1
TDP1-203ENST00000393454 PLCL2Q9UPR0 1127 aa8.16□□□□□ -1.1
TDP1-203ENST00000393454 GMEB1Q9Y692 573 aa8.16□□□□□ -1.1
TDP1-203ENST00000393454 SLC22A7Q9Y694 548 aa8.16□□□□□ -1.1
TDP1-203ENST00000393454 LAMA1P25391 3075 aa8.16□□□□□ -1.1
TDP1-203ENST00000393454 A0A1W2PS29 197 aa8.15□□□□□ -1.1
TDP1-203ENST00000393454 SAC3D1A6NKF1 404 aa8.15□□□□□ -1.1
TDP1-203ENST00000393454 A8MU76 341 aa8.15□□□□□ -1.1
TDP1-203ENST00000393454 PATE3B3GLJ2 98 aa8.15□□□□□ -1.1
TDP1-203ENST00000393454 PEX1O43933 1283 aa8.15□□□□□ -1.1
TDP1-203ENST00000393454 ZBTB11O95625 1053 aaPredicted RBP8.15□□□□□ -1.1
TDP1-203ENST00000393454 LDLRP01130 860 aa8.15□□□□□ -1.1
TDP1-203ENST00000393454 RPSAP08865 295 aaKnown RBP8.15□□□□□ -1.1
TDP1-203ENST00000393454 KDELR2P33947 212 aa8.15□□□□□ -1.1
TDP1-203ENST00000393454 CNR2P34972 360 aa8.15□□□□□ -1.1
TDP1-203ENST00000393454 PCGF2P35227 344 aa8.15□□□□□ -1.1
TDP1-203ENST00000393454 XKP51811 444 aa8.15□□□□□ -1.1
TDP1-203ENST00000393454 MVDP53602 400 aa8.15□□□□□ -1.1
TDP1-203ENST00000393454 PRKAG1P54619 331 aa8.15□□□□□ -1.1
TDP1-203ENST00000393454 AQP4P55087 323 aa8.15□□□□□ -1.1
TDP1-203ENST00000393454 DSTNP60981 165 aa8.15□□□□□ -1.1
TDP1-203ENST00000393454 VAC14Q08AM6 782 aa8.15□□□□□ -1.1
TDP1-203ENST00000393454 SCARB2Q14108 478 aa8.15□□□□□ -1.1
TDP1-203ENST00000393454 VEZF1Q14119 521 aa8.15□□□□□ -1.1
TDP1-203ENST00000393454 MLC1Q15049 377 aa8.15□□□□□ -1.1
TDP1-203ENST00000393454 NR0B2Q15466 257 aa8.15□□□□□ -1.1
TDP1-203ENST00000393454 NDUFA9Q16795 377 aa8.15□□□□□ -1.1
TDP1-203ENST00000393454 SAXO2Q658L1 398 aa8.15□□□□□ -1.1
TDP1-203ENST00000393454 OR52E8Q6IFG1 317 aa8.15□□□□□ -1.1
TDP1-203ENST00000393454 TNFAIP8L2Q6P589 184 aaPredicted RBP8.15□□□□□ -1.1
TDP1-203ENST00000393454 CEACAM20Q6UY09 585 aa8.15□□□□□ -1.1
TDP1-203ENST00000393454 OR4N5Q8IXE1 308 aa8.15□□□□□ -1.1
TDP1-203ENST00000393454 TTC29Q8NA56 475 aaPredicted RBP8.15□□□□□ -1.1
TDP1-203ENST00000393454 PAPD5Q8NDF8 572 aaKnown RBP8.15□□□□□ -1.1
TDP1-203ENST00000393454 OR4K14Q8NGD5 310 aa8.15□□□□□ -1.1
TDP1-203ENST00000393454 OR52E4Q8NGH9 312 aa8.15□□□□□ -1.1
TDP1-203ENST00000393454 OR9A4Q8NGU2 314 aa8.15□□□□□ -1.1
TDP1-203ENST00000393454 NFKBIDQ8NI38 313 aa8.15□□□□□ -1.1
TDP1-203ENST00000393454 SAP25Q8TEE9 199 aa8.15□□□□□ -1.1
TDP1-203ENST00000393454 KLHL6Q8WZ60 621 aa8.15□□□□□ -1.1
TDP1-203ENST00000393454 CCDC74AQ96AQ1 378 aa8.15□□□□□ -1.1
TDP1-203ENST00000393454 NEURL3Q96EH8 262 aa8.15□□□□□ -1.1
TDP1-203ENST00000393454 PYURFQ96I23 114 aa8.15□□□□□ -1.1
TDP1-203ENST00000393454 VPS50Q96JG6 964 aa8.15□□□□□ -1.1
TDP1-203ENST00000393454 CIB1Q99828 191 aa8.15□□□□□ -1.1
TDP1-203ENST00000393454 RAB33BQ9H082 229 aa8.15□□□□□ -1.1
TDP1-203ENST00000393454 VCXQ9H320 206 aa8.15□□□□□ -1.1
TDP1-203ENST00000393454 EPB41L1Q9H4G0 881 aa8.15□□□□□ -1.1
TDP1-203ENST00000393454 LYRM4Q9HD34 91 aa8.15□□□□□ -1.1
TDP1-203ENST00000393454 SIRT3Q9NTG7 399 aaPredicted RBP8.15□□□□□ -1.1
TDP1-203ENST00000393454 ZSCAN32Q9NX65 697 aa8.15□□□□□ -1.1
TDP1-203ENST00000393454 RPS6KA6Q9UK32 745 aa8.15□□□□□ -1.1
TDP1-203ENST00000393454 GMEB2Q9UKD1 530 aa8.15□□□□□ -1.1
TDP1-203ENST00000393454 SAMD4AQ9UPU9 718 aaKnown RBP8.15□□□□□ -1.1
TDP1-203ENST00000393454 AK5Q9Y6K8 562 aa8.15□□□□□ -1.1
TDP1-203ENST00000393454 UNC13CQ8NB66 2214 aa8.15□□□□□ -1.1
TDP1-203ENST00000393454 ARID1BQ8NFD5 2236 aaPredicted RBP8.15□□□□□ -1.1
TDP1-203ENST00000393454 A0A0A6YYC8 382 aaPredicted RBP8.15□□□□□ -1.11
TDP1-203ENST00000393454 HYKKA2RU49 373 aa8.15□□□□□ -1.11
TDP1-203ENST00000393454 I3L1I5 382 aaPredicted RBP8.15□□□□□ -1.11
TDP1-203ENST00000393454 SIGLEC6O43699 453 aa8.15□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms