RNA–Protein interactions for RNA: ENST00000392981.6

XRN1-202, Transcript of 5'-3' exoribonuclease 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene XRN1, Length 5,383 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-202ENST00000392981 UBCP0CG48 685 aaKnown RBP3.35□□□□□ -1.87
XRN1-202ENST00000392981 GOLGA8HP0CJ92 632 aa3.35□□□□□ -1.87
XRN1-202ENST00000392981 ANXA3P12429 323 aa3.35□□□□□ -1.87
XRN1-202ENST00000392981 CD58P19256 250 aa3.35□□□□□ -1.87
XRN1-202ENST00000392981 LHCGRP22888 699 aa3.35□□□□□ -1.87
XRN1-202ENST00000392981 CTGFP29279 349 aa3.35□□□□□ -1.87
XRN1-202ENST00000392981 RPL3P39023 403 aaKnown RBP3.35□□□□□ -1.87
XRN1-202ENST00000392981 ADPRHP54922 357 aa3.35□□□□□ -1.87
XRN1-202ENST00000392981 PEX3P56589 373 aa3.35□□□□□ -1.87
XRN1-202ENST00000392981 HERVK_113P63132 956 aa3.35□□□□□ -1.87
XRN1-202ENST00000392981 FHL3Q13643 280 aa3.35□□□□□ -1.87
XRN1-202ENST00000392981 ADGRE1Q14246 886 aa3.35□□□□□ -1.87
XRN1-202ENST00000392981 HLXQ14774 488 aaPredicted RBP3.35□□□□□ -1.87
XRN1-202ENST00000392981 KLHL22Q53GT1 634 aa3.35□□□□□ -1.87
XRN1-202ENST00000392981 TMEM107Q6UX40 140 aa3.35□□□□□ -1.87
XRN1-202ENST00000392981 LRRC31Q6UY01 552 aa3.35□□□□□ -1.87
XRN1-202ENST00000392981 COPS6Q7L5N1 327 aa3.35□□□□□ -1.87
XRN1-202ENST00000392981 SERPINA11Q86U17 422 aa3.35□□□□□ -1.87
XRN1-202ENST00000392981 KBTBD2Q8IY47 623 aa3.35□□□□□ -1.87
XRN1-202ENST00000392981 SREK1IP1Q8N9Q2 155 aaPredicted RBP3.35□□□□□ -1.87
XRN1-202ENST00000392981 DUX5Q96PT3 197 aa3.35□□□□□ -1.87
XRN1-202ENST00000392981 ERVK-6Q9BXR3 956 aa3.35□□□□□ -1.87
XRN1-202ENST00000392981 FRMD8Q9BZ67 464 aaPredicted RBP3.35□□□□□ -1.87
XRN1-202ENST00000392981 FBXO44Q9H4M3 255 aa3.35□□□□□ -1.87
XRN1-202ENST00000392981 NPTNQ9Y639 398 aa3.35□□□□□ -1.87
XRN1-202ENST00000392981 ALG6Q9Y672 507 aa3.35□□□□□ -1.87
XRN1-202ENST00000392981 R4GN57 208 aa3.35□□□□□ -1.87
XRN1-202ENST00000392981 RAPGEF2Q9Y4G8 1499 aa3.35□□□□□ -1.87
XRN1-202ENST00000392981 TMEM178BH3BS89 294 aa3.35□□□□□ -1.87
XRN1-202ENST00000392981 ZIC3O60481 467 aa3.35□□□□□ -1.87
XRN1-202ENST00000392981 IQCF3P0C7M6 154 aa3.35□□□□□ -1.87
XRN1-202ENST00000392981 PRPS2P11908 318 aa3.35□□□□□ -1.87
XRN1-202ENST00000392981 UQCRBP14927 111 aa3.35□□□□□ -1.87
XRN1-202ENST00000392981 SRD5A1P18405 259 aa3.35□□□□□ -1.87
XRN1-202ENST00000392981 GSTM3P21266 225 aa3.35□□□□□ -1.87
XRN1-202ENST00000392981 GCSHP23434 173 aa3.35□□□□□ -1.87
XRN1-202ENST00000392981 GATA4P43694 442 aa3.35□□□□□ -1.87
XRN1-202ENST00000392981 INPP1P49441 399 aa3.35□□□□□ -1.87
XRN1-202ENST00000392981 RAB11AP62491 216 aa3.35□□□□□ -1.87
XRN1-202ENST00000392981 OCA2Q04671 838 aa3.35□□□□□ -1.87
XRN1-202ENST00000392981 SLC18A2Q05940 514 aa3.35□□□□□ -1.87
XRN1-202ENST00000392981 DRP2Q13474 957 aa3.35□□□□□ -1.87
XRN1-202ENST00000392981 RAB11BQ15907 218 aa3.35□□□□□ -1.87
XRN1-202ENST00000392981 PTGISQ16647 500 aa3.35□□□□□ -1.87
XRN1-202ENST00000392981 CYP1B1Q16678 543 aa3.35□□□□□ -1.87
XRN1-202ENST00000392981 CERKLQ49MI3 558 aaPredicted RBP3.35□□□□□ -1.87
XRN1-202ENST00000392981 BTNL8Q6UX41 500 aa3.35□□□□□ -1.87
XRN1-202ENST00000392981 SHFQ7M4L6 423 aa3.35□□□□□ -1.87
XRN1-202ENST00000392981 ADIPOR2Q86V24 386 aa3.35□□□□□ -1.87
XRN1-202ENST00000392981 LZICQ8WZA0 190 aa3.35□□□□□ -1.87
XRN1-202ENST00000392981 MUS81Q96NY9 551 aa3.35□□□□□ -1.87
XRN1-202ENST00000392981 RIT2Q99578 217 aa3.35□□□□□ -1.87
XRN1-202ENST00000392981 SHCBP1LQ9BZQ2 653 aa3.35□□□□□ -1.87
XRN1-202ENST00000392981 HAPLN2Q9GZV7 340 aa3.35□□□□□ -1.87
XRN1-202ENST00000392981 BATF3Q9NR55 127 aa3.35□□□□□ -1.87
XRN1-202ENST00000392981 ABCB10Q9NRK6 738 aa3.35□□□□□ -1.87
XRN1-202ENST00000392981 PISDQ9UG56 409 aa3.35□□□□□ -1.87
XRN1-202ENST00000392981 UHRF1BP1LA0JNW5 1464 aa3.35□□□□□ -1.87
XRN1-202ENST00000392981 ZNF804BA4D1E1 1349 aa3.35□□□□□ -1.87
XRN1-202ENST00000392981 MYO3BQ8WXR4 1341 aa3.35□□□□□ -1.87
XRN1-202ENST00000392981 SERPINE3A8MV23 424 aa3.34□□□□□ -1.87
XRN1-202ENST00000392981 FCN1O00602 326 aa3.34□□□□□ -1.87
XRN1-202ENST00000392981 ZSCAN12O43309 604 aa3.34□□□□□ -1.87
XRN1-202ENST00000392981 PSTPIP1O43586 416 aa3.34□□□□□ -1.87
XRN1-202ENST00000392981 NCR1O76036 304 aa3.34□□□□□ -1.87
XRN1-202ENST00000392981 AP2A2O94973 939 aa3.34□□□□□ -1.87
XRN1-202ENST00000392981 ADRB1P08588 477 aa3.34□□□□□ -1.87
XRN1-202ENST00000392981 TUBG1P23258 451 aa3.34□□□□□ -1.87
XRN1-202ENST00000392981 HRH2P25021 359 aa3.34□□□□□ -1.87
XRN1-202ENST00000392981 CSNK1EP49674 416 aaKnown RBP3.34□□□□□ -1.87
XRN1-202ENST00000392981 NDST2P52849 883 aa3.34□□□□□ -1.87
XRN1-202ENST00000392981 HNRNPKP61978 463 aaKnown RBP eCLIP3.34□□□□□ -1.87
XRN1-202ENST00000392981 TMEM132DQ14C87 1099 aa3.34□□□□□ -1.87
XRN1-202ENST00000392981 PHKG1Q16816 387 aa3.34□□□□□ -1.87
XRN1-202ENST00000392981 PARP6Q2NL67 630 aa3.34□□□□□ -1.87
XRN1-202ENST00000392981 PDLIM3Q53GG5 364 aaPredicted RBP3.34□□□□□ -1.87
XRN1-202ENST00000392981 ZNF793Q6ZN11 406 aa3.34□□□□□ -1.87
XRN1-202ENST00000392981 LINC00523Q86TU6 105 aa3.34□□□□□ -1.87
XRN1-202ENST00000392981 ADHFE1Q8IWW8 467 aa3.34□□□□□ -1.87
XRN1-202ENST00000392981 SLC35F2Q8IXU6 374 aa3.34□□□□□ -1.87
XRN1-202ENST00000392981 RELL2Q8NC24 303 aaPredicted RBP3.34□□□□□ -1.87
XRN1-202ENST00000392981 SCFD1Q8WVM8 642 aa3.34□□□□□ -1.87
XRN1-202ENST00000392981 CDKL2Q92772 493 aa3.34□□□□□ -1.87
XRN1-202ENST00000392981 DVL3Q92997 716 aaPredicted RBP3.34□□□□□ -1.87
XRN1-202ENST00000392981 APH1AQ96BI3 265 aa3.34□□□□□ -1.87
XRN1-202ENST00000392981 MRPL38Q96DV4 380 aaKnown RBP3.34□□□□□ -1.87
XRN1-202ENST00000392981 GNRHR2Q96P88 292 aa3.34□□□□□ -1.87
XRN1-202ENST00000392981 TUBG2Q9NRH3 451 aa3.34□□□□□ -1.87
XRN1-202ENST00000392981 ANKRD10Q9NXR5 420 aa3.34□□□□□ -1.87
XRN1-202ENST00000392981 SMARCAL1Q9NZC9 954 aa3.34□□□□□ -1.87
XRN1-202ENST00000392981 OR6C2Q9NZP2 312 aa3.34□□□□□ -1.87
XRN1-202ENST00000392981 ZNF518AQ6AHZ1 1483 aa3.34□□□□□ -1.87
XRN1-202ENST00000392981 CEP152O94986 1710 aa3.34□□□□□ -1.87
XRN1-202ENST00000392981 A0A087WV48 116 aa3.34□□□□□ -1.87
XRN1-202ENST00000392981 PRYO14603 147 aa3.34□□□□□ -1.87
XRN1-202ENST00000392981 HMGB3O15347 200 aaKnown RBP3.34□□□□□ -1.87
XRN1-202ENST00000392981 SPINT2O43291 252 aa3.34□□□□□ -1.87
XRN1-202ENST00000392981 GPAA1O43292 621 aa3.34□□□□□ -1.87
XRN1-202ENST00000392981 CSDE1O75534 798 aaKnown RBP3.34□□□□□ -1.87
XRN1-202ENST00000392981 ATP5C1P36542 298 aaKnown RBP3.34□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 126.7 ms