RNA–Protein interactions for RNA: ENST00000389629.8

RTF1-201, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTF1, Length 5,021 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-201ENST00000389629 TM9SF2Q99805 663 aa13.64□□□□□ -0.23
RTF1-201ENST00000389629 IKZF2Q9UKS7 526 aa13.64□□□□□ -0.23
RTF1-201ENST00000389629 M0QZQ0 153 aa13.64□□□□□ -0.23
RTF1-201ENST00000389629 HPGDSO60760 199 aa13.64□□□□□ -0.23
RTF1-201ENST00000389629 LAMP2P13473 410 aa13.64□□□□□ -0.23
RTF1-201ENST00000389629 CRISP3P54108 245 aa13.64□□□□□ -0.23
RTF1-201ENST00000389629 CTBSQ01459 385 aa13.64□□□□□ -0.23
RTF1-201ENST00000389629 SLC14A2Q15849 920 aa13.64□□□□□ -0.23
RTF1-201ENST00000389629 IQCF2Q8IXL9 164 aa13.64□□□□□ -0.23
RTF1-201ENST00000389629 UBQLNLQ8IYU4 475 aa13.64□□□□□ -0.23
RTF1-201ENST00000389629 DBF4BQ8NFT6 615 aa13.64□□□□□ -0.23
RTF1-201ENST00000389629 CEP76Q8TAP6 659 aa13.64□□□□□ -0.23
RTF1-201ENST00000389629 SCAMP4Q969E2 229 aa13.64□□□□□ -0.23
RTF1-201ENST00000389629 DOK1Q99704 481 aa13.64□□□□□ -0.23
RTF1-201ENST00000389629 GPR62Q9BZJ7 368 aa13.64□□□□□ -0.23
RTF1-201ENST00000389629 NTN4Q9HB63 628 aa13.64□□□□□ -0.23
RTF1-201ENST00000389629 SH3D21A4FU49 640 aa13.64□□□□□ -0.23
RTF1-201ENST00000389629 EIF3FO00303 357 aaPredicted RBP13.64□□□□□ -0.23
RTF1-201ENST00000389629 SCO1O75880 301 aa13.64□□□□□ -0.23
RTF1-201ENST00000389629 ECDO95905 644 aaPredicted RBP13.64□□□□□ -0.23
RTF1-201ENST00000389629 JUPP14923 745 aa13.64□□□□□ -0.23
RTF1-201ENST00000389629 BPIP17213 487 aa13.64□□□□□ -0.23
RTF1-201ENST00000389629 EPHA2P29317 976 aa13.64□□□□□ -0.23
RTF1-201ENST00000389629 ZNF763Q0D2J5 394 aa13.64□□□□□ -0.23
RTF1-201ENST00000389629 SNTB2Q13425 540 aaKnown RBP13.64□□□□□ -0.23
RTF1-201ENST00000389629 GALEQ14376 348 aa13.64□□□□□ -0.23
RTF1-201ENST00000389629 ZNF311Q5JNZ3 666 aa13.64□□□□□ -0.23
RTF1-201ENST00000389629 TSPAN33Q86UF1 283 aa13.64□□□□□ -0.23
RTF1-201ENST00000389629 SH3RF2Q8TEC5 729 aa13.64□□□□□ -0.23
RTF1-201ENST00000389629 TRMT61BQ9BVS5 477 aaKnown RBP13.64□□□□□ -0.23
RTF1-201ENST00000389629 OR51I1Q9H343 314 aa13.64□□□□□ -0.23
RTF1-201ENST00000389629 REEP4Q9H6H4 257 aa13.64□□□□□ -0.23
RTF1-201ENST00000389629 FBXW2Q9UKT8 454 aa13.64□□□□□ -0.23
RTF1-201ENST00000389629 H3BSH0 61 aa13.64□□□□□ -0.23
RTF1-201ENST00000389629 ZNF623O75123 536 aa13.64□□□□□ -0.23
RTF1-201ENST00000389629 STATHP02808 62 aa13.64□□□□□ -0.23
RTF1-201ENST00000389629 LHCGRP22888 699 aa13.64□□□□□ -0.23
RTF1-201ENST00000389629 LEXMQ3ZCV2 418 aa13.64□□□□□ -0.23
RTF1-201ENST00000389629 FNDC3BQ53EP0 1204 aaKnown RBP13.64□□□□□ -0.23
RTF1-201ENST00000389629 PYCR3Q53H96 274 aa13.64□□□□□ -0.23
RTF1-201ENST00000389629 SLC36A4Q6YBV0 504 aa13.64□□□□□ -0.23
RTF1-201ENST00000389629 SERPINA11Q86U17 422 aa13.64□□□□□ -0.23
RTF1-201ENST00000389629 RIMKLAQ8IXN7 391 aa13.64□□□□□ -0.23
RTF1-201ENST00000389629 C3orf14Q9HBI5 128 aa13.64□□□□□ -0.23
RTF1-201ENST00000389629 IL26Q9NPH9 171 aa13.64□□□□□ -0.23
RTF1-201ENST00000389629 PRSS21Q9Y6M0 314 aa13.64□□□□□ -0.23
RTF1-201ENST00000389629 WASHC1A8K0Z3 465 aa13.63□□□□□ -0.23
RTF1-201ENST00000389629 GFRA2O00451 464 aa13.63□□□□□ -0.23
RTF1-201ENST00000389629 IER5LQ5T953 404 aa13.63□□□□□ -0.23
RTF1-201ENST00000389629 MTFR2Q6P444 385 aa13.63□□□□□ -0.23
RTF1-201ENST00000389629 RD3Q7Z3Z2 195 aa13.63□□□□□ -0.23
RTF1-201ENST00000389629 TAF8Q7Z7C8 310 aa13.63□□□□□ -0.23
RTF1-201ENST00000389629 MEX3DQ86XN8 651 aaKnown RBP13.63□□□□□ -0.23
RTF1-201ENST00000389629 ZBED6CLQ96FA7 236 aaPredicted RBP13.63□□□□□ -0.23
RTF1-201ENST00000389629 ZNF300Q96RE9 604 aaPredicted RBP13.63□□□□□ -0.23
RTF1-201ENST00000389629 ARL6Q9H0F7 186 aa13.63□□□□□ -0.23
RTF1-201ENST00000389629 H2AFB2P0C5Z0 115 aa13.63□□□□□ -0.23
RTF1-201ENST00000389629 HTR3AP46098 478 aa13.63□□□□□ -0.23
RTF1-201ENST00000389629 CAPZA2P47755 286 aa13.63□□□□□ -0.23
RTF1-201ENST00000389629 SELENOWP63302 87 aa13.63□□□□□ -0.23
RTF1-201ENST00000389629 ARF5P84085 180 aa13.63□□□□□ -0.23
RTF1-201ENST00000389629 ATXN7L3Q14CW9 347 aaPredicted RBP13.63□□□□□ -0.23
RTF1-201ENST00000389629 RGNQ15493 299 aa13.63□□□□□ -0.23
RTF1-201ENST00000389629 CELF5Q8N6W0 485 aaKnown RBP13.63□□□□□ -0.23
RTF1-201ENST00000389629 EFCAB11Q9BUY7 163 aa13.63□□□□□ -0.23
RTF1-201ENST00000389629 BTBD1Q9H0C5 482 aa13.63□□□□□ -0.23
RTF1-201ENST00000389629 IKZF5Q9H5V7 419 aa13.63□□□□□ -0.23
RTF1-201ENST00000389629 ZNF879B4DU55 563 aa13.63□□□□□ -0.23
RTF1-201ENST00000389629 J3KTA2 159 aa13.63□□□□□ -0.23
RTF1-201ENST00000389629 OR1F1O43749 312 aa13.63□□□□□ -0.23
RTF1-201ENST00000389629 IFNGP01579 166 aa13.63□□□□□ -0.23
RTF1-201ENST00000389629 MMP2P08253 660 aa13.63□□□□□ -0.23
RTF1-201ENST00000389629 HK1P19367 917 aa13.63□□□□□ -0.23
RTF1-201ENST00000389629 PNLIPRP1P54315 467 aa13.63□□□□□ -0.23
RTF1-201ENST00000389629 DSG2Q14126 1118 aa13.63□□□□□ -0.23
RTF1-201ENST00000389629 LINC00299Q6ZSB3 139 aa13.63□□□□□ -0.23
RTF1-201ENST00000389629 IL20RAQ9UHF4 553 aa13.63□□□□□ -0.23
RTF1-201ENST00000389629 SCN9AQ15858 1988 aa13.63□□□□□ -0.23
RTF1-201ENST00000389629 A8MUA0 341 aa13.63□□□□□ -0.23
RTF1-201ENST00000389629 KCNK2O95069 426 aa13.63□□□□□ -0.23
RTF1-201ENST00000389629 MRPL3P09001 348 aaKnown RBP13.63□□□□□ -0.23
RTF1-201ENST00000389629 HOXC13P31276 330 aa13.63□□□□□ -0.23
RTF1-201ENST00000389629 UGT2B10P36537 528 aa13.63□□□□□ -0.23
RTF1-201ENST00000389629 RPS5P46782 204 aaKnown RBP13.63□□□□□ -0.23
RTF1-201ENST00000389629 FADDQ13158 208 aa13.63□□□□□ -0.23
RTF1-201ENST00000389629 LARS2Q15031 903 aaKnown RBP13.63□□□□□ -0.23
RTF1-201ENST00000389629 WASH2PQ6VEQ5 465 aa13.63□□□□□ -0.23
RTF1-201ENST00000389629 PHYKPLQ8IUZ5 450 aa13.63□□□□□ -0.23
RTF1-201ENST00000389629 DUSP21Q9H596 190 aa13.63□□□□□ -0.23
RTF1-201ENST00000389629 TRIM36Q9NQ86 728 aa13.63□□□□□ -0.23
RTF1-201ENST00000389629 MYADML2A6NDP7 307 aa13.62□□□□□ -0.23
RTF1-201ENST00000389629 SLC19A2O60779 497 aa13.62□□□□□ -0.23
RTF1-201ENST00000389629 RHCEP18577 417 aa13.62□□□□□ -0.23
RTF1-201ENST00000389629 GATMP50440 423 aa13.62□□□□□ -0.23
RTF1-201ENST00000389629 SCRN3Q0VDG4 424 aa13.62□□□□□ -0.23
RTF1-201ENST00000389629 CAMK1Q14012 370 aa13.62□□□□□ -0.23
RTF1-201ENST00000389629 LIPJQ5W064 366 aa13.62□□□□□ -0.23
RTF1-201ENST00000389629 Q6ZVU0 165 aa13.62□□□□□ -0.23
RTF1-201ENST00000389629 DCAF4L2Q8NA75 395 aa13.62□□□□□ -0.23
RTF1-201ENST00000389629 KLHDC9Q8NEP7 349 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms