RNA–Protein interactions for RNA: ENST00000384438.1

RNU6-1340P-201, Transcript of RNA, U6 small nuclear 1340, pseudogene, humanhuman

BASIC

Gene RNU6-1340P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1340P-201ENST00000384438 VTI1BQ9UEU0 232 aa-2.68□□□□□ -2.84
RNU6-1340P-201ENST00000384438 LCMT1Q9UIC8 334 aa-2.68□□□□□ -2.84
RNU6-1340P-201ENST00000384438 YARS2Q9Y2Z4 477 aaKnown RBP-2.68□□□□□ -2.84
RNU6-1340P-201ENST00000384438 KIAA1671Q9BY89 1806 aa-2.68□□□□□ -2.84
RNU6-1340P-201ENST00000384438 DNAH8Q96JB1 4490 aa-2.68□□□□□ -2.84
RNU6-1340P-201ENST00000384438 USP42Q9H9J4 1324 aaKnown RBP-2.68□□□□□ -2.84
RNU6-1340P-201ENST00000384438 DSCAML1Q8TD84 2053 aa-2.69□□□□□ -2.84
RNU6-1340P-201ENST00000384438 IGHV1OR15-1A0A075B7D0 117 aa-2.69□□□□□ -2.84
RNU6-1340P-201ENST00000384438 TEX48A0A1B0GUV7 120 aa-2.69□□□□□ -2.84
RNU6-1340P-201ENST00000384438 A0A1B0GVI7 797 aa-2.69□□□□□ -2.84
RNU6-1340P-201ENST00000384438 GJE1A6NN92 205 aa-2.69□□□□□ -2.84
RNU6-1340P-201ENST00000384438 SGTAO43765 313 aa-2.69□□□□□ -2.84
RNU6-1340P-201ENST00000384438 SS18L1O75177 396 aaPredicted RBP-2.69□□□□□ -2.84
RNU6-1340P-201ENST00000384438 AVILO75366 819 aa-2.69□□□□□ -2.84
RNU6-1340P-201ENST00000384438 PRKRAO75569 313 aaKnown RBP-2.69□□□□□ -2.84
RNU6-1340P-201ENST00000384438 CDK2AP2O75956 126 aa-2.69□□□□□ -2.84
RNU6-1340P-201ENST00000384438 MLYCDO95822 493 aa-2.69□□□□□ -2.84
RNU6-1340P-201ENST00000384438 U2AF1L5P0DN76 240 aaPredicted RBP-2.69□□□□□ -2.84
RNU6-1340P-201ENST00000384438 LAMP1P11279 417 aa-2.69□□□□□ -2.84
RNU6-1340P-201ENST00000384438 MALP21145 153 aa-2.69□□□□□ -2.84
RNU6-1340P-201ENST00000384438 DRD1P21728 446 aa-2.69□□□□□ -2.84
RNU6-1340P-201ENST00000384438 IL2RGP31785 369 aa-2.69□□□□□ -2.84
RNU6-1340P-201ENST00000384438 EIF2S3P41091 472 aaKnown RBP-2.69□□□□□ -2.84
RNU6-1340P-201ENST00000384438 ALDH3B1P43353 468 aa-2.69□□□□□ -2.84
RNU6-1340P-201ENST00000384438 TRAPPC10P48553 1259 aa-2.69□□□□□ -2.84
RNU6-1340P-201ENST00000384438 U2AF1Q01081 240 aaKnown RBP eCLIP-2.69□□□□□ -2.84
RNU6-1340P-201ENST00000384438 PRKCZQ05513 592 aa-2.69□□□□□ -2.84
RNU6-1340P-201ENST00000384438 IFT88Q13099 833 aa-2.69□□□□□ -2.84
RNU6-1340P-201ENST00000384438 CUL4BQ13620 913 aa-2.69□□□□□ -2.84
RNU6-1340P-201ENST00000384438 ALCAMQ13740 583 aa-2.69□□□□□ -2.84
RNU6-1340P-201ENST00000384438 ARFRP1Q13795 201 aa-2.69□□□□□ -2.84
RNU6-1340P-201ENST00000384438 HEPACAMQ14CZ8 416 aa-2.69□□□□□ -2.84
RNU6-1340P-201ENST00000384438 NAB2Q15742 525 aa-2.69□□□□□ -2.84
RNU6-1340P-201ENST00000384438 EXOC3L2Q2M3D2 409 aa-2.69□□□□□ -2.84
RNU6-1340P-201ENST00000384438 P3H1Q32P28 736 aa-2.69□□□□□ -2.84
RNU6-1340P-201ENST00000384438 SLC10A6Q3KNW5 377 aa-2.69□□□□□ -2.84
RNU6-1340P-201ENST00000384438 MMEL1Q495T6 779 aa-2.69□□□□□ -2.84
RNU6-1340P-201ENST00000384438 RAB6CQ53S08 254 aa-2.69□□□□□ -2.84
RNU6-1340P-201ENST00000384438 SLC25A53Q5H9E4 307 aa-2.69□□□□□ -2.84
RNU6-1340P-201ENST00000384438 THEMIS2Q5TEJ8 643 aa-2.69□□□□□ -2.84
RNU6-1340P-201ENST00000384438 LRRC8EQ6NSJ5 796 aa-2.69□□□□□ -2.84
RNU6-1340P-201ENST00000384438 SLC30A9Q6PML9 568 aa-2.69□□□□□ -2.84
RNU6-1340P-201ENST00000384438 C15orf52Q6ZUT6 534 aaKnown RBP-2.69□□□□□ -2.84
RNU6-1340P-201ENST00000384438 CCDC80Q76M96 950 aa-2.69□□□□□ -2.84
RNU6-1340P-201ENST00000384438 R3HCC1LQ7Z5L2 792 aaKnown RBP-2.69□□□□□ -2.84
RNU6-1340P-201ENST00000384438 ARHGAP12Q8IWW6 846 aa-2.69□□□□□ -2.84
RNU6-1340P-201ENST00000384438 GPR65Q8IYL9 337 aa-2.69□□□□□ -2.84
RNU6-1340P-201ENST00000384438 ZNF100Q8IYN0 542 aa-2.69□□□□□ -2.84
RNU6-1340P-201ENST00000384438 PCDH20Q8N6Y1 951 aaKnown RBP-2.69□□□□□ -2.84
RNU6-1340P-201ENST00000384438 TMEM105Q8N8V8 129 aa-2.69□□□□□ -2.84
RNU6-1340P-201ENST00000384438 APPL2Q8NEU8 664 aa-2.69□□□□□ -2.84
RNU6-1340P-201ENST00000384438 B3GNT7Q8NFL0 401 aa-2.69□□□□□ -2.84
RNU6-1340P-201ENST00000384438 HMGCLL1Q8TB92 370 aa-2.69□□□□□ -2.84
RNU6-1340P-201ENST00000384438 SPACA4Q8TDM5 124 aa-2.69□□□□□ -2.84
RNU6-1340P-201ENST00000384438 TMBIM1Q969X1 311 aa-2.69□□□□□ -2.84
RNU6-1340P-201ENST00000384438 C5orf30Q96GV9 206 aa-2.69□□□□□ -2.84
RNU6-1340P-201ENST00000384438 DNAJC30Q96LL9 226 aa-2.69□□□□□ -2.84
RNU6-1340P-201ENST00000384438 GPR137Q96N19 417 aa-2.69□□□□□ -2.84
RNU6-1340P-201ENST00000384438 MBOAT7Q96N66 472 aa-2.69□□□□□ -2.84
RNU6-1340P-201ENST00000384438 YME1L1Q96TA2 773 aa-2.69□□□□□ -2.84
RNU6-1340P-201ENST00000384438 COQ7Q99807 217 aa-2.69□□□□□ -2.84
RNU6-1340P-201ENST00000384438 C7orf25Q9BPX7 421 aa-2.69□□□□□ -2.84
RNU6-1340P-201ENST00000384438 RAB6CQ9H0N0 254 aa-2.69□□□□□ -2.84
RNU6-1340P-201ENST00000384438 FAM49AQ9H0Q0 323 aaPredicted RBP-2.69□□□□□ -2.84
RNU6-1340P-201ENST00000384438 Q9H3A6 140 aa-2.69□□□□□ -2.84
RNU6-1340P-201ENST00000384438 DPEP2Q9H4A9 486 aa-2.69□□□□□ -2.84
RNU6-1340P-201ENST00000384438 ACKR4Q9NPB9 350 aa-2.69□□□□□ -2.84
RNU6-1340P-201ENST00000384438 LTB4R2Q9NPC1 389 aa-2.69□□□□□ -2.84
RNU6-1340P-201ENST00000384438 DMAP1Q9NPF5 467 aaPredicted RBP-2.69□□□□□ -2.84
RNU6-1340P-201ENST00000384438 SDR39U1Q9NRG7 319 aaPredicted RBP-2.69□□□□□ -2.84
RNU6-1340P-201ENST00000384438 TDP1Q9NUW8 608 aa-2.69□□□□□ -2.84
RNU6-1340P-201ENST00000384438 OXSMQ9NWU1 459 aa-2.69□□□□□ -2.84
RNU6-1340P-201ENST00000384438 SLCO1C1Q9NYB5 712 aa-2.69□□□□□ -2.84
RNU6-1340P-201ENST00000384438 EHD2Q9NZN4 543 aa-2.69□□□□□ -2.84
RNU6-1340P-201ENST00000384438 RCOR3Q9P2K3 495 aaPredicted RBP-2.69□□□□□ -2.84
RNU6-1340P-201ENST00000384438 PILRAQ9UKJ1 303 aa-2.69□□□□□ -2.84
RNU6-1340P-201ENST00000384438 ADAM28Q9UKQ2 775 aa-2.69□□□□□ -2.84
RNU6-1340P-201ENST00000384438 WDR45Q9Y484 360 aa-2.69□□□□□ -2.84
RNU6-1340P-201ENST00000384438 FLVCR1Q9Y5Y0 555 aa-2.69□□□□□ -2.84
RNU6-1340P-201ENST00000384438 MTCH2Q9Y6C9 303 aa-2.69□□□□□ -2.84
RNU6-1340P-201ENST00000384438 CEP290O15078 2479 aa-2.69□□□□□ -2.84
RNU6-1340P-201ENST00000384438 WDR90Q96KV7 1748 aa-2.7□□□□□ -2.84
RNU6-1340P-201ENST00000384438 AHDC1Q5TGY3 1603 aaPredicted RBP-2.7□□□□□ -2.84
RNU6-1340P-201ENST00000384438 A0A0J9YXY3 114 aa-2.7□□□□□ -2.84
RNU6-1340P-201ENST00000384438 MBLAC1A4D2B0 266 aaPredicted RBP-2.7□□□□□ -2.84
RNU6-1340P-201ENST00000384438 ERICH4A6NGS2 130 aa-2.7□□□□□ -2.84
RNU6-1340P-201ENST00000384438 C17orf100A8MU93 164 aa-2.7□□□□□ -2.84
RNU6-1340P-201ENST00000384438 RNF103O00237 685 aa-2.7□□□□□ -2.84
RNU6-1340P-201ENST00000384438 BUD23O43709 281 aaKnown RBP-2.7□□□□□ -2.84
RNU6-1340P-201ENST00000384438 USO1O60763 962 aaKnown RBP-2.7□□□□□ -2.84
RNU6-1340P-201ENST00000384438 GLRA3O75311 464 aa-2.7□□□□□ -2.84
RNU6-1340P-201ENST00000384438 TRIM3O75382 744 aaPredicted RBP-2.7□□□□□ -2.84
RNU6-1340P-201ENST00000384438 KRT75O95678 551 aa-2.7□□□□□ -2.84
RNU6-1340P-201ENST00000384438 TRUB2O95900 331 aaKnown RBP-2.7□□□□□ -2.84
RNU6-1340P-201ENST00000384438 OPN1LWP04000 364 aa-2.7□□□□□ -2.84
RNU6-1340P-201ENST00000384438 GRPP07492 148 aa-2.7□□□□□ -2.84
RNU6-1340P-201ENST00000384438 ADRB2P07550 413 aa-2.7□□□□□ -2.84
RNU6-1340P-201ENST00000384438 G6PDP11413 515 aa-2.7□□□□□ -2.84
RNU6-1340P-201ENST00000384438 RPA2P15927 270 aa-2.7□□□□□ -2.84
RNU6-1340P-201ENST00000384438 CENPAP49450 140 aa-2.7□□□□□ -2.84
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms