RNA–Protein interactions for RNA: ENST00000381208.9

RPAIN-202, Transcript of RPA interacting protein, humanhuman

TSL 1 (best) BASIC

Gene RPAIN, Length 1,394 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-202ENST00000381208 SLC15A4Q8N697 577 aa12.05□□□□□ -0.48
RPAIN-202ENST00000381208 TEX9Q8N6V9 391 aa12.05□□□□□ -0.48
RPAIN-202ENST00000381208 SLC2A12Q8TD20 617 aa12.05□□□□□ -0.48
RPAIN-202ENST00000381208 MAPKAP1Q9BPZ7 522 aa12.05□□□□□ -0.48
RPAIN-202ENST00000381208 FAM173AQ9BQD7 235 aa12.05□□□□□ -0.48
RPAIN-202ENST00000381208 RPF2Q9H7B2 306 aaKnown RBP12.05□□□□□ -0.48
RPAIN-202ENST00000381208 ZDHHC11Q9H8X9 412 aa12.05□□□□□ -0.48
RPAIN-202ENST00000381208 ACTR8Q9H981 624 aa12.05□□□□□ -0.48
RPAIN-202ENST00000381208 IGSF5Q9NSI5 407 aa12.05□□□□□ -0.48
RPAIN-202ENST00000381208 SACM1LQ9NTJ5 587 aa12.05□□□□□ -0.48
RPAIN-202ENST00000381208 APCP25054 2843 aa12.04□□□□□ -0.48
RPAIN-202ENST00000381208 H0YIV9 168 aa12.04□□□□□ -0.48
RPAIN-202ENST00000381208 WWP2O00308 870 aa12.04□□□□□ -0.48
RPAIN-202ENST00000381208 ADAM10O14672 748 aa12.04□□□□□ -0.48
RPAIN-202ENST00000381208 BCKDKO14874 412 aa12.04□□□□□ -0.48
RPAIN-202ENST00000381208 PRKNO60260 465 aaPredicted RBP12.04□□□□□ -0.48
RPAIN-202ENST00000381208 CDC40O60508 579 aaKnown RBP eCLIP12.04□□□□□ -0.48
RPAIN-202ENST00000381208 LDB3O75112 727 aa12.04□□□□□ -0.48
RPAIN-202ENST00000381208 OR6B1O95007 311 aa12.04□□□□□ -0.48
RPAIN-202ENST00000381208 C2P06681 752 aa12.04□□□□□ -0.48
RPAIN-202ENST00000381208 MTHFD2P13995 350 aa12.04□□□□□ -0.48
RPAIN-202ENST00000381208 SOX3P41225 446 aa12.04□□□□□ -0.48
RPAIN-202ENST00000381208 GPR85P60893 370 aa12.04□□□□□ -0.48
RPAIN-202ENST00000381208 PPIAP62937 165 aaKnown RBP12.04□□□□□ -0.48
RPAIN-202ENST00000381208 GUCY2DQ02846 1103 aa12.04□□□□□ -0.48
RPAIN-202ENST00000381208 DLG1Q12959 904 aa12.04□□□□□ -0.48
RPAIN-202ENST00000381208 SLAMF1Q13291 335 aa12.04□□□□□ -0.48
RPAIN-202ENST00000381208 SETDB1Q15047 1291 aa12.04□□□□□ -0.48
RPAIN-202ENST00000381208 PCBP2Q15366 365 aaKnown RBP eCLIP12.04□□□□□ -0.48
RPAIN-202ENST00000381208 ZDHHC24Q6UX98 284 aa12.04□□□□□ -0.48
RPAIN-202ENST00000381208 ACAD11Q709F0 780 aa12.04□□□□□ -0.48
RPAIN-202ENST00000381208 FGD2Q7Z6J4 655 aa12.04□□□□□ -0.48
RPAIN-202ENST00000381208 GPR180Q86V85 440 aa12.04□□□□□ -0.48
RPAIN-202ENST00000381208 CD163Q86VB7 1156 aa12.04□□□□□ -0.48
RPAIN-202ENST00000381208 OR2M7Q8NG81 312 aa12.04□□□□□ -0.48
RPAIN-202ENST00000381208 HUS1BQ8NHY5 278 aa12.04□□□□□ -0.48
RPAIN-202ENST00000381208 SLC22A8Q8TCC7 542 aa12.04□□□□□ -0.48
RPAIN-202ENST00000381208 ANKRD9Q96BM1 317 aaPredicted RBP12.04□□□□□ -0.48
RPAIN-202ENST00000381208 SDCCAG3Q96C92 435 aa12.04□□□□□ -0.48
RPAIN-202ENST00000381208 NXNL1Q96CM4 212 aa12.04□□□□□ -0.48
RPAIN-202ENST00000381208 C14orf79Q96F83 325 aa12.04□□□□□ -0.48
RPAIN-202ENST00000381208 WDR41Q9HAD4 459 aa12.04□□□□□ -0.48
RPAIN-202ENST00000381208 IL1RL2Q9HB29 575 aa12.04□□□□□ -0.48
RPAIN-202ENST00000381208 DMRT3Q9NQL9 472 aa12.04□□□□□ -0.48
RPAIN-202ENST00000381208 LYARQ9NX58 379 aaKnown RBP12.04□□□□□ -0.48
RPAIN-202ENST00000381208 TMCO1Q9UM00 188 aa12.04□□□□□ -0.48
RPAIN-202ENST00000381208 RTCAO00442 366 aaKnown RBP12.03□□□□□ -0.48
RPAIN-202ENST00000381208 KLK8O60259 260 aa12.03□□□□□ -0.48
RPAIN-202ENST00000381208 FAM155BO75949 473 aa12.03□□□□□ -0.48
RPAIN-202ENST00000381208 KLHL2O95198 593 aa12.03□□□□□ -0.48
RPAIN-202ENST00000381208 P04436 131 aa12.03□□□□□ -0.48
RPAIN-202ENST00000381208 CAPN3P20807 821 aa12.03□□□□□ -0.48
RPAIN-202ENST00000381208 TYK2P29597 1187 aa12.03□□□□□ -0.48
RPAIN-202ENST00000381208 CHRNB4P30926 498 aa12.03□□□□□ -0.48
RPAIN-202ENST00000381208 GALNSP34059 522 aa12.03□□□□□ -0.48
RPAIN-202ENST00000381208 RFC3P40938 356 aa12.03□□□□□ -0.48
RPAIN-202ENST00000381208 SERPINB8P50452 374 aa12.03□□□□□ -0.48
RPAIN-202ENST00000381208 TNFRSF17Q02223 184 aa12.03□□□□□ -0.48
RPAIN-202ENST00000381208 CUL3Q13618 768 aa12.03□□□□□ -0.48
RPAIN-202ENST00000381208 PFKFB4Q16877 469 aa12.03□□□□□ -0.48
RPAIN-202ENST00000381208 HYAL4Q2M3T9 481 aa12.03□□□□□ -0.48
RPAIN-202ENST00000381208 PIGGQ5H8A4 983 aa12.03□□□□□ -0.48
RPAIN-202ENST00000381208 MROH9Q5TGP6 573 aa12.03□□□□□ -0.48
RPAIN-202ENST00000381208 C8orf74Q6P047 294 aa12.03□□□□□ -0.48
RPAIN-202ENST00000381208 SYT10Q6XYQ8 523 aa12.03□□□□□ -0.48
RPAIN-202ENST00000381208 MYLK4Q86YV6 388 aaPredicted RBP12.03□□□□□ -0.48
RPAIN-202ENST00000381208 ST13P4Q8IZP2 240 aaPredicted RBP12.03□□□□□ -0.48
RPAIN-202ENST00000381208 CENPLQ8N0S6 344 aaPredicted RBP12.03□□□□□ -0.48
RPAIN-202ENST00000381208 FAM109AQ8N4B1 249 aa12.03□□□□□ -0.48
RPAIN-202ENST00000381208 ZNF721Q8TF20 911 aa12.03□□□□□ -0.48
RPAIN-202ENST00000381208 CHTF18Q8WVB6 975 aa12.03□□□□□ -0.48
RPAIN-202ENST00000381208 KCTD4Q8WVF5 259 aa12.03□□□□□ -0.48
RPAIN-202ENST00000381208 RND1Q92730 232 aa12.03□□□□□ -0.48
RPAIN-202ENST00000381208 SENP5Q96HI0 755 aaPredicted RBP12.03□□□□□ -0.48
RPAIN-202ENST00000381208 FBXL20Q96IG2 436 aa12.03□□□□□ -0.48
RPAIN-202ENST00000381208 SCYL1Q96KG9 808 aa12.03□□□□□ -0.48
RPAIN-202ENST00000381208 TRIM8Q9BZR9 551 aa12.03□□□□□ -0.48
RPAIN-202ENST00000381208 ENKD1Q9H0I2 346 aa12.03□□□□□ -0.48
RPAIN-202ENST00000381208 OR51B5Q9H339 312 aa12.03□□□□□ -0.48
RPAIN-202ENST00000381208 SNX15Q9NRS6 342 aa12.03□□□□□ -0.48
RPAIN-202ENST00000381208 MTRF1LQ9UGC7 380 aaKnown RBP12.03□□□□□ -0.48
RPAIN-202ENST00000381208 CSMD1Q96PZ7 3565 aa12.02□□□□□ -0.49
RPAIN-202ENST00000381208 DNAJC13O75165 2243 aa12.02□□□□□ -0.49
RPAIN-202ENST00000381208 A0A096LPK6 155 aa12.02□□□□□ -0.49
RPAIN-202ENST00000381208 IQANK1A0A1B0GTG1 560 aa12.02□□□□□ -0.49
RPAIN-202ENST00000381208 FIGNL2A6NMB9 653 aa12.02□□□□□ -0.49
RPAIN-202ENST00000381208 FOXO6A8MYZ6 492 aa12.02□□□□□ -0.49
RPAIN-202ENST00000381208 FOXE1O00358 373 aaPredicted RBP12.02□□□□□ -0.49
RPAIN-202ENST00000381208 FGF17O60258 216 aa12.02□□□□□ -0.49
RPAIN-202ENST00000381208 GLSO94925 669 aaPredicted RBP12.02□□□□□ -0.49
RPAIN-202ENST00000381208 IGHG3P01860 377 aa12.02□□□□□ -0.49
RPAIN-202ENST00000381208 IGKV3-11P04433 115 aa12.02□□□□□ -0.49
RPAIN-202ENST00000381208 HOXD4P09016 255 aaPredicted RBP12.02□□□□□ -0.49
RPAIN-202ENST00000381208 RBP1P09455 135 aa12.02□□□□□ -0.49
RPAIN-202ENST00000381208 ALOX15P16050 662 aaPredicted RBP12.02□□□□□ -0.49
RPAIN-202ENST00000381208 PRSS12P56730 875 aa12.02□□□□□ -0.49
RPAIN-202ENST00000381208 DDX39BQ13838 428 aaKnown RBP12.02□□□□□ -0.49
RPAIN-202ENST00000381208 GTF2H2Q13888 395 aa12.02□□□□□ -0.49
RPAIN-202ENST00000381208 SPRED3Q2MJR0 410 aa12.02□□□□□ -0.49
RPAIN-202ENST00000381208 GTF2H2CQ6P1K8 395 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms