RNA–Protein interactions for RNA: ENST00000380748.5

HMGN1-203, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3 BASIC

Gene HMGN1, Length 829 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-203ENST00000380748 FOXF2Q12947 444 aa15.88■□□□□ 0.13
HMGN1-203ENST00000380748 DCST1Q5T197 706 aa15.88■□□□□ 0.13
HMGN1-203ENST00000380748 CAND1Q86VP6 1230 aaKnown RBP15.88■□□□□ 0.13
HMGN1-203ENST00000380748 C9orf40Q8IXQ3 194 aa15.88■□□□□ 0.13
HMGN1-203ENST00000380748 FAM13CQ8NE31 585 aa15.88■□□□□ 0.13
HMGN1-203ENST00000380748 SLC22A8Q8TCC7 542 aa15.88■□□□□ 0.13
HMGN1-203ENST00000380748 ATL1Q8WXF7 558 aa15.88■□□□□ 0.13
HMGN1-203ENST00000380748 CCT6BQ92526 530 aa15.88■□□□□ 0.13
HMGN1-203ENST00000380748 DOHHQ9BU89 302 aa15.88■□□□□ 0.13
HMGN1-203ENST00000380748 C20orf96Q9NUD7 363 aaPredicted RBP15.88■□□□□ 0.13
HMGN1-203ENST00000380748 COPS7AQ9UBW8 275 aa15.88■□□□□ 0.13
HMGN1-203ENST00000380748 CNOT11Q9UKZ1 510 aaKnown RBP15.88■□□□□ 0.13
HMGN1-203ENST00000380748 MED12Q93074 2177 aa15.87■□□□□ 0.13
HMGN1-203ENST00000380748 DSCAMO60469 2012 aa15.87■□□□□ 0.13
HMGN1-203ENST00000380748 LRIT2A6NDA9 550 aa15.87■□□□□ 0.13
HMGN1-203ENST00000380748 TRAPPC6AO75865 159 aa15.87■□□□□ 0.13
HMGN1-203ENST00000380748 TMIGD3P0DMS9 266 aaPredicted RBP15.87■□□□□ 0.13
HMGN1-203ENST00000380748 NID1P14543 1247 aa15.87■□□□□ 0.13
HMGN1-203ENST00000380748 PGGT1BP53609 377 aa15.87■□□□□ 0.13
HMGN1-203ENST00000380748 TBL3Q12788 808 aaKnown RBP15.87■□□□□ 0.13
HMGN1-203ENST00000380748 RBM20Q5T481 1227 aaKnown RBP15.87■□□□□ 0.13
HMGN1-203ENST00000380748 ANKRD22Q5VYY1 191 aa15.87■□□□□ 0.13
HMGN1-203ENST00000380748 ARMC3Q5W041 872 aa15.87■□□□□ 0.13
HMGN1-203ENST00000380748 HMBOX1Q6NT76 420 aa15.87■□□□□ 0.13
HMGN1-203ENST00000380748 GSTA5Q7RTV2 222 aa15.87■□□□□ 0.13
HMGN1-203ENST00000380748 KIAA1328Q86T90 577 aa15.87■□□□□ 0.13
HMGN1-203ENST00000380748 THOC6Q86W42 341 aaKnown RBP15.87■□□□□ 0.13
HMGN1-203ENST00000380748 NUBPLQ8TB37 319 aa15.87■□□□□ 0.13
HMGN1-203ENST00000380748 TAS2R13Q9NYV9 303 aa15.87■□□□□ 0.13
HMGN1-203ENST00000380748 DAPP1Q9UN19 280 aa15.87■□□□□ 0.13
HMGN1-203ENST00000380748 TESMINQ9Y4I5 508 aa15.87■□□□□ 0.13
HMGN1-203ENST00000380748 CAPN6Q9Y6Q1 641 aa15.87■□□□□ 0.13
HMGN1-203ENST00000380748 TRIM3O75382 744 aaPredicted RBP15.86■□□□□ 0.13
HMGN1-203ENST00000380748 ACSL3O95573 720 aa15.86■□□□□ 0.13
HMGN1-203ENST00000380748 C1QAP02745 245 aa15.86■□□□□ 0.13
HMGN1-203ENST00000380748 SOX18P35713 384 aa15.86■□□□□ 0.13
HMGN1-203ENST00000380748 KCNJ1P48048 391 aa15.86■□□□□ 0.13
HMGN1-203ENST00000380748 SF3B4Q15427 424 aaKnown RBP eCLIP15.86■□□□□ 0.132e-7■■■■□ 20.5
HMGN1-203ENST00000380748 ACKR1Q16570 336 aa15.86■□□□□ 0.13
HMGN1-203ENST00000380748 CCNG2Q16589 344 aa15.86■□□□□ 0.13
HMGN1-203ENST00000380748 VASNQ6EMK4 673 aa15.86■□□□□ 0.13
HMGN1-203ENST00000380748 SYDE1Q6ZW31 735 aaPredicted RBP15.86■□□□□ 0.13
HMGN1-203ENST00000380748 WDYHV1Q96HA8 205 aa15.86■□□□□ 0.13
HMGN1-203ENST00000380748 ZNF597Q96LX8 424 aa15.86■□□□□ 0.13
HMGN1-203ENST00000380748 TRIM54Q9BYV2 358 aa15.86■□□□□ 0.13
HMGN1-203ENST00000380748 CNIH4Q9P003 139 aa15.86■□□□□ 0.13
HMGN1-203ENST00000380748 IKZF3Q9UKT9 509 aa15.86■□□□□ 0.13
HMGN1-203ENST00000380748 SLC22A14Q9Y267 594 aa15.86■□□□□ 0.13
HMGN1-203ENST00000380748 MAD1L1Q9Y6D9 718 aa15.86■□□□□ 0.13
HMGN1-203ENST00000380748 A0A088AWK7 358 aa15.85■□□□□ 0.13
HMGN1-203ENST00000380748 DEFB108AA8MXU0 73 aa15.85■□□□□ 0.13
HMGN1-203ENST00000380748 HRKO00198 91 aa15.85■□□□□ 0.13
HMGN1-203ENST00000380748 TBX6O95947 436 aaPredicted RBP15.85■□□□□ 0.13
HMGN1-203ENST00000380748 FBXO45P0C2W1 286 aa15.85■□□□□ 0.13
HMGN1-203ENST00000380748 FPR1P21462 350 aa15.85■□□□□ 0.13
HMGN1-203ENST00000380748 ZNF10P21506 573 aaPredicted RBP15.85■□□□□ 0.13
HMGN1-203ENST00000380748 SLCO1A2P46721 670 aa15.85■□□□□ 0.13
HMGN1-203ENST00000380748 SERTAD2Q14140 314 aa15.85■□□□□ 0.13
HMGN1-203ENST00000380748 EFTUD2Q15029 972 aaKnown RBP eCLIP15.85■□□□□ 0.132e-22■■■■■ 48.1
HMGN1-203ENST00000380748 TRIP13Q15645 432 aaPredicted RBP15.85■□□□□ 0.13
HMGN1-203ENST00000380748 HSP90AA5PQ58FG0 334 aa15.85■□□□□ 0.13
HMGN1-203ENST00000380748 LMNTD2Q8IXW0 634 aa15.85■□□□□ 0.13
HMGN1-203ENST00000380748 GABPB2Q8TAK5 448 aaPredicted RBP15.85■□□□□ 0.13
HMGN1-203ENST00000380748 CALML6Q8TD86 181 aa15.85■□□□□ 0.13
HMGN1-203ENST00000380748 SERINC2Q96SA4 455 aa15.85■□□□□ 0.13
HMGN1-203ENST00000380748 UGT2B28Q9BY64 529 aa15.85■□□□□ 0.13
HMGN1-203ENST00000380748 GSX2Q9BZM3 304 aa15.85■□□□□ 0.13
HMGN1-203ENST00000380748 CALHM2Q9HA72 323 aa15.85■□□□□ 0.13
HMGN1-203ENST00000380748 IARS2Q9NSE4 1012 aaKnown RBP15.85■□□□□ 0.13
HMGN1-203ENST00000380748 ROS1P08922 2347 aa15.84■□□□□ 0.13
HMGN1-203ENST00000380748 SDR42E2A6NKP2 422 aa15.84■□□□□ 0.13
HMGN1-203ENST00000380748 CTIFO43310 598 aaKnown RBP15.84■□□□□ 0.13
HMGN1-203ENST00000380748 PTH2RP49190 550 aa15.84■□□□□ 0.13
HMGN1-203ENST00000380748 VPS41P49754 854 aa15.84■□□□□ 0.13
HMGN1-203ENST00000380748 CDK9P50750 372 aaKnown RBP15.84■□□□□ 0.13
HMGN1-203ENST00000380748 MTTPP55157 894 aa15.84■□□□□ 0.13
HMGN1-203ENST00000380748 IL2P60568 153 aa15.84■□□□□ 0.13
HMGN1-203ENST00000380748 SARNPP82979 210 aaKnown RBP15.84■□□□□ 0.13
HMGN1-203ENST00000380748 SLBPQ14493 270 aaKnown RBP eCLIP15.84■□□□□ 0.13
HMGN1-203ENST00000380748 EIPR1Q53HC9 387 aa15.84■□□□□ 0.13
HMGN1-203ENST00000380748 BICRALQ6AI39 1079 aa15.84■□□□□ 0.13
HMGN1-203ENST00000380748 TRIM40Q6P9F5 258 aa15.84■□□□□ 0.13
HMGN1-203ENST00000380748 DRICH1Q6PGQ1 229 aaPredicted RBP15.84■□□□□ 0.13
HMGN1-203ENST00000380748 AGGF1Q8N302 714 aaeCLIP15.84■□□□□ 0.13
HMGN1-203ENST00000380748 SLC15A4Q8N697 577 aa15.84■□□□□ 0.13
HMGN1-203ENST00000380748 RNF214Q8ND24 703 aa15.84■□□□□ 0.13
HMGN1-203ENST00000380748 OR2L5Q8NG80 312 aa15.84■□□□□ 0.13
HMGN1-203ENST00000380748 SLC44A1Q8WWI5 657 aa15.84■□□□□ 0.13
HMGN1-203ENST00000380748 ANKRD9Q96BM1 317 aaPredicted RBP15.84■□□□□ 0.13
HMGN1-203ENST00000380748 PIK3IP1Q96FE7 263 aa15.84■□□□□ 0.13
HMGN1-203ENST00000380748 SENP5Q96HI0 755 aaPredicted RBP15.84■□□□□ 0.13
HMGN1-203ENST00000380748 FAM167BQ9BTA0 163 aa15.84■□□□□ 0.13
HMGN1-203ENST00000380748 SFXN3Q9BWM7 321 aa15.84■□□□□ 0.13
HMGN1-203ENST00000380748 REXO4Q9GZR2 422 aaKnown RBP15.84■□□□□ 0.13
HMGN1-203ENST00000380748 UBQLN3Q9H347 655 aa15.84■□□□□ 0.13
HMGN1-203ENST00000380748 NDRG3Q9UGV2 375 aa15.84■□□□□ 0.13
HMGN1-203ENST00000380748 KCNE2Q9Y6J6 123 aa15.84■□□□□ 0.13
HMGN1-203ENST00000380748 USF3Q68DE3 2245 aa15.84■□□□□ 0.13
HMGN1-203ENST00000380748 RAI1Q7Z5J4 1906 aaPredicted RBP15.84■□□□□ 0.13
HMGN1-203ENST00000380748 MAGEB16A2A368 324 aa15.83■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms